Cololabis saira (Pacific saury): 133429710
Help
Entry
133429710 CDS
T09849
Symbol
hacl1
Name
(RefSeq) 2-hydroxyacyl-CoA lyase 1
KO
K12261
2-hydroxyacyl-CoA lyase [EC:
4.1.2.63
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
133429710 (hacl1)
Enzymes [BR:
csai01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.63 2-hydroxyacyl-CoA lyase
133429710 (hacl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPP_enzyme_M
TPP_enzyme_N
TPP_enzyme_C
Motif
Other DBs
NCBI-GeneID:
133429710
NCBI-ProteinID:
XP_061572638
LinkDB
All DBs
Position
3:23495044..23505341
Genome browser
AA seq
568 aa
AA seq
DB search
MDEVTGAELIAESLKTQKVEYMFGIVGVPIIEVAMAAQAAGIKYVGMRNEQAACYAASAI
GYITGRPGACLVVSGPGLIHALGGMANANMNCWPVIVIGGSSDRNQETAGAFQEFPQVEA
CRLYSKFSARPSCLEAIPSVIEKAVRTSIYGRPGACYVDIAGDMVNAKVDRIKVRDVPCC
PPPPVSLADHSAVTKAISVLKAAKTPLVIIGKGAAYGKAETVLRQFVEMSGLPFLPTPMG
KGVLPDDHPNCVAAARSRALLEADVVLLLGARLNWILHFGLPPRFNPKVKIIQVDLCAEE
MGNNLRPAVALLGDISAIVNQLLMCVQKDGWKYPSNTEWWGVLQKKMAANAQMSRSLALK
TTLPMNYYTVFHHISQLLPHDCVIVSEGANTMDIGRTMLNNYLPRHRLDAGTFGTMGVGL
GFAIAAAAVEKSCNEGKRVVCVEGDSAFGFSGMEVETMCRYNLPVIIIVVNNNGIYSGMD
AETWKEMATMGDLTSLAPVACLLPDARYDEVMTAFGGRGFLVRTVEELRSALELSLSDWE
RPSLLNVLIDPSSDRKQQEFPWLTRSNL
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagtgacaggcgccgagctaatagcggagtctctgaagactcagaaagttgaa
tacatgttcgggatagttggtgttcctatcattgaagtggccatggctgctcaggctgct
gggatcaaatacgtagggatgcgcaacgaacaggcggcgtgctatgcagcctctgccatt
ggatacattactgggagaccaggtgcctgcctggtggtgtctggacctggactcattcat
gctctgggtgggatggccaacgcaaacatgaactgctggccagtgattgttattggaggg
tcctcagatcgaaaccaggaaacagcaggagcctttcaggagtttcctcaggtagaggca
tgccgcctgtacagcaagttttctgcaagacccagctgtctagaagccatcccctcagtc
atagagaaggccgtccgcacaagcatatatggacgtccaggtgcttgttacgtggatatt
gcaggggacatggtcaatgccaaagtggacaggatcaaagtccgagacgtgccatgctgt
ccccctccaccagtgagtttggctgaccacagtgcagtcacaaaggccatttctgtcctc
aaagcagccaagacacctttggtaatcattggcaaaggagcagcttatggcaaagcagag
actgtgctgaggcagtttgtggaaatgagcggcctgccgttcctgcccaccccgatgggg
aaaggagtcctacctgatgatcatcccaactgtgtggctgccgcccgctcaagagccctt
cttgaggctgatgttgtgcttctccttggagccagactcaactggatcctacattttggt
ctgccacccagatttaaccccaaagttaagatcatccaggtcgacctgtgtgctgaggag
atgggtaacaatctgaggccagctgttgctcttctgggagacatcagcgctatcgtcaat
cagctcctgatgtgtgtccagaaagacggctggaaatatccctctaatacggagtggtgg
ggcgtgctgcagaagaagatggctgccaatgcacaaatgtcaagatcgcttgctcttaag
acaactttgcccatgaactactacacagtgtttcatcacatttctcaactgctgccacat
gactgcgtcattgtcagcgagggggccaacacaatggacattgggcgtacgatgctgaat
aattacctgcctcgacacaggttggatgcgggcacctttggaacaatgggagtaggcctt
gggtttgcaatagcagcagctgctgtggagaagagctgcaacgaaggaaaaagggtcgtg
tgtgtggaaggagacagtgcattcggattttctggcatggaagttgagaccatgtgcaga
tacaacctgcctgtgatcattattgtggttaataacaatgggatatacagtggaatggat
gctgagacatggaaagaaatggcaacaatgggagatctgacctctctagcccctgttgcc
tgcctgttacccgacgcccgttacgatgaggtcatgacagcatttggaggtcgagggttt
ctggtgaggacggtggaggagctgcgcagcgccttagagctcagcctgagtgactgggaa
agacccagtctcctcaacgtgcttattgatccttcatcagacagaaaacaacaggagttt
ccttggctcacgcgctccaacctctag
DBGET
integrated database retrieval system
