Cololabis saira (Pacific saury): 133430812
Help
Entry
133430812 CDS
T09849
Name
(RefSeq) DENN domain-containing protein 3-like isoform X1
KO
K20162
DENN domain-containing protein 3
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133430812
Membrane trafficking [BR:
csai04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
133430812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
WDR55
WD40_Prp19
WD40_WDHD1_1st
uDENN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
dDENN
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
133430812
NCBI-ProteinID:
XP_061572739
LinkDB
All DBs
Position
3:complement(24692247..24713874)
Genome browser
AA seq
1271 aa
AA seq
DB search
MADYLVPAILEACVVVGASGDKLQEVCQTLNDAGGPEPMLLEPEVLHVLAPPFISRPQAD
TDVPKRAKRRRSFLRKKREQPNLATATQGGGVPEGRGANEDVSVPKDIDLMALPQLCFPG
GLQVTNEQKNEQFHYLVFTDVFGNKTYGVVMQYYRPILEGTSYQNGAGSSQISKLFSAYG
FCIISKYPYFTALKDCLSCLLNQLRICRLSDMEERVKEFAAKLTLVPIPPPGQLHLMFTL
RPLTITLPSREDKDHPAIDLELHLPLLCLRPQQLLQVLSCLLQEQRVVLFSADWARLTLV
AESLLIFLQPLSWQHPYVPVLARSMLDFVMAPTAFLMGCHLSHFSEVAAETDDLILVNID
DGSVSTSSSDTVDLPDIPSSAADCFTQRCRSLSIHFDLDQCHSASCTDINEQRAQRRAWQ
HSLNHDIQRIALELIVNLFRDVSSHLNYAHRVFHSEQFLKTREPAEQLFYKKVLETHIFH
SFLRDRLNKQMDNFTRMEVGTRSAIYKMKAMIEVPRRPTMQEIQAKRKTSSMENKLSKRL
GMSLPNLGEDQTLSFPRNPLLSRIMMPDTALRTAPKPVKVFKLADFPVSLSFHSVQSYYS
EVIQQLGKDIFSVQNENSSLLARFYYLRGFINMLCSRRVDALSDFQNLYKTDTAIFPTHL
VTLLVDSLHRDERQQAQRRPELKRLLFKVKTDNEKPLVQTDNHVKKFQLPRIPLHQDEFV
RCIQECGIVKDVATIRRLFDALTDGQLKEIDPELFRVFYTFWKEAEAEAQDVNLPSEVIN
QLDNSECVYKLSSSVKTSHGVGKIAMTQKRLFLLTEGQPGFVEITKFREIQSVKIASAPF
LLVRIPSLRIQTASRPEVFEANLKTETELWNLVVKEMWAGRKMADQHKDPQYMTQALTNV
LLMDAVVGCLQTQRSISAATKLAYFDKIKYEVPMMVPKTTSETLKHKINPSLDLVEPQTV
HVLLYTPGQLTCNDLQGEMNPKLWVALSGGRVVVFDAASWSMLQDSIQVGETQVTCMIGL
VQEQVWIGSQDSVIYIIDTHSMSCNKQLTDHRNEVTGLSVDTRDHHGSQYTYSCSCDGTI
LQWDSSSLKVRRQFHLSCDRLSSMQIHDGTLWCCCSDSIVELRKSGAPHRRITLPDDLRS
MPSSFSCFILVPERGQLWTGCSDSEELCLWQVNNHKYPSKRISLPGCSGVTCMIRVKNQI
WVGCRGRSGVGGQCDDQLRSQVLVVDPDSLTVAKELQAHSDTIQTLCSAEDRYVMSGSAR
RDGKIAIWKVE
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggcggactatctggttcctgcgatactggaagcctgtgtggtggtgggagcatccggg
gacaaacttcaggaagtctgccagactcttaacgatgccggaggtccagagccgatgctc
ttggagccggaggttcttcatgttctggcacctcccttcatcagcagacctcaagctgat
actgatgtgccgaaacgtgccaagcgacgacgctcctttcttaggaaaaagagggaacaa
cctaatttagctacagcaactcaaggtgggggtgtgccagaaggaagaggagcgaatgaa
gatgtcagtgtgccaaaagacatcgaccttatggctttgcctcagctctgcttccctggt
ggcctgcaagtgaccaatgaacagaaaaatgagcaatttcactaccttgttttcacggat
gtcttcggtaacaagacctatggagtagtaatgcagtactaccgtccaatactggaagga
acttcctatcaaaatggagctgggtcttctcagatttcaaaacttttctctgcttacggt
ttctgtatcatatccaagtatccttacttcactgctctaaaagactgtctgtcatgtctt
ttgaatcagctgagaatttgcaggttatcagacatggaggagagagtgaaggaatttgca
gctaaactgacactcgtgccaattccaccacctggacaactacatttgatgtttacgttg
cgtcctttgaccatcacgttaccatccagagaggacaaagaccacccagcgatagacttg
gagctacacctgcctcttctttgcctcaggccgcaacagctactgcaggtactatcctgt
ctcctgcaggagcagcgagttgtgttattttctgctgactgggccagactcactctggtg
gcagagagcttgttgattttccttcagccactgtcatggcagcatccttatgtccctgtc
ttggccagaagcatgctggactttgttatggctccaactgcctttctcatgggatgccat
ctcagccatttttcagaggttgctgctgaaaccgatgatttaatcttagttaatatcgat
gatggaagtgtttccacctcatcttctgatactgttgacttacctgacattccttcatca
gctgcagattgcttcacacagagatgccggtcactgtcgatacattttgacttggatcag
tgtcacagtgcgagctgcactgacatcaatgagcagcgtgcacagagaagagcctggcaa
cacagcctcaatcatgacatccaaaggattgcgctggaactgattgtcaacttattcagg
gatgttagcagtcatctgaattatgcacatcgagtgtttcatagtgaacagttcttaaaa
acaagagaaccagctgagcaacttttctacaagaaggtgttggagacacacatcttccac
tctttcctcagggatcgtctcaacaagcagatggataacttcacacgaatggaagttggc
actcgttctgcgatttacaaaatgaaggccatgattgaagtaccacgcaggcccaccatg
caggagatccaagccaagagaaagacttccagcatggaaaacaagctcagtaagagactg
gggatgagtctgcccaacttgggggaagaccaaaccctcagcttcccaagaaacccactt
ctctccagaatcatgatgccggacacggcgttaaggacagctcctaagcccgtaaaggtg
tttaaacttgcggacttccccgtgtctctgtctttccactctgtccagagttactacagt
gaagtcatccaacagcttggaaaagatattttttctgtccaaaatgagaattcctctctc
cttgccagattttactacctgcgtggtttcatcaacatgctgtgttcgaggcgagtggac
gctctgagtgatttccagaatctgtacaagaccgacactgccattttccccacacacttg
gtcacactgcttgtggactcacttcaccgcgatgagaggcagcaagcccagagacgaccc
gaactcaagagactcctcttcaaggtgaagacggataatgagaagccactggtccagact
gacaaccacgtcaagaagtttcaacttccacgaattcctctgcatcaggatgagtttgtg
cgttgcattcaggaatgtggaattgttaaagatgtggcaacaatacggcgtttatttgat
gctctcactgatggccaactaaaggagatagaccctgaacttttcagagtcttctacact
ttctggaaggaggccgaagccgaagcgcaagacgtcaacctgccctctgaggtcatcaac
cagcttgacaacagtgaatgtgtctacaagttatcgtctagtgtcaagacctcccatggt
gttggcaaaatcgccatgacgcagaaacgtctgtttttgcttactgagggacaaccaggg
tttgtggaaatcacaaagttcagagaaattcagagcgtgaagattgcctctgctcctttt
ctacttgttcgcatcccctcccttcgtatccagacggccagcaggcctgaggtgtttgag
gccaatctgaagacggagactgaactctggaaccttgtggtcaaagagatgtgggctgga
cgcaagatggcagaccaacacaaggaccctcagtacatgactcaggctctgaccaatgtc
ttgttgatggatgctgttgttggctgtctgcagactcaaaggtccatctctgctgccaca
aagctcgcttattttgataaaatcaagtatgaagtgcccatgatggtgcctaaaactacc
tcagagactctaaagcataagatcaacccgtccctggacctggttgaacctcagacggta
catgtgctgctatacacaccaggtcagctgacctgcaatgatttgcagggtgagatgaac
cctaaactgtgggtggctctcagtggtggcagagtggtggtatttgatgcagccagttgg
tcgatgctgcaggactccatccaggttggagagacacaagtgacctgcatgattggactg
gtccaggagcaggtgtggatcggttctcaggactctgtcatctacatcattgacactcac
agcatgtcctgcaataaacagttgactgatcacagaaatgaagtgacaggcctctcagtg
gacaccagggatcatcacggcagtcagtacacgtactcctgcagctgtgatggaacaatc
ctgcaatgggactcgtccagtcttaaagtgaggagacagttccacctcagctgtgaccgt
ctctcttccatgcagatccatgatggcaccctgtggtgctgctgtagtgacagtattgtg
gaactgagaaagagtggtgcaccacacaggagaataactctgcctgatgacctgcggagc
atgcccagtagcttcagctgctttattctcgtcccggagcgagggcagttgtggactggc
tgctcagactcggaggagttgtgtctctggcaggtgaacaaccacaaatatccatccaag
agaatctccctgcccggctgctcaggagtcacctgtatgattcgcgtcaaaaaccagatc
tgggtgggctgcagaggacggagcggtgttggaggtcagtgtgatgatcaactaagaagc
caggtgttggtggtggacccagacagtctcacggtggcaaaggagctacaggctcattca
gacaccattcagacgctctgctctgcagaggatcgctatgtcatgagtggctctgcgcgg
cgtgatggcaagatcgccatctggaaagttgaataa
DBGET
integrated database retrieval system
