Cololabis saira (Pacific saury): 133427756
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Entry
133427756 CDS
T09849
Symbol
tcea3
Name
(RefSeq) transcription elongation factor A protein 3 isoform X1
KO
K03145
transcription elongation factor S-II
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csai03021
]
133427756 (tcea3)
Transcription machinery [BR:
csai03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
133427756 (tcea3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Med26
Zn_ribbon_TFIIS
HVO_0758
Motif
Other DBs
NCBI-GeneID:
133427756
NCBI-ProteinID:
XP_061572476
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All DBs
Position
3:21194038..21206138
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AA seq
749 aa
AA seq
DB search
MTQEEDLIRIAKKLDKMVSRNNTDGALDLLKELKAFNMTLKLLQETRIGMSVNSIRKHCT
DEEVIALAKVLIKDWKRLLDAGCSHPEKVPETKNGLDSKSSAAPNCPPSEAKSSHRRLDV
KTKPDSDPNKKYSDKYRKEKQNDDHINTRDPEDEMHLKDLRNEKHLQEKGERQTFTENPK
VERDNKKQEHAQDPWSGKHKLDHQMKDGAIEKKKMRHLEKLKREKHPEELKKYGYDVKKD
KDRGESRHDRPANAPQRERPLTEPQREKPADVHRPMFERRGVLDSSILYPTRFPSPPRPA
RPPLPVKRPSLDQKKDRRDSKESEHPRPHAPKPTSPPAKRPAEEVKKERKVPPDPNAPIA
PLPLHLHPPPARKMPPDPNAPLPPLPLHLHPPPPTPKRPSLDVKKEKDCRKLSTDSKLPA
QKKSADAVKTDRKNSVDSKVPKKHSDEAKRERKDSSESKPPPPKQPCAEVKKEKHRKDSC
DSKSGQVTKHLSTDSKPERWESNDLKKSSSPPAKKLIMGESLFHRRESLGSKPTQPGPPQ
RKLSTDCIERKSKAETPRTPTTPTSPMSPSFASPGGPLPPHLSTGDSVRDKCVEMLAAAL
RTDDDYKVFGSNCDSMGAEIEDHIYQEIKATDMKYKNRVRSRISNLKDPKNPGLRKNVLA
GAIELRRIATMSAEEMASDELKQLRNVLTQEAIREHQMAKTGGTTTDLLQCGKCRKKNVT
YNQVQTRSADEPMTTFCLCNECGNRWKFC
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgactcaagaagaagacctcatccggatcgctaaaaaactagacaagatggtgtctaga
aataacacggatggagccttggacctgctgaaagagctgaaggccttcaacatgacacta
aaacttctccaggaaacgagaattggaatgtctgtgaacagtatcaggaaacactgcaca
gatgaagaagtcattgccttggcaaaagtcctcattaaagactggaagagacttctggat
gctggctgttctcacccggagaaagtgcctgaaacaaagaatggtttggactcaaaatcg
tcagcagctccaaactgccccccctctgaggcaaaaagcagtcacaggaggctggatgtc
aaaacaaaacctgactcagaccctaacaaaaagtactctgataaatacagaaaagaaaaa
cagaatgatgaccacataaacaccagggaccccgaggacgaaatgcacctcaaggacctc
agaaatgagaaacatcttcaagaaaaaggggagaggcaaacattcacggaaaatcccaag
gtggagcgggataataagaagcaggagcatgcacaagacccgtggagtggaaaacacaag
ttagatcatcaaatgaaagacggagcaatagaaaaaaagaagatgaggcacttggagaag
ctgaagagagagaaacacccagaggaattaaagaagtatggatatgatgtgaagaaggac
aaagacagaggagaaagcagacacgacaggccggccaacgcgcctcagcgagagagaccg
ctgactgaaccccagagagagaaacctgccgatgttcacagacccatgtttgaaaggaga
ggagtgctggacagcagcattctgtatcccacccgcttcccctcccctcctcgacctgct
cgaccgccgttgcccgtcaaacgtccgtctttggaccagaaaaaagacagaagggacagc
aaagaatctgaacatcctcgtcctcatgcacctaaaccaacctccccgccagctaaacga
cctgcagaagaagtaaagaaagagaggaaagttccgccagacccaaatgctccaatagct
cctcttcctcttcaccttcatcctcctccagcaagaaagatgcctccagaccccaacgct
cctcttcctccgcttcctcttcaccttcaccctcctcctcctacaccgaagcgtccctca
ctggatgtgaaaaaggagaaagactgcaggaaattgtccacagactcgaagcttcctgca
cagaaaaagtctgcagatgctgtgaagacagacaggaaaaactcagtggatagcaaagtg
cctaaaaaacactcagatgaagccaagagagaaaggaaagattcatccgagtccaaacct
cctcctccaaaacagccctgcgctgaggtcaaaaaagaaaaacacaggaaggattcctgt
gactcaaagtctggccaagttaccaaacacctttcaactgacagcaaacctgagagatgg
gagtccaatgatttgaaaaaaagcagttcaccgccagcaaagaagctcatcatgggtgaa
agcttgtttcacaggagagagtcgctcggctcgaagcctacgcagcccggacctccgcag
aggaagctctccaccgactgcattgaaaggaaaagtaaagcagaaacgcccagaactccc
accaccccgaccagccccatgtcgcccagctttgcttcacctggggggccgctgccccct
cacctgtccaccggagactccgtcagagacaagtgcgtggagatgctggcagctgccctg
cgcacagacgatgattacaaagtttttggatctaactgtgacagcatgggagcagagatt
gaagatcatatctaccaggagatcaaagccaccgatatgaagtacaagaacagagtgcgg
agccgcatcagcaacttgaaggaccccaagaacccggggcttcgcaaaaatgtcctcgcg
ggagccatcgagctaagacgcatcgccaccatgtctgccgaggaaatggccagtgacgag
ctgaaacagctgaggaacgttctcacccaggaggccatcagggagcaccagatggccaaa
actggtggcaccaccacagacctgctgcagtgcggcaagtgcaggaagaagaacgtcacc
tacaaccaggttcagacacgcagtgctgatgagccaatgactacattttgtctgtgcaac
gagtgtggaaatcggtggaaattctgctga
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