Cololabis saira (Pacific saury): 133431169
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Entry
133431169 CDS
T09849
Symbol
cdh17
Name
(RefSeq) cadherin-17
KO
K06811
cadherin 17, LI cadherin
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csai04515
]
133431169 (cdh17)
Cell adhesion molecules [BR:
csai04515
]
Cadherins
Major cadherins
133431169 (cdh17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_4
Cadherin_CELSR2_9th
T4_gp9_10_C
RET_CLD1
RibLong
CBM_35_2
Motif
Other DBs
NCBI-GeneID:
133431169
NCBI-ProteinID:
XP_061572767
LinkDB
All DBs
Position
3:complement(25498789..25513112)
Genome browser
AA seq
864 aa
AA seq
DB search
MTPMVHLLLLLFLSSIAVGKDLEEKKGPFQDTELDVAEGTPVPYALHQFQMAGARVDGFR
LSGEGKDDIRISKDGWLFLEKPLDWSRDNHYILTVEALADDVVVGNSIVVTINVLDINNN
APIFNQSGYTATVREHNPAGVTFTQVFASDMDDPETPNAQLSYSLVSQIPNNHNILLFQI
DPNTGEISTTEEGEEMLKAKEGIHYGRGEDGSIDALKGKFDEYCSVQKVPYEQNPFFTCV
ERAEQRRRNVDPLENPDYTLIVRVQDQRGTLEKPLSGNTRVSIAVRQNMWMNPGPITVQE
NLKGAYPRVIAKVRSNDPDAIYRLVQKERQLKFPFKITEDGEILLTEELDREEKDMYILV
VFAMDAHDNEVDPPMEIQVLVEDVNDNGPVCEHEESVFELQEEEPVGSEVGHLLAHDNDM
EGTLNSQLTYAIESQSSPTTQAFSIDDTGTIQALRLFRRKEQAVYNLNVRVSDSDFSTVC
KVVIKIIGVNNELPLFEKKDYGSQTLAEDTPVGHTVVTIKATDGDEPGSGVSIIEFHISA
GDDDERFIVETDGNGVGHLVVAKPLDFESSPMHNLKIDARNPEPLRKDLQYGSESTVTVS
VTVTNVDEAPEFSLDMDMAVSVAEDATKGSVLLKVEAQDPEGKEIRFKLDGDAQGWLEID
ASTGEIKTKNILDREKVESFDVTVIAFEKGNPEMSSERVVHVNLIDVNDNVPKLTETQSY
ICMKDMKPVIIKAEDKDGAPFSKPFTFSFANSKKSPNWELHKVDDESAELRLKKKPTQDR
TFPLSINIVDNAGVGITQLFEVRVCNCTELGHCYTAPHGVGFKPEIGATVGILAGVLGFC
LIAFIIVIKRTGKKSKSEEENAMM
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgacacccatggtgcatctgttgttactcctgttcctgagcagcattgctgttgggaag
gatctggaggagaagaagggtccattccaggacactgaactggacgtggcggaggggaca
ccagtaccctatgcactgcatcagtttcagatggcaggtgcgagggttgatggtttcagg
ctgagtggagaaggtaaggatgatatcaggatctcaaaggatggttggcttttcctcgag
aaacctctggattggtcgagagataaccactacattctcacggtggaggccctggcagat
gatgtcgtggttggtaactctatcgttgtgaccataaatgttttggacatcaataacaac
gccccgatcttcaaccagagcggctacacagctacggttcgagaacacaatccagcaggt
gtcacttttactcaagtgttcgcatcggacatggacgacccggagacccccaacgctcaa
ctgagttacagcctggtcagccagatccccaacaatcacaacatcctcctgttccagatc
gatcctaatactggagagatctccaccacagaagaaggagaagagatgctgaaggccaaa
gaagggatacattatggcaggggagaagacgggagcattgatgctctgaaagggaagttt
gacgagtactgttccgtgcagaaagtcccttatgaacaaaaccccttcttcacttgtgtg
gagagagcagaacagaggaggcgtaacgtggacccactggagaaccccgactacacccta
attgtgcgagtgcaggatcagaggggaactttagaaaaaccgctgagtggaaacaccaga
gtaagcatcgcagtgcggcaaaacatgtggatgaaccctgggcccataactgtccaagag
aacttaaagggagcttaccctcgggtcattgctaaggtccggtctaatgaccctgatgcc
atctacagactggtacagaaagaaagacagctgaaattcccctttaagatcacagaagat
ggagaaatattactgacagaagagctcgacagagaggaaaaagacatgtacatcctggtt
gtttttgcaatggatgcacatgacaacgaagtggatccacctatggagattcaggtcttg
gtggaggatgtgaatgataatggaccagtgtgtgaacatgaggagagtgtgtttgagctg
caggaagaggagcctgtaggcagcgaggtaggacacctgttggcccacgacaacgacatg
gaagggacattgaattcccagctgacttacgccatcgagtcccaaagttctcccaccacc
caagccttctccattgatgacaccggaacaattcaggcgctgcggttgtttaggcgaaag
gagcaggcggtctataacctcaacgtcagagtcagtgactcagatttcagcacagtctgc
aaggtggttatcaagatcattggcgtcaacaacgagttgcctctgtttgagaagaaagat
tatggcagccaaaccctggcagaggacactcctgtgggacacactgtggtcaccatcaaa
gcaacagacggtgatgaacccggcagcggcgtttcgattattgagttccacatctctgca
ggcgacgatgacgaacgctttatcgtggaaactgacgggaacggtgttggtcatctggtt
gtagcaaagcctctggactttgagtcctctcccatgcacaacctcaagattgatgctcgc
aacccagagccactgaggaaagatctgcaatacggcagcgagtccactgtcaccgtctct
gtgacagtcaccaatgtggatgaggccccagagtttagcctggacatggacatggctgtg
tctgtagctgaggatgccaccaaggggtcggtgctgctcaaggtggaagcacaggaccca
gaagggaaagagatcagatttaagttggatggtgatgctcaaggctggctggaaatcgat
gcttccactggagagatcaagaccaaaaacatactggacagagagaaagtggagagcttt
gatgtcacagtcatcgcctttgagaaaggaaaccctgagatgtcgtccgaacgcgtggtc
cacgttaacctgatagatgtcaatgacaacgtccccaaactgactgagacgcagtcctac
atctgcatgaaggacatgaagcctgtcatcatcaaggctgaagataaagacggcgctcct
ttctccaaacctttcactttcagcttcgccaacagcaagaaatcacccaactgggagctt
cacaaagtcgatgatgaatcagctgagctgcgcctgaagaaaaagccaactcaggatcga
acgttccctctcagtatcaacattgttgacaatgcaggcgtaggaatcacacagttattt
gaggtgagagtatgcaactgcacagaactgggccactgctacaccgcacctcatggagtt
ggattcaaacctgaaataggagcaaccgtcgggatccttgcaggcgttctgggattttgc
cttatcgccttcatcatagtgattaaacgcacaggtaaaaagagcaagtctgaggaggag
aatgccatgatgtaa
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