Cololabis saira (Pacific saury): 133427918
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Entry
133427918 CDS
T09849
Name
(RefSeq) transcription factor HIVEP3
KO
K09239
human immunodeficiency virus type I enhancer-binding protein
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133427918
Transcription factors [BR:
csai03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
133427918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
NOA36
zf-C2H2_16
zf-met
zf-H2C2_5
TFIIIA_zf-C2H2
Motif
Other DBs
NCBI-GeneID:
133427918
NCBI-ProteinID:
XP_061572492
LinkDB
All DBs
Position
3:complement(21299876..21348891)
Genome browser
AA seq
1989 aa
AA seq
DB search
MEAEPSRPADGDRSGRQGQQHVTAESSFESCPPEQPQQPPNPRPVHRALGRLQHRQPRRT
DLLRLQQQQAAVWQHSDALNPSGGSFYSTASSSLPSTSSTQAEHGHGAPSHSSQESQESI
SSPRKGEKKPQKTGKYVCTYCGRPCAKPSVLQKHIRSHTGERPYPCTPCGFSFKTKSNLY
KHRKSHAHRIRAGMASSRDEPEASGVVEDPEEHTDGESTESEEETGQHRKSSSKEMPRPK
KGDKEQLGGSEEPQRPEDSQAVKQRLALRLSERKRGPMASPDDHPSSLSTSSSSIGPGSK
GSTESGYFSGSGSTDLSQVSPPSSSGKTYAEIILGKYGRLGGQQRSPHQQQPHSSHSSSS
GTEEKSIPFSVPKTQVIEHITKLITINEAVVDTSEIDSVKPRRSSLSRKSSMESPKCITP
KDPYTFDPKGEAAGPSGLRHLQNPAAGAQELSAVPLLRSHSMPSTTSQPEPFTSGTMSPR
GYRLCQSFDEQQAVVAEMRGAQRTLRRQPAIEDPQGAELTLEETRHASLSSSARVIESGK
QPQQQQQQKCPGALQCGTCGARFQHSGAYEAHRGICPVQEQEEVSQTTREDRPLMMHYKF
RALAMAVRKRRKEESLEDDPPSPGAVPMSGSSAGLISVPSRPEHSQALSGVILQTEPNQQ
QQQDRKGVSVIQHTSSFEKQESISMESQEPDLRENQQTQEPEPKPSPSTSRLIRQPNIQV
PEILVTVELDADMPSVSPPVAASSSKEAERVEEFQWPQRSQTLAQLPAEKLPPKKKRLRL
AEAAQSSGGSSFESPSLPRSPSHESNISSHSASFEDTARSEPTIWASSSQSSQMLMVPSA
SHQYHQSHKEMRRSCSEQAPASPQQTQESAETRSKSFDYGSLSSQQPTCSWKERRKCLLV
KHATLGESEQEVGSNINQLSRSESPKPGPSHSSHPPLYSADLSSQFHLESTAKALQTLPS
QFFPSSQDLLPFQPGVQHAFPPGSLSQLLPVTTTISEILSTQVLHRAILHSQTGSSPIQI
HSSHIHMAEQRIPLPHLSPLVPFAFSPRTRAGQTLYLSVPSRLPTHAPSPSTTVSRPSTS
SMSSDLAQQSVVTISYHYPRPVIVTCLAQLTPAVSLVVPVRLQTHRPTFASAMYTTLSQI
LASTPSQEPTSCTAMVIMGQVDRHTLQRTYLKVPTPDIKSLLPLTLPTELASGSGEGYGP
LGAGGSKRMLSPAASLELSTEAQRHQKRVKEEEEEEQHKTREEEDEELKESREEESKATG
AKLDEEEKKHPDRVDMATEKLEEVQDKVTKNNKRDKQEGQRESTQKTIQKKEEVPTVEAG
VERPSTPSYPNLHTSTSVNWCYLKYVKPNPSVQRDPRTSVYSTWSISAHNPNLPGLSTKV
ALSLLCSKQRHSSAIYTMATALTQTKGNLAPASHKTTHVSEVHATSPSTVTEVKSQQKHE
KEDNKETREEEGPSTSKPGESSRVRIFEGGYKSNEEYVYVRGRGRGKYICGECGIRCKKP
SMLKKHIRTHTDVRPYICKHCNFAFKTKGNLTKHMKSKAHGKKCQAMGVSESSLDEPESE
ETAGSDERVCGSEEQDDHQFSDVEESDNDEDDDEEEDEEEESASHEDPLSSCSSDTHPSA
GGHSSGGRRSQQGTPDPEPSPGRDQPSPRGVWPSRRAASPGSRRALFSRRGWKASPRGFS
PSSESCPPSRSLSPRLELSSPMHSLSPRTELSTPSQHVSPSPERGPSPIRPLSPLRPISP
SCYRPSQVRTPPSPLRLYHRTSGYLPWESPGTKGGHFKLEKTGTAGEESSSFPAAFRLSS
SEAYPGLQTTENIFSHLPMHSQQAKVPYLMIPIGGIQIVQARPRSHPTTPSSPTSPPLEG
PSLARHESYWGGTPRTQGLRTPGSYWSEYQVAGTSQAVQHSLTTAVTLSKADLKTTDSKQ
YGSSHSSIHTHRSASKTTKHSARDGGTRAPGLSIADPVALRAIEQESEREELPSGSGVVE
GEAEGEQST
NT seq
5970 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgagcccagccgtccggctgatggggatcgctctggaaggcaagggcagcag
catgtgacagctgagtcttcatttgaatcttgtccacctgagcagccccagcagcctcct
aatcctcgtcctgtacacagagccttgggccgcctacaacatcgccaacccagacgtact
gacctgcttcgattacagcaacagcaagcagcagtatggcagcattcggatgccctaaac
ccctcagggggcagcttctactctacagcctcctcatccctcccttctacttcctccacc
caggctgagcatggtcatggggcgccatctcactccagccaagagagtcaagaaagtatt
agttcccccagaaagggggaaaagaaaccacagaaaacagggaaatatgtctgcacgtac
tgtggacgtccatgtgccaagccaagtgttcttcaaaaacacatacgctcccatacagga
gaaagaccctacccttgtactccctgtgggttttccttcaagaccaagagtaacctatac
aagcaccgcaagtcccatgcccatcgcattagagcaggtatggcttctagtcgtgacgaa
ccagaggcaagtggtgttgtggaagaccccgaggaacacacagacggagaaagtactgag
tctgaggaagagacaggtcagcatagaaaatcctcctctaaagagatgcccagaccgaag
aaaggggacaaagaacagctgggaggctcagaggagccccaaaggcccgaagactcccag
gctgtgaagcaaagactggccttgaggcttagtgaaagaaaacgaggtcctatggcatct
ccagatgaccatccttcctctctctccacctcatcttcttccataggaccaggtagtaaa
ggcagcacagagtctgggtatttctctggatcaggaagtactgacttgtcccaagttagc
ccaccaagttccagtggcaaaacctacgcagaaattattttagggaagtatggaagactg
ggaggccagcaacgcagtccccaccaacaacagcctcattcttcacattcctcttcctca
ggaactgaggagaagagcattcccttctctgtgcccaaaacccaagtcatagaacacatt
accaagctcataactattaatgaggcagtagtagacaccagtgaaattgacagtgttaag
cccagacgctcatctctgtcccggaagagcagcatggagtcacccaaatgtatcacccca
aaagatccatacacatttgatcccaaaggagaagctgcaggccccagtggtttgaggcat
ctccaaaaccctgcggcaggtgcacaggaactgtcagcagtgcctcttcttagaagccac
tcaatgccatcaactaccagccaaccagaacccttcacctctggcaccatgtctcctaga
ggttaccgcctctgccagtcattcgatgagcaacaagcagtggtcgcagagatgaggggt
gcccagcgtacactcagacgccagcccgccatagaggatccccagggagcagagctaaca
ttggaggagacccgacacgcctccttgtcctcttcagccagagttattgaatcagggaag
cagccacagcaacaacaacagcaaaagtgtcccggggcattacagtgtggaacatgcggg
gcccgctttcaacacagtggagcgtacgaggctcacagaggcatctgcccagtgcaggaa
caagaggaagtcagtcaaacaaccagggaggatcggcccctgatgatgcactataagttc
agagcactggccatggctgtgaggaagaggaggaaagaggagagtttggaggatgatcct
cccagccctggagctgtacccatgtcaggaagctctgcaggcctcatttcagtgccaagt
agaccagagcacagccaagccctctcaggtgttattttacagactgagccaaatcaacag
cagcagcaggacaggaagggtgtgtctgtcatccaacacactagctcttttgagaaacag
gagagtatatctatggaaagccaggaaccagacctcagagagaatcagcaaacacaagaa
cccgagccaaaaccatctccgtccacatcacgcctcatccgccagccaaacattcaagtg
ccggagatccttgttactgtggagcttgatgctgacatgccatctgtgtcacccccggta
gcagcatcttcttccaaggaggccgagagagtagaggaattccagtggcctcagcgtagc
cagactctggcccagcttcctgctgagaagctgccaccaaagaagaaaagactccgtctg
gcagaagctgcacagtcctccggggggtctagctttgagtctccgtctctgcctcgtagt
ccaagtcacgaaagcaacatctcaagtcattctgcttcatttgaagatactgcacgttca
gagccaactatctgggcttctagcagccaaagctctcagatgcttatggtgccatctgcc
tctcaccaataccaccaaagtcacaaggagatgaggcgttcgtgttcagagcaggcccca
gccagcccacaacaaacacaagagagtgcagagaccagaagtaagtcatttgactatgga
tccctttcctctcagcagcccacatgctcctggaaagaaaggaggaagtgtcttcttgtg
aaacacgccaccttaggtgaatccgagcaggaggtggggagcaacattaatcagttgtcc
agatcagaaagtcccaaacctggtccttcccactctagccatcctcctctctactcagct
gatctgagctcccaatttcaccttgaatcaacagcaaaggccttgcaaacattaccatca
caattctttccatcctctcaggatctcctcccttttcagcctggagtccaacatgctttc
cctccaggatcactatcacagctactacctgttaccacaaccatatcggaaatactatcc
acccaagtcctccacagggccattttgcattcgcaaacaggatcttcacctatacagatt
cactcgtctcatatccacatggcagaacagagaataccactgcctcacctttctccccta
gttcctttcgccttctcccccaggactagagctggccagactctgtatttgtctgttcct
tcgagacttcccacacatgctccttccccatccactacagtgagcagaccttccacctct
tccatgtcctctgacctcgcccagcaatctgttgtaaccatctcttaccactacccaagg
ccagtcattgtcacatgtttggcacagctcacaccagcagtgtcccttgtggtgccagtg
cgcctccagactcatcgacctacctttgccagtgccatgtatactactctgtcccagatt
ttggcttccactccttcacaggagccaacttcttgcacagctatggtcatcatgggccag
gtagatcgacacacactgcaaaggacataccttaaagtacccaccccagatatcaagagt
cttctacccctgactttgccaacggagctggcctcaggttctggggagggatacggtcca
ctgggagctggaggaagcaaacgaatgctttctcctgcagccagccttgagctcagcaca
gaagctcaacgtcaccagaaaagggtgaaggaggaagaggaggaggagcaacataaaaca
agggaggaagaggatgaagaactgaaagaaagccgggaagaagaaagtaaagccactggg
gcaaaactggatgaagaagaaaagaagcacccagacagggtagacatggcaactgagaaa
ttagaagaggtacaagacaaagtaacaaagaataacaaaagggacaaacaggagggacag
agggagtcaactcagaaaacaattcaaaaaaaggaagaggtgccaactgtagaggcgggg
gttgagagaccaagtaccccttcataccccaacctccacacctccacctcagtcaactgg
tgctatctgaagtatgtcaaacctaacccatctgtgcagcgagaccctcgtacctcagtc
tattctacatggagcatcagtgctcacaaccccaacttgccgggcctcagcacaaaagtg
gccctttctctactgtgctccaaacagaggcacagctctgcgatatacacaatggcgacc
gccctgacacaaaccaaaggaaacctggcacctgcgagccacaagacaacacatgtgtct
gaggtacatgccacctcacccagcaccgtcactgaagtaaagagtcagcagaagcatgaa
aaggaggataataaagagacgagagaagaggaaggaccttccacctccaaaccgggcgag
tcttctcgggttcgcatctttgaaggcgggtacaagtccaatgaggagtatgtctatgtg
agaggtcgggggcgaggcaagtacatatgtggagaatgtgggattcgctgcaagaagccc
agcatgctgaaaaagcacatcagaacgcacaccgacgtccgtccatacatttgtaaacac
tgcaactttgccttcaagaccaaaggaaaccttacaaaacacatgaagtcaaaggctcat
gggaaaaaatgccaggcaatgggagtctctgagtcatcactggacgagccagagagcgaa
gaaacagctggaagcgatgaacgtgtgtgtggctcggaggagcaggacgaccatcagttt
tctgacgtggaggaatcggacaatgacgaagatgatgatgaggaggaggacgaggaagag
gaatctgcatctcacgaagacccactatcctcctgttcgtcggacacccacccatcagca
gggggtcactccagcgggggtcggcgctcccaacagggcactcctgaccctgagcccagt
cccggccgtgatcagccctccccgaggggagtctggcccagcaggcgagcggcatcgccc
ggtagcaggagagcactgttctcccggcgaggttggaaagcgtcaccgagagggttctcc
cccagcagcgagagctgcccccccagccgcagtctctccccccgcctggagctgtcctcg
cccatgcacagcctctctcccaggaccgagctctctactccctctcaacacgtgtcaccc
tctcccgagagagggccgtctcccatcagacctctttctcctcttcgtcccatttcaccc
agctgctaccggccatctcaagttcgaacccctccgtcgccgctgagattgtatcacaga
acctctggatacttaccctgggagagccctggcactaaaggaggtcacttcaaactggag
aaaactggtaccgcaggagaagaaagcagctcctttccagctgcttttcgtctttcctcc
agtgaggcttatcctggccttcagacaacagagaacatcttcagccatcttcccatgcac
tcccaacaagccaaggtcccctatctaatgataccaattggtggtattcaaatcgtacag
gccagaccacggtcccacccgactacaccgtcatctccaacatctccaccactcgagggg
ccgtctctggctcgccatgaatcatactggggcgggacccctaggactcaagggcttagg
actcctggaagctactggtcagagtaccaggtagcaggaaccagccaggcggtgcagcac
agtcttactacagcagtgacactttccaaagcagatttgaagaccacggactcaaagcaa
tatggcagctcacatagctccatccacacccacaggtctgcgagcaaaaccaccaaacac
agcgccagagacggtggtacaagagcacccggcctcagcatagcagaccctgtagcgctg
cgtgccatcgaacaggagtcggagagggaggagttaccgtcgggtagcggtgtggtggag
ggagaagcggaaggagagcagagcacttga
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integrated database retrieval system