Cololabis saira (Pacific saury): 133432619
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Entry
133432619 CDS
T09849
Symbol
itga10
Name
(RefSeq) integrin alpha-10
KO
K06586
integrin alpha 10
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04510
Focal adhesion
csai04512
ECM-receptor interaction
csai04810
Regulation of actin cytoskeleton
csai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133432619 (itga10)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133432619 (itga10)
09142 Cell motility
04820 Cytoskeleton in muscle cells
133432619 (itga10)
04810 Regulation of actin cytoskeleton
133432619 (itga10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csai04515
]
133432619 (itga10)
Cell adhesion molecules [BR:
csai04515
]
Integrins
Integrin alpha subunits
133432619 (itga10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP_3
VWA_2
Integrin_A_Ig_3
FG-GAP_2
vWA_SIBA-E
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
133432619
NCBI-ProteinID:
XP_061572887
LinkDB
All DBs
Position
3:complement(26927861..26964075)
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AA seq
1169 aa
AA seq
DB search
MELHRYLLCLKFILLLKELCQCFNIDVKHPRIFSGPEDALFGFSVLQHEADGEKQLLVGA
PWDGPANNRKGDVYKCIVGDEKHSNCSKVNLGDTALQNVSKNLRNSHLGMTLTPQHPDGF
LACAPLWSQECGTSMFSTGICASVSDDLEPRETIAPTAQRCSTYMDIVIVLDGSNSIYPW
YEVQNFLSNILSKFHISSDQMQVGILQYGEIAVHEWSLKDYQTTQEVVEAAKNISRQEGR
ETRTAHAIFKACTEAFSPDRGAREGATKVMIVVTDGESHDGDELPEALNECISRNITRYA
IAVLGHYIRRQQDPETFIKEIKDIASKPEDKYFFNVTDEAALNDIVDALGDRIFTLEGTL
GYNESSFHMEMSQIGFSTHTLDDGILFGMVGAYDWDGGVLKKGTNFKIMPPREAFESEFP
LELKNHAAYLGYTVSSVVVGDWRTLYVAGAPRFKHKGKVILFELSDAGEVNIVQAMNGEQ
IGSYFGSEVCGMDIDQDGITDVLLVAAPMFLGSGNKEAGKVYIYTFSGEEVFVRNGTLKS
EEKSQDARFGYTLSAAPDLNHDGFTDLVVGAPLEDEHRGAIYIYHGDGIYLIHKCKQRIP
GSSLSPSLQYFGRSVSARLDLDGDGLIDLAVGAQGSAVLLSSRRIVQINVSLSFQPHSIN
VIQKTCQRGGRDSACLNATACFTAVSRSPGPNRNTFDLWVSATLDDRKLSARALFDDSSH
RQIQLPVRVHTGETVCYKLPFHVYDTADYIRPISFSLQFKINNTETGPVLDEGWPTTVKK
SIPFFKDCGEDDVCTTDLVLKAHMDISGTKQKPYVIRSSRRRLAVEVQLHNRLENAYNTS
LTLHYSRNLHFSSLSIREVANFKIECTALASNSHSCNVSYPVFRSQSKVNFMLEFEFSCT
SLNNRVQMKLSASSDSLEREDTLGDNSVQLQTFVLYEPDLFVSSESNLNRYEVHPTRTAS
EAIGPEFHTYLRLQNLACYSVSNLELRLYLPSVAAGDTVFMTITDVLSHNATEVNCSVLS
DVAQLKARQREVRPFHPEDMMHDEILNCSRSWCTEVACDVRQLRQSAIIRVSRRVHDDFF
RKAKYKSVRIIGSYSLTAQETNPFTLGKGTIWGETALEVLKGRAIPISLWILIGSTIGGL
LLLALIIFILWKLGFFTRKNIREDENHED
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atggagctacatagatacctgctgtgcctgaagttcatccttcttcttaaagagttgtgt
cagtgtttcaatatagatgtgaagcatccacggatcttcagcggcccagaggatgctcta
tttggtttctctgtcttacaacatgaagctgatggagagaaacagctgctggttggcgct
ccctgggatgggccagccaataacagaaaaggagatgtgtacaaatgcattgtgggagat
gagaaacactcaaactgcagcaaagtgaatctgggcgataccgctctccagaatgtttct
aaaaatctgaggaattcgcacttgggaatgaccctcacaccacagcaccctgatggcttc
ctggcatgtgcccctctttggtcacaggagtgtggaacgtccatgttcagcactggcatc
tgtgcctctgtcagtgacgacctcgagccaagagaaaccatcgccccaactgcacaaagg
tgctccacatacatggacatcgtgatcgtgctggacggctccaacagcatctacccctgg
tatgaggtccagaactttctaagcaacatcctcagcaagttccacatcagctcggaccag
atgcaggttggtatactgcagtatggagaaatagcagtccacgagtggtctctgaaagac
taccagaccacacaggaagtggtggaggccgccaagaacatcagccgacaggagggacga
gagacgcgtactgcacatgccatctttaaggcctgcacggaggctttcagccctgatcgt
ggagcgagggagggcgccaccaaggtgatgattgtagtgacagatggcgagtcgcacgat
ggggacgagctaccagaggctctgaacgaatgtattagcagaaacatcaccagatacgcc
attgctgttctgggtcattacatccggagacaacaggatccagagactttcattaaggag
atcaaggacatcgccagtaaacccgaagacaaatattttttcaatgtgactgatgaagct
gcacttaatgacattgtggatgccctgggagacaggatcttcactctggaaggtacgctg
ggctacaacgagagttcattccacatggagatgtctcagattggcttctccacacacaca
ctggatgatggcattctgtttgggatggtgggcgcctacgactgggatggtggagtgttg
aagaaagggactaacttcaaaatcatgcccccaagagaggcctttgagagcgagtttcct
ctggagctcaagaatcatgctgcttatttaggatacacagtgtcatctgtagtggtcggt
gactggaggacactgtatgtagctggagcgcctcgatttaaacataaaggcaaagttatt
ctgtttgaactcagcgatgctggtgaagtcaatattgtgcaggccatgaatggagagcag
ataggatcttactttggtagtgaagtatgcgggatggatatcgatcaggacggcatcact
gatgtccttctggttgctgctcccatgttcctcggctcaggaaacaaagaggctggtaaa
gtctacatctacaccttcagtggggaggaagtgtttgtacgtaatggtactctgaagtct
gaggaaaagtcccaggatgccaggttcggttacacactgtcagccgctcctgatttgaac
catgacggcttcactgatctggtggttggagctccgctggaggatgaacaccggggagcc
atctatatctaccatggagatggcatttatctcatccacaaatgtaaacagcgaatacca
gggtcatcactttccccctccctgcagtattttggccgcagcgtgagcgcccggttggac
ttggatggagacggcctgatagatttggcagtgggagcacaaggcagtgcggtgctgctc
agctctcggagaatcgtccagatcaatgtcagtctgtccttccagccacactccatcaac
gtcatccagaagacgtgtcagaggggaggcagagactctgcctgtctgaacgccacggcc
tgcttcacggctgtctcccgctcccctggaccaaacaggaacacttttgatttgtgggtg
tcggcgaccttggatgacaggaagttgtcggctcgggctctgtttgacgacagctcccac
aggcagatacagctgccagtgcgagtgcacactggagaaactgtctgctacaaactcccc
ttccatgtttacgacacggcagattacattcgtccaatcagcttctcactgcagtttaag
atcaacaacacagagacgggaccggtgctggatgaaggctggcccaccaccgtcaagaaa
tctatcccattctttaaagactgcggcgaggatgacgtttgcacaacagacttggtgctg
aaggcacacatggacatctctggaactaaacagaagccgtatgtgattcgcagctctcgt
aggcgtctggcagttgaagtgcagctccataacagactggaaaacgcctacaacaccagc
ctgacgctgcactattcacgaaacctccacttctccagcctgagcatcagagaggttgcc
aactttaagatcgagtgtacagcacttgcctcaaacagccactcgtgtaacgtcagctat
cctgtgtttcgctctcagtcaaaggttaacttcatgctggagtttgagttcagctgcaca
tctttgaacaatcgagtacaaatgaagctcagtgcttccagtgacagtctggagcgagag
gataccttgggagacaacagtgttcagctgcagacttttgttctgtatgagccagatctg
tttgtcagtagcgagtcaaacctgaaccgctatgaggtccaccccacacggacggcttca
gaagcaattggaccagaattccacacatacctcaggctgcagaatctagcctgttactct
gtgagtaatctggagctgcggctgtatctgccctctgtggctgcaggggacactgtcttc
atgaccatcacagatgtcctctcacacaacgctacagaagtgaactgcagcgtgttgagt
gatgtagcgcagctgaaggccaggcagcgagaagtgcgtccctttcatcctgaggacatg
atgcatgatgaaatattgaactgcagcaggtcatggtgtacggaggtcgcgtgtgacgtc
cggcagctcagacagagtgccatcatccgagtcagccgcagagttcatgatgattttttc
agaaaagccaaatataaatcagtaaggataataggttcctacagcctcacagctcaggag
actaatcccttcactctgggtaaagggacaatctggggggagactgcactggaggtgctg
aagggtcgagctattcccatctcactctggattctcatcggtagcaccatcggaggtttg
ctactactggccctcattattttcatactgtggaagcttggatttttcacacgcaaaaac
ataagagaggatgaaaatcatgaagactga
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integrated database retrieval system