Cololabis saira (Pacific saury): 133432368
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Entry
133432368 CDS
T09849
Symbol
snx27b
Name
(RefSeq) sorting nexin-27b isoform X1
KO
K17936
sorting nexin-27
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133432368 (snx27b)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csai04990
]
133432368 (snx27b)
Membrane trafficking [BR:
csai04131
]
Protein recycling
Others
Others
133432368 (snx27b)
Domain-containing proteins not elsewhere classified [BR:
csai04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
133432368 (snx27b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
SNX17-31_F2_FERM
PDZ_2
SNX17_FERM_C
USP7_C2
Motif
Other DBs
NCBI-GeneID:
133432368
NCBI-ProteinID:
XP_061572868
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All DBs
Position
3:26599442..26612447
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AA seq
581 aa
AA seq
DB search
MADVEGPGLCSPSVPPLPAPPPSRDGSSSGGTGTPDDAGGSCCQTASSTTTTTVTSGPRL
VRIVKSDSGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILE
VNGVNVEGATHKQVVDLIRAGERELVLAVLSVPPQEADCLDPGDDGSSQSCYDYSDKQAV
PISIPSYKHTELNNEKFVVYNVYMAGRQLCSKRYREFVILHQNLKREFGSFAFPKMPGKW
PFSLSEQQLDARRRGLEEYLEKVCSVRVIGESDIMQEFLSDSDENYNGVSDVELRIAMPD
KTTLTVRVRKNSTTDQVYQAVVMRLGMDSVTASYFALFEVINHTFVRKLAPNEFPHKLYV
QNYTSAIPGTCLTLRKWLFTTEEEILLNDNQLAVNYFFHQAVDDVKKGFIKADQKSYQLQ
KLAEQKKMSMCLNLLRGCEGYNEIVFPHCSCDSRRKGHVITAISIHHFKLHACTEEGTLE
NQVIAFDWGEMQRWDTDEEGIAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKW
KKEVEEEATDKDNKNCSKDEYFPAAEAQKGWGHIGTEIVTS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgtcgagggaccagggctctgctcgccctccgtccctccgctgcctgctcct
cctccctcccgcgacggctccagcagcggcggcaccggcacgccggacgacgccggcggc
agctgctgccagacggcttcatccaccaccaccaccaccgtcacttcgggcccgcggctg
gtccgcatcgtgaagtccgactcgggctacggcttcaatgtgcggggccaggtgagcgag
ggcgggcagctgcggagcatcaacggggagctgtacgctccgctgcagcacgtcagcgcc
gtgctgccggggggcgccgccgacagggcgggcatctccaagggggaccggatcctggag
gtgaacggggtgaatgtagaaggagccacacacaagcaggtggtggacctgatccgggcc
ggcgagagggagctggtgctggccgtgttgtccgtccccccgcaggaagccgactgcctt
gatcctggtgacgatggatcatcccagtcctgttacgactactcagacaagcaggctgtc
cccatctctattcccagctacaaacacactgagctcaacaatgagaagtttgtggtgtac
aatgtgtacatggcaggcagacaactgtgctccaagcgataccgggagtttgttattcta
caccaaaacctgaagagggaatttggcagttttgcatttcccaagatgcctgggaaatgg
ccattttctctgtcagagcagcagttggacgcacgacgcagaggcttggaggaatacctg
gagaaagtctgctctgtgcgagtaattggagaaagtgacatcatgcaggagttcctgtct
gactcagatgagaactataacggcgtgtcagatgtggagttgagaatagccatgcccgac
aaaactacactcactgtcagagttcgcaaaaactctactacagaccaagtttatcaggct
gtggtgatgaggctcggtatggacagtgtaacagccagctacttcgccctgtttgaggtc
atcaaccacacctttgtgcgtaagctcgccccaaatgagtttccccacaaactctatgta
cagaattatacctcggccatcccgggaacctgcctcaccctgcgcaagtggctcttcacc
acagaagaagagattctgcttaatgacaaccagctcgccgtcaactacttctttcatcag
gctgttgacgatgtgaagaaaggcttcatcaaagctgatcagaagtcctatcaactacaa
aagctggcagagcaaaagaagatgtccatgtgcctgaatttgttgaggggttgtgagggc
tacaatgagatcgtttttcctcactgttcctgcgactcccgacgtaaaggccacgtgatc
acagccatcagtatacaccacttcaagcttcatgcctgcacagaggaaggcacacttgaa
aaccaggtgattgcatttgactggggggagatgcagaggtgggacacagatgaagaggga
atagccttctgttttgaatatgcacggggagagaagaagccacgttgggttaagatattt
acaccttattttaactacatgcacgagtgcttcgagagagtcttctgtgagctgaagtgg
aagaaggaggtagaagaggaggctacagacaaagacaacaagaactgcagtaaagatgaa
tattttccagctgctgaggcacagaagggatgggggcacataggaacggagatcgtcacc
tcctaa
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