Cololabis saira (Pacific saury): 133434625
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Entry
133434625 CDS
T09849
Symbol
nop2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csai03009
]
133434625 (nop2)
Enzymes [BR:
csai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
133434625 (nop2)
Ribosome biogenesis [BR:
csai03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
133434625 (nop2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
TRM5-TYW2_MTfase
FtsJ
PCMT
Motif
Other DBs
NCBI-GeneID:
133434625
NCBI-ProteinID:
XP_061573055
LinkDB
All DBs
Position
3:28644871..28651147
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AA seq
760 aa
AA seq
DB search
MGRKLDPTNKVKRGPGKKTKKQQGAEVELAKFLPDEETGSKRLSSRGRKRAAKRVQNLKK
PKDVSKEQPNKGFTDENSKWLKPSKRKRKADEPESESDSEEHWEDEDDEEEEQEMPQKKG
GKDEGKNGAKLAVKKQKKNEVEDNDEEEEDDDDDEDDDEDEMVDDYGTLDDGSDGEDLLP
IERAAKKAKKLKESKVLGSDGDDDDDDDDEGEEDDDEKEQKSDDDMEEDDTLQTNTDDGD
TFRLPGAEESEKEGVMSFDLKAIHQRIKDNIDVLCNFSTKREEGKDRQEYISLLKKDLCT
YYSYNNFLIEKLMDLFPLSELVDFLEANEIHRPVTIRTNTLKTRRRDLAQALINRGVNLD
PLGKWSKVGLVIYDSSVPIGATPEYLAGHYMLQGASSFLPVMALSPQEGELVLDMSSAPG
GKTTYVAQLMRNTGVIVANDANADRLKSVVGNIHRLGVTNTVVSNYDGRQFPKVMGGFDR
VLLDAPCSGTGVIAKDPAVKTSKDEADILRSAHLQKEMILAAIDSVNAESSSGGYLIYCT
CSIMWEENEWVVDYALKKRNVKLVPTGLDFGKEGFTRFKQHRFHPSLRLTRRFYPHSHNM
DGFFVAKFKKFSNVIPAAPTGKGETTDASEAPAAADSPKDKPSKSNKANKTAMEKMVPLK
QKDKANGMPAKKTANMKSKAKNYLQTGPKKAKIAKMDGETSKGPEKPVPTTDEKKASKAD
KKEGSRFEKKLAKKPMKAKNRLGKNKFNKLKLMLKKQDKK
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggaaattggatcccacaaataaggtgaagagggggccgggtaagaaaaccaaa
aagcagcagggcgcagaggttgagttggccaaattcttgcccgatgaggaaacaggttca
aagcgtctatcaagcagaggcaggaaaagagctgcaaagagagttcagaatctgaaaaag
cctaaagatgtttctaaggaacagcccaataaaggttttactgatgaaaacagcaaatgg
ttgaaaccatcaaagagaaagcgtaaagctgatgaaccagagagtgagagtgacagcgag
gagcactgggaagacgaagatgatgaggaagaggagcaggagatgccacagaagaagggg
ggaaaagatgaagggaaaaatggtgcaaaattagcagtgaaaaaacagaaaaagaatgag
gttgaagataacgatgaggaagaggaagacgatgatgatgatgaagatgacgacgaggat
gaaatggttgatgactatggtacactcgatgatggcagtgatggagaggatcttcttccc
attgaacgtgctgccaagaaggcgaaaaaactcaaagaatccaaggttcttgggagtgat
ggcgatgatgatgacgacgatgatgatgagggggaggaagatgatgatgaaaaggaacag
aaatcagatgatgacatggaagaggatgacacgttacaaaccaacacagatgatggagat
acattcaggctgcctggtgcagaagagagtgagaaggagggtgtcatgtcttttgacctg
aaggcaatccaccaaagaataaaggacaacattgatgtcctctgtaatttctcaacaaaa
agagaggaggggaaagacagacaggagtacatctcactgctgaagaaagatctctgtact
tattacagctacaataacttcctcattgagaaactaatggacctctttcctctttcagag
ctggttgatttccttgaagccaatgaaattcacagacctgtcacgattcggacgaacaca
ctaaaaacaaggaggcgggacctcgctcaggctctgatcaacagaggagtgaacctggat
ccactggggaaatggtctaaagttggtttggttatctacgattcctctgtaccaataggt
gcaacgccggagtatcttgctggtcattacatgctgcagggagcctccagcttcctgcca
gtcatggccctctctccacaggagggagagttagtgttggatatgagctctgctccaggc
ggcaagaccacgtatgtcgctcagttgatgagaaacacaggagtgattgttgctaatgat
gccaacgctgacagattgaagagcgtggtgggaaacattcaccgtctgggggtcaccaac
actgtggtcagcaactacgacggcaggcagttccccaaggttatgggagggtttgataga
gttctgcttgatgcaccgtgttcaggcacaggagtcatcgctaaagatccagctgtgaag
accagcaaggatgaggcagatatccttcgctctgctcacctacagaaagagatgattttg
gctgccattgactccgtcaatgcagagtcctcttctggaggatacctgatctactgcaca
tgctcaataatgtgggaggagaatgagtgggtggtggactatgctttgaagaaaaggaat
gtcaagttggttcctaccggacttgactttggcaaggaaggcttcaccagattcaaacag
catagattccatccttctctacgactcacgcggcgattttatcctcactcccacaatatg
gatggattttttgtggccaagtttaaaaagttctccaatgtaattccagctgcacccaca
ggaaaaggcgagacaacagatgcttctgaggctccagcagctgcagactcgcccaaagac
aagccatccaaaagcaacaaggcaaacaagaccgcgatggagaagatggtgccattaaaa
caaaaggacaaagcaaatggaatgccagccaaaaaaactgcaaacatgaaatcaaaggca
aaaaattacttgcaaactggtccaaagaaggcaaaaattgccaaaatggatggagagact
tcgaaggggccagagaagccagtaccgaccaccgacgagaagaaagcatcaaaggctgac
aaaaaggagggaagcagatttgagaaaaagctggccaaaaaacccatgaaggccaagaat
agactaggaaagaacaaattcaacaagttgaagcttatgctgaaaaaacaagataaaaag
tga
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