Cololabis saira (Pacific saury): 133434609
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Entry
133434609 CDS
T09849
Symbol
emg1
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
133434609 (emg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csai03009
]
133434609 (emg1)
Enzymes [BR:
csai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
133434609 (emg1)
Ribosome biogenesis [BR:
csai03009
]
Eukaryotic type
90S particles
Other 90S particles
133434609 (emg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
133434609
NCBI-ProteinID:
XP_061573054
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All DBs
Position
3:complement(28641495..28643549)
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AA seq
237 aa
AA seq
DB search
MAAPGVKKRGLEHLDEYEPKPAKHLRSLHDRMAERRLVVILEGASLETVKVGKTFELLNC
DQHKNMIIKSGRDPGRIRPDITHQCLLMLMDSPLNRAGLLQVYIHTEKNALIEINPQTRI
PRTFPRFCGLMVQLLHKLSVRAADGPQKLLRMIKNPVSDHLPPGCPRIGTSFSAGEAICP
RTIVPDGPAAVVIGAFAHGAVNVDYTEKLVSISNYPLSAALACAKFCSAFEEVWGIL
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcccggtgtgaagaagcgtggtcttgaacatttggacgaatatgaaccaaaa
ccagccaagcacctccgaagcctccacgaccggatggcggagaggagactcgtcgttatc
ctggagggagcatcgctagaaacagtgaaggttggaaaaacgtttgagcttttaaactgc
gaccaacataaaaatatgatcatcaaaagtgggagggaccctgggcgaataagaccagat
atcacccatcagtgtttgctaatgctgatggacagtccactgaacagggcaggcctgctg
caggtttacatccacacagagaaaaatgcattaatagagatcaatccacaaacccgcatc
ccaagaacatttcctcgcttctgtggccttatggttcagctgctgcacaagctaagtgtc
agggctgcagatggtcctcaaaaactactaaggatgattaaaaacccggtgtctgaccac
ctgccccctggctgtcctcgcatagggacttccttctctgcaggcgaagccatttgcccc
cgaactatagttccagacggacctgctgcagtggttattggagcatttgcacatggagcg
gtgaatgtggactacacagagaagcttgtgtccataagtaattaccccctctctgcagcg
cttgcctgtgccaagttctgctctgcctttgaggaagtgtggggtatcctgtga
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