Cololabis saira (Pacific saury): 133433859
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Entry
133433859 CDS
T09849
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04020
Calcium signaling pathway
csai04080
Neuroactive ligand-receptor interaction
csai04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
133433859
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
133433859
04082 Neuroactive ligand signaling
133433859
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csai04040
]
133433859
Ion channels [BR:
csai04040
]
Ligand-gated channels
Glutamate (ionotropic)
133433859
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
133433859
NCBI-ProteinID:
XP_061572994
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All DBs
Position
3:27986527..28048369
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AA seq
1965 aa
AA seq
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MVAIPTLSLLLVLAEWAGLVYASPHLLLRPSPRERDAGTVMNFNIAVIHAGATVQAEAAV
AGPGGRVLYPGFGRVYGSLGESVVTQWGSANVIWLQVNDSSPKTVLSQLCELLAARPLQG
LVYEEERPPRTPWGPLAPMLEFVSAQTGLPIVAVGGGAGLGRMPQESGSIFLQFSSSTAL
QLEVIFEVLEEYDWTAFSVVSTRHHGYQEFLSVVEGLTDGSFIGWEKRSVVILNVTDDPG
EARTRRLLKENEAQVRLLYCSQEEAELVFRAAWAAGQAGASHMWFAVGPALSGLSMENLP
RALFAVRPQGWRDEPRRRIARGVSVLTHGAVAMRKEYGTTGGPNFVTNCMTDANQTQRLR
GRMRYFSNITLGGRDYSFNSDGYLANPFLDVISWTPGRGWEDVGWWENGVLRLRYPAWSR
YGPFLKPPDDAQHLRVVTLEERPFVIVELADPASGTCIRDSVPCRRPLNASALHEGVAPM
KQCCKGFCIDILKRLAKIVGFTYDLYLVTNGKHGKKIDGVWNGMIGEVVYKRADMAIGSL
TINEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVT
VFIFEFFSPVGYNRSLQTGKKPGGSTFTIGKSVWLLWAIVFNNSVPVENPRGTTSKIMVL
IWAFFAVIFLASYTANLAAFMIQEEYIDTVSGLSDKKFQHPEEEYPPLKFGTVPNGSTEK
NIRSNYPGMHQYMGKYNQKGVEDAILNLKTGKLDAFIYDAAVLNYMARKDEGCKVMTIGS
GKVFATTGYGIALHKNSRWKRPLDLALLQLVGDDEIEMLERLWLSGICHNDKIEVMSSKL
DIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWKLRHCIATSSGKLDFLLAISRGMYSCCSF
EDETAPGGAKLPSHHTAMVTVPSQPHVVSTTMSNPVIAMAQQQQQPQQQQPQPVYKTPLP
GSPPTVVHSGTAMGSSNTPIAGAPLPCSTFLPRPDRRLAVVDRWRLPKSATATNPMAVRA
GITDMGPFTQKIPPTWASTAGGGGGLDGYKRYYGPIDPEGLGPCMEQQAGSQTPKTMPRG
HPQPPPASVAFYSEKGMDHGVGKRVVGGGSGGQGKGAVKSLGTPRLPPKSQAPLPPTPPL
PHPSPPLPSSFWRKRRPKKPKEPGGPLYENILPLGRRGGARDGVREGVARRARPLSPPLS
LPIPVPLSPSYTPPSPSASLHYTSSSSSSTTSSTSTSSSASSSRSTSPTYSYSSSRSTQD
RTGGIDGEDDDDEELTEESSLLLGRGRERERSIIRPRSLSHGRLPPPIPPRKPRTSWGDR
ERERERERGGSQLSQLQEWWASWNERDRSGIFGDTERQKRDKKRRKDKEKEKKKKKKNKK
RKKREERERERERERKRRKMKKKKKKALKTKKRKKLTGGKRSEPEEGDVEPEREGEAEGD
REGGIQDYSSFSGQYRSVFGEKGRDSWEGERERGRREGGEEGNDREEEDSGRSRERRPKS
SHSRSRHRIPSKRYPNLNKLPSSVKFWVNGRGDDSSAPPSSFHPLLPSTKRRRSGVMDRD
DSGRVGERRPLLMHYEKEKAHTREGLSFHEWDSDDDDDDDDDDDDDDDDDDDEEETRDRV
RERVDERGRRTGRGAVSESERDRARAEDSYSDEGSSGEFGQFERYWEEGARGSSAEIGGI
GGGGWFFGTYPSREKGGSVNSRDDSLLGTRAEGWIGADFWGSGPGAGWGSGGGSGGLGSH
WPPPPTAFPPPRRYWSMDKIPVKGEKKWKSGGGKNKGRSRERGEETGRATMCSCSLYPQP
HPYPHRHGRSHTSHSKRGSTTLSHSQEELLPHCHSFSGGTRPKPLPPKPDSSQAKSGSQS
NLSLSTQPTDHPQQPSPSPPQQPSMSPTSLPMPIPPPPSSSSVSPPAGVGMAGQAQASAS
AKLQYQRLRSVPQPRRFYSPHLPLKAKSLCSRRGSAHFSSLESEV
NT seq
5898 nt
NT seq
+upstream
nt +downstream
nt
atggttgccatacctactctctctctcctgttggtcctggcagagtgggcaggtctggtg
tacgcatccccgcacctcctgcttcggccgagcccacgggagcgtgatgctgggactgtg
atgaacttcaacatcgctgtcatccatgccggtgctacggtgcaggcagaggcagcagtg
gcagggcctggaggaagggtgctttaccctggtttcggccgggtatacggctccctgggg
gagagtgtggtcacccagtggggctctgctaacgtcatttggctacaggtgaacgacagt
agtccaaagacagtgctgtcccagctgtgtgagctgctggctgctcggcccctgcagggc
ctggtttatgaagaggagaggccccctcgcacaccttggggtcctttggcccccatgctg
gagtttgtctctgcgcaaacaggactgcccatagtggctgtaggagggggagcagggctg
gggaggatgccacaggaatcaggttccatctttctccagttcagctcctctactgcactg
caattagaggtcatctttgaggtactggaggagtacgattggactgccttctccgtcgtg
tctacgcgtcaccatggctaccaggagttcttgtctgtggtggagggcttgaccgacggc
tcgttcattggctgggagaagaggagcgtggtgatcctgaacgtgaccgacgaccctggg
gaggcacgcacgcgcaggctgctgaaggagaacgaggcgcaggtgcgtttgctgtactgc
tcccaggaggaagccgagctggttttcagagctgcttgggcagccggtcaggctggagca
tcgcacatgtggtttgcagtggggccagcactctcaggtttgagcatggaaaacctgccc
cgggctttgttcgccgtacggccccagggctggagggacgaacctcgccgaaggatcgct
cgaggtgtgtctgtgctgactcacggggcagtggcaatgcgcaaggaatacggaactacg
ggtgggccaaacttcgtcaccaactgcatgacggatgccaatcagacccagagactgcga
ggcaggatgaggtattttagcaacatcacactcggtggacgagattactccttcaatagt
gacggttacttggccaaccccttcttggatgtcatctcctggacacctggacgtggatgg
gaagatgtaggctggtgggagaatggggtactaaggcttcggtatccagcctggtcccgc
tatgggcccttccttaaaccacctgatgatgcccagcacctgcgtgtggtcacgctggag
gagaggccatttgtcattgtggagctggcagatcctgcatctggaacctgcatccgtgac
tcagtcccttgcagacgacctcttaatgccagtgccctccacgagggagtggctcccatg
aagcagtgctgcaagggattctgcattgatatcctcaagcgactggcaaagattgtcggc
ttcacctacgatctgtacttggtgaccaatgggaagcacgggaagaaaatcgatggagtt
tggaacggcatgattggagaggtggtgtacaagcgggcggacatggccattggttcgctg
actatcaatgaggagaggtcagaggttgtggatttctctgttccctttgtggagacaggg
atcagtgtcatggtttcccgtagcaacggaactgtatcaccatcagcttttttagaaccc
tacagtccagccgtgtgggtgatgatgtttgtcatgtgcctcactgttgtggctgtgact
gtcttcatttttgaattcttcagccccgtgggttacaaccgcagcctccagactgggaag
aagcctggagggtcaactttcactataggaaagtctgtctggcttctgtgggccattgtc
ttcaacaactctgtgccagtggagaacccaagaggaaccacaagcaaaatcatggtgctg
atctgggccttctttgctgtcatttttctggcctcctacactgctaacctggctgctttc
atgatccaggaggagtacattgacacagtgtcaggcctctcagacaagaagtttcagcat
ccagaagaggagtacccacctctgaagtttggcacggtgcccaacgggagcacagaaaaa
aacatccgctctaactacccaggcatgcaccagtacatgggcaaatacaaccagaaaggg
gtggaggatgccattctgaacctcaagactgggaaactggacgcttttatttacgatgct
gcggtattgaactatatggctaggaaggacgaaggttgtaaggtgatgaccataggctcg
gggaaggtttttgccaccacaggctacggtatcgccctgcacaaaaactcacgctggaaa
cgtcctcttgacctagccctactgcagctggtgggagatgatgagattgagatgctggag
cggctctggctgtctggtatctgccataatgacaaaattgaggtgatgagcagtaaactg
gacattgacaacatggccggggtcttctacatgctgctggtggctatgggactcagtctg
ctggtatttgcttgggaacatttggtgtactggaagcttcgccactgtatagctactagt
tctggcaaattggactttctcttggcgatcagcaggggtatgtacagctgctgcagcttt
gaggatgaaacagcaccaggtggcgctaaattgccttcacaccacactgcaatggttaca
gttccatcgcagccacatgtcgtttcaacgaccatgagcaacccagtcattgccatggcg
caacagcagcaacaaccacaacagcagcaaccgcagcccgtctacaaaacacctctacca
ggttctcctcccaccgtggtgcattctgggacagcaatgggttcctcaaacacccccatt
gctggtgcacccctcccttgctccaccttcctgcccaggccagaccgcagactggctgtg
gtggatcgttggaggctgcccaaatctgcaacagccaccaatcccatggctgttagggcg
ggcatcactgacatgggaccctttactcagaaaatcccaccaacctgggcttcaactgct
ggagggggcgggggactcgatggctataagagatactatggtcccattgaccctgaggga
ctggggccctgcatggagcagcaggcagggtcccagacccccaagactatgcccaggggc
cacccccagccccctccagccagtgtggccttctattcagagaagggcatggaccatggg
gtagggaagagggtggtgggaggtggcagtggaggtcaggggaaaggggctgttaaatct
ctgggtactcccagactgcctcctaagagtcaggcccccctgcctcctacacccccactg
ccacatccctctccccctctcccttcatctttctggagaaagcgcaggcctaagaagccc
aaagagcctggaggaccactgtatgagaacattctgcctcttgggcggaggggaggagca
cgcgatggtgtgagggagggggtagcgagacgggcacgccccctttctccccctctctca
cttcctataccagtgcccctcagcccctcttatacccctccttctccctctgcatccttg
cattatacttcctcgtcctcttcgtcaaccacttcgtccacatctacatcctcatctgct
tcatcttctcgctccacatctcccacctactcttacagctcctccaggagcacacaagac
agaactggaggaatagatggagaagatgacgatgatgaagagctgacagaagagtcgagc
cttctccttgggaggggaagagagagggaacgttcaatcatccgccctcgttccctcagc
cacggccgcctgccaccacctataccccccaggaaaccacgcacatcctggggtgacaga
gagcgggaacgagagagggaaagaggggggagccagctgtctcagctccaagagtggtgg
gcaagctggaatgaaagagacagaagtggaatatttggagataccgagagacaaaaaagg
gacaaaaagaggagaaaagacaaagagaaggagaagaagaagaagaaaaagaacaaaaag
aggaaaaagagggaggaaagggaaagagaacgggagagagaaagaaagcgaagaaagatg
aaaaaaaagaaaaagaaggcactgaagacaaagaaaaggaagaaattaactgggggaaaa
cggtctgagccagaggagggagatgtagaaccagagagggaaggagaagcagagggagac
agggagggaggaatacaggactactcttctttttctggccaatataggagtgtatttggt
gagaaaggaagagattcgtgggaaggagagagggagagaggcaggagagaaggaggagaa
gagggtaatgacagggaagaggaagacagtggaaggagcagggagagacgtcccaaatct
tcacactctcgttccagacatcgaatcccaagtaagcggtacccaaacttgaataagctt
ccttcatcagttaaattttgggtgaacggaagaggcgatgactccagtgctcctccctca
tccttccacccgctccttccatctaccaagcgacgaagaagtggagttatggatagagat
gacagtggcagagttggagagaggcgtcctttgttaatgcattacgaaaaagagaaagca
cacacacgagaagggctgtcctttcatgaatgggattctgacgacgacgatgacgacgac
gacgacgacgacgatgatgatgatgatgatgatgacgaagaggagacaagggatagagtg
agggagcgggtggacgaaagggggaggaggaccggaaggggggcagtatctgagtcagag
agggacagggctagggcagaggacagttactcagacgagggttcatcaggggagtttggt
cagtttgagagatactgggaggaaggtgccagaggtagcagtgctgaaatagggggcata
ggtggaggaggttggttctttggtacctacccttctagagagaaagggggcagtgtcaat
agccgagatgattccttgttaggaactcgggcagagggctggattggtgctgatttttgg
ggatcgggtccaggtgctggctggggatctgggggagggagtggagggctgggctcacac
tggccaccacccccaactgcattccctccacctagacgatactggtctatggacaagatt
cctgtgaagggagagaaaaagtggaagagcggaggagggaagaacaagggccgaagtagg
gaaagaggggaagagacaggaagggcaacaatgtgttcctgcagcctttacccccaacca
catccttatccacaccgccatggccgctcacacacttctcattctaagagaggatccaca
acgctttcccatagccaagaagagcttctccctcactgccacagcttcagcgggggcact
cgtcccaagcctctgcctcccaaacctgactccagtcaggccaaatcaggcagccagtct
aacctcagcctcagcacacagcctacagaccatccacagcagccctcaccgtcaccacca
caacaaccgtccatgtctcccacttccctcccaatgcccatccctcctccgccctcatca
tcctccgtttcaccaccagcaggggtagggatggcaggtcaggctcaggcttcagccagt
gccaaacttcagtatcaaagactgcgctctgtgccacagccacggaggttttactctcct
cacttgccactcaaagccaaaagcctgtgctcacgtcgagggtctgcacacttctccagc
ctagaaagtgaggtatga
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