Cololabis saira (Pacific saury): 133428185
Help
Entry
133428185 CDS
T09849
Symbol
si:zfos-323e3.4
Name
(RefSeq) volume-regulated anion channel subunit LRRC8C
KO
K22038
volume-regulated anion channel
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csai04040
]
133428185 (si:zfos-323e3.4)
Ion channels [BR:
csai04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
133428185 (si:zfos-323e3.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_1
LRR_5
LRR_13
LRR_EndoS
LRR_R13L1-DRL21
LRR_6
LRR_9
DUF4248
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
133428185
NCBI-ProteinID:
XP_061572519
LinkDB
All DBs
Position
1:18395739..18405007
Genome browser
AA seq
809 aa
AA seq
DB search
MIPVGEFKSLGTEQNSQFRVLKPWWDVFSEYLCVSMLMIGVFGCTLQLTQEKIACLPSHF
TSPRPELINCSHISSYRDNETSHNTLGIPGNPTLTEVFGRKNNLDIHQYVFVNHYCYERY
VHWYAKYFPYLVVIHTMIFMIASGFWFKFPGTSSKIDIFVTVLGKCFDSPWTTRALSEVS
EERGEEKLVSLRKNTMSKNPAELAKDEEESVGLLRSASVKSNPEKKSPEPQSALSVLDKK
EGEQAKALFEKVKKFRTHVEEGEILYHMYVLQTSIKVFKFLVIIIYTAVLVPNIEIVVHC
FVPPELTGFDIYCCNHTKAHLFSKLAYCYICFVGVYGLMCVYTLYWLFHRSLKEYSFEHV
RLETGINDIPDMKNDFAFLLHLVDQYDTLYSKRFAVFLSEVSESRLHQLNLNHEWTVKKL
RGRLARNSGNRLELHLLMLPGLPDTLFELAEVESLKLEQVNNVTIPASVVKLDSLQELAL
IYCPAKLQHSALNYLKEHLKVLRLSFESLEEAPLWMYTLHNLEELHLTGPLTSDVSKSAS
LESLRVLRALRLLTLRSSLRKIPPSVGDLASQLQRLCIYNEGVKLQAFSSLKKLTNLISL
ELVGCELERIPSAVFSLNNLQELDLRENKLTTVEEILSLQHCRRLATLRLWHNSITYIPE
HISKLCTLETLDVSWNKLRKLPSRLFYCTKLRHLDVSHNQLTSLPPEVSIPQGLQFFSAA
FNSLESLPDELFSCKRLKTLLLGNNCLSSLGSRVANLAQLVRLDVKGNRLESLPLEIGDC
PLLRCSGLIVEDSLLDLLPSDIRNKLTQS
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgatccccgttggtgaattcaaaagcctcgggacggagcaaaattcccagttccgggtg
ctgaaaccgtggtgggatgtcttctcggagtacctgtgcgtctccatgctcatgattggg
gtctttgggtgcacattacagctcacccaggagaagatcgcgtgtctccccagccacttc
accagcccgaggccagagttgatcaactgcagccacatcagcagctacagggacaacgag
acttcgcacaacacgctgggcatacccgggaaccccaccctcacggaggtgttcggtcgc
aaaaacaacctggacattcaccagtacgtgtttgtcaaccactactgctatgagaggtac
gtccactggtacgccaagtacttcccgtacctggttgtgatccacaccatgatcttcatg
atagccagcggcttctggttcaagttccccgggacgtcttctaaaattgacatttttgtg
accgtcttggggaagtgcttcgactcgccctggaccacgagggccctgagcgaagtttct
gaggagagaggcgaggagaagctggtcagcttgaggaagaacaccatgtcgaagaatcca
gcggagctagcaaaagatgaggaagaatcggtggggcttttgcgctccgcgtccgtcaag
tctaacccggagaagaaaagcccggagccccagtctgctctctcagtgctggacaagaag
gagggagagcaagccaaagctctttttgaaaaggtgaagaagttcagaactcacgtggag
gaaggagagatcctgtaccacatgtacgtgttacaaacatcaataaaagtcttcaagttc
ctcgttatcatcatctacaccgcggtgctggtgccaaacattgaaatagttgtgcactgt
ttcgtcccgcccgagctgactggttttgatatctactgttgcaaccacaccaaggcccat
ctcttctccaagctcgcctactgctacatctgctttgtgggggtgtacggactcatgtgc
gtctacaccctgtactggctcttccatcgctcgctgaaggagtattccttcgagcacgtc
cgtttggagacggggattaacgacataccggacatgaagaacgacttcgccttccttctc
cacctggtggatcagtacgacaccctttactccaaaagattcgccgtcttcctctcggag
gtcagcgagagccgcctgcaccagctcaacctcaaccacgagtggaccgttaaaaagctg
cgcggccgtctcgcgaggaactcggggaaccggctggagcttcacctgctgatgctgccg
gggctccccgacacccttttcgagctggccgaggtggaatcgctcaaactggagcaggtc
aacaacgtcaccatcccagccagcgtggtgaagctggactccctgcaggagctggcgttg
atctactgccccgccaagctgcagcactcggccctcaactacctcaaggagcatttgaag
gtcttacgcttgtctttcgagagtctagaggaggccccgttgtggatgtacacccttcac
aacctggaggagttgcacctgaccggtccgctgaccagcgacgtgtccaagagcgccagc
ctggagtcgttgcgggtgctgagagcgttgaggctcctgacgctgcgctcaagcctgagg
aagatcccacccagcgtgggagatctggcctcccagttacagcggctgtgcatctacaac
gaaggggtgaagctccaggcgttcagcagcctgaagaagctgacgaacctcatttcgctg
gagttggtgggctgcgagctggagcgcatcccgagcgccgtgttcagcctcaacaacctg
caggagctggacctgagggagaacaagctgacgaccgtggaggagatcctgagtctgcag
cactgccggcgcctggccacgctgcggctgtggcacaacagcatcacgtacatccccgaa
cacatcagcaagctgtgcaccctggagacgctggacgtcagctggaacaagctgcggaag
ctcccctcgcggctcttctactgcaccaagctcaggcacctggacgtctcccacaaccag
ctcacctcgctgccccccgaggtcagcatcccgcagggcctgcagttcttctccgccgcg
ttcaactcgctggagtcgctgccggacgagctgttctcctgcaaaagactgaagacgctg
ctgctcgggaacaactgcctctcgagcctcggctccagggtggccaacctggcccagctg
gtgcggctggacgtcaaggggaaccggctggagtccctccctctggagataggagactgt
cccctgctgagatgcagcggcttgatagtggaggacagccttttagatctcctgccttcg
gatatacgaaacaagttgactcagagctga
DBGET
integrated database retrieval system
