Cololabis saira (Pacific saury): 133433376
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Entry
133433376 CDS
T09849
Symbol
tmc4
Name
(RefSeq) transmembrane channel-like protein 7 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
133433376 (tmc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csai02000
]
133433376 (tmc4)
03037 Cilium and associated proteins [BR:
csai03037
]
133433376 (tmc4)
Transporters [BR:
csai02000
]
Other transporters
Pores ion channels [TC:
1
]
133433376 (tmc4)
Cilium and associated proteins [BR:
csai03037
]
Other cilia and associated proteins
Stereociliary proteins
133433376 (tmc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
133433376
NCBI-ProteinID:
XP_061572952
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All DBs
Position
3:complement(27660672..27673268)
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AA seq
692 aa
AA seq
DB search
MDGYLQRQSSTVQPFSGNGYLGDQQSLRLRRVSSQVSNQNYPQHDWSSEPAGEDEVDNAG
ITPEIRSFPYTMALKRAVRQVQERQVPVLSGSKSWKRVKSLRKLKKTTREFLSFFILWGK
SLQKIGGNFGGGVLSYFVFLRFLVVLNIGSFLLIAGFVIIPSIVFKHVGNSSEISTGVEE
CMKYDPAPQALVVFYQFFLDLLSGTGFMEYSFMFYGFYNNTMVADDNFSYNIPLAYLFTA
IFYFAFCLICMIVRMGSAARVAVATGGSTVVNYSMIVFTGWDYGCLGDKATKLKQKNIHY
QLQVDLEEERLKKQAASRTLGQKVLLYSLRVLMFFVALGLSAAAFLSIFAATVSSQDKSD
VQGILGLLYEYLPSIAITAGNFLVPLLCDQIALIERYSPSITVVVALLRAVVLRLVSLGV
LLFTLWSQITCYGNKDDSLCETCKYHHEDYPCWETRVGQEMYKLTLFDFLINIAMLLLVE
FPRRMVVDNWSCKLSQWLGRQEFVIPSNVLGLVYGQTVVWTGALFCPVLPLINTVKFFIL
FYCKKITLFYNCRPALKTFRSTTSTFFFLVVLLIGWSLALVVMIYSIAVIHPSWGCGPFR
SHQNMWLIVPKSLYNLPEVTQEFLFFIGSQAFSIPLFALSFVVMWYFIALASVYGKSVAL
LRAQLKLEGRDKQFLVKQIEELSRHLPIPEED
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggacggttacctacagagacaaagctcaactgttcaaccattctcaggaaatggttac
cttggtgaccagcagtcactcaggttacgtcgggtttcatcccaagtgtccaatcagaat
tatcctcagcatgactggagctcggagcctgcaggtgaggatgaagtggacaatgctggg
attaccccggagatcaggagtttcccgtacaccatggcactgaaaagagctgtgcgacag
gtgcaggaaaggcaggtgcctgttctctccggatccaagtcttggaaaagggtcaaatcc
cttcgtaaactcaaaaaaaccaccagagaatttctttctttttttattctatggggcaag
tccttgcagaagattggagggaactttggaggtggtgtcctgtcttacttcgtgtttctc
cgattcctggtggttctcaatattgggtccttcttgctgattgctggatttgtcatcatc
cccagcatcgtcttcaaacatgttggaaatagttctgagatcagcacaggtgtagaggaa
tgcatgaaatatgaccctgcccctcaagccttggtggtcttttatcagttcttccttgac
ttactttcaggaacgggttttatggagtattcattcatgttttacggcttctacaataac
acaatggtggcggacgacaacttctcctacaacatcccccttgcctacctttttactgcc
atcttctactttgccttttgtctcatttgcatgatagtgcgcatggggagtgcagctcga
gttgctgtggcaacgggaggcagcactgtggtcaactacagcatgatcgtgttcactgga
tgggactatggttgcctgggtgacaaagctaccaagctgaaacagaaaaatatccactat
cagctacaggtggatctggaggaggaacgcttaaagaaacaggcagcctctcggacattg
ggtcaaaaagtacttttatactccttacgtgtgctcatgttttttgttgcacttgggtta
tctgcagcagccttcttgagcatctttgcggccactgtctccagccaggacaagagtgat
gtgcaagggatcctcggtttgttgtatgaatatctgccatccatcgccatcaccgcagga
aacttcttggtgcctctgctttgtgaccaaatcgccctaatagagcgatattcccccagc
attactgttgtagtagcattgttaagggcagtggtcctgcgcctggtgagtttgggtgtc
ctcctcttcaccctgtggagtcagatcacctgctatggcaacaaagatgatagtttgtgt
gaaacgtgcaaatatcaccatgaagactacccgtgctgggaaacccgtgtgggacaggag
atgtacaagctcactctgtttgatttcctcatcaacattgctatgcttctactggtcgaa
tttccacgcaggatggtggtggacaactggtcctgtaagctatcacagtggctgggccgg
caggagtttgtgattccctccaacgtacttggactggtttatggtcagaccgttgtctgg
actggagcccttttttgccctgtgctgccacttattaacaccgtcaagtttttcatcctc
ttctactgcaagaagatcacgctcttctacaactgccggccggccctgaagacgtttcgc
tccaccacctccaccttctttttcctggtcgtactcctgattggctggagtttggccttg
gttgtcatgatttacagtattgccgtgatccatccctcatggggttgtggacctttccgt
tcccaccaaaacatgtggctgattgttccaaagtctttgtacaatctcccagaagtgaca
caggagtttctgttcttcattggctcacaggcattctccatccctctgtttgcattatca
ttcgtggtgatgtggtacttcattgctttagcctccgtttatgggaaaagtgttgcattg
ctaagagctcagcttaaattggagggccgagacaagcagtttttggtcaagcagattgag
gagctgagtcggcaccttccgataccagaagaggactga
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