Cololabis saira (Pacific saury): 133438997
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Entry
133438997 CDS
T09849
Symbol
ntrk1
Name
(RefSeq) high affinity nerve growth factor receptor
KO
K03176
neurotrophic tyrosine kinase receptor type 1 [EC:
2.7.10.1
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04010
MAPK signaling pathway
csai04020
Calcium signaling pathway
csai04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133438997 (ntrk1)
04020 Calcium signaling pathway
133438997 (ntrk1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
133438997 (ntrk1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
csai01001
]
133438997 (ntrk1)
Enzymes [BR:
csai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
133438997 (ntrk1)
Protein kinases [BR:
csai01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
133438997 (ntrk1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
LRRCT_2
Ig_3
LRR_8
Ig_2
ig
C2-set_2
LRR_5
TrkA_TMD
C2-set_3
Haspin_kinase
LRR_4
CFC
Motif
Other DBs
NCBI-GeneID:
133438997
NCBI-ProteinID:
XP_061573421
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All DBs
Position
3:37840662..37898817
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AA seq
802 aa
AA seq
DB search
MDVAPRALPLLLPLALTVLSLSPTPTLGGCPLSCRCSFAMLQCLMPNGITSIPALAPQES
ENVTEIYIENQAGLENITETELANYRELKNLTVTSCRLRFISPGAFQNNVKLQYVNLASN
SLEHISWRVFHLLPLLNLVLKDNALVCSCDLFWLQQWQSDDRGDLDSQALSCWSDDEEIP
LNSLVLENCSLPEVTIDFPQIKTEQGGNLTFECHVTGSPAPSVRWRTERLASDFVTERGL
SDSKMTLVLYLTNVSSKDNLHNLTCEAENQAGPREAMVQLDIEFPGRIVFLSDAVPQHNW
CFPFAVDGNPEPSVTWLYNGATFKETPLQYMQFIPDLGDGSVKHGCLFLNKPTHINNGNY
TLLVENRLGRDEATAVGMFMDNPFPSGESPEGMIPVDKGSSPTNKPDMDVTETPESPVFV
VSVAVGLALFACTFLLVTVLIVNKCGQQSKFGIHRSSVLGTEDDLAVSLRFMNFGGSPPS
SDEDSGLSSFVENPQYFCGIIKDKDMCVQHIKRQDIVLKWELGEGAFGKVYLAECANLSP
DSDKMLVAIKTLKDANESTRQDFQREAELLTMLQHQHIVRFYGVCTDGEPLAMVFEYMRH
GDLNRFLRAHGPDAHILEETKIPPLGQLTLPQMLQIAAQIASGMVYLASLHFVHRDLATR
NCLVGEGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIMYRKFTTESDIWSFG
VVLWEIFTYGKQPWYQLSNSEAIECITQGRELERPRTCPKEVHQLMQGCWQREPQQRTVI
KDIHNRLLALVKNPPVYLDILG
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggcgccccgggccctgccgctgctgttgcccctggcgctcaccgtcctgagt
ctgtcgcctacaccaactttgggaggatgcccgttgtcctgccggtgctcttttgccatg
ctgcagtgcctgatgcccaacggcatcaccagcatcccggcgctggcaccgcaggagagt
gagaatgtgacagagatctacattgaaaaccaagctggccttgaaaatataacagagact
gagctcgctaactacagggagctgaagaacctcacggtcacatcctgcaggctgcggttc
atctctcccggcgccttccagaacaacgtcaagcttcagtacgtaaacctggcatccaac
tccctggagcacatcagctggagggttttccacctgctgcctctgctgaacctggttttg
aaggacaacgcgctggtctgctcgtgtgacctcttctggctgcagcagtggcagagcgac
gaccgcggcgacctggacagccaagcgctgtcctgttggtcggatgacgaggaaataccg
ctcaattctttggtgttggaaaactgcagtctgccggaggtgactatcgacttccctcaa
atcaagaccgaacaaggggggaacctcacgttcgagtgtcatgtgacgggaagtcccgcg
cccagcgtgagatggcgcaccgaaagactcgcctccgactttgtcacggagagaggtctt
tcagactccaagatgaccctggtcctctacctgaccaacgtctcctccaaggacaacctg
cacaacctgacgtgcgaggccgagaaccaagctgggcccagggaggcgatggtgcaattg
gacattgagtttcccggccggatcgtgttcctgagcgacgccgtgccgcagcacaactgg
tgcttccccttcgccgtggacggcaaccccgagcccagcgtgacctggctgtacaacggc
gccaccttcaaggagacccccttgcagtacatgcagttcatcccggacctgggcgacggc
tcggtgaagcacggctgcctcttcctcaacaagcccacccacatcaacaacggcaactac
accctgctggtggagaaccggctgggcagggacgaggccaccgccgtggggatgttcatg
gacaaccccttcccctccggggaaagcccggaggggatgattccagtcgacaagggttca
agtcccacgaacaagccggacatggacgtgacggagaccccggagagccccgtgttcgtg
gtgtctgtggccgtgggcctggccctgttcgcctgcaccttcctgctcgtcacggttctg
atcgtcaacaagtgcggccagcagtccaagttcggcatccaccgctcatcagttctgggt
accgaggacgacctggccgtgtcgcttcgcttcatgaacttcggaggcagccccccttcc
tcggatgaagactccggtctgtccagtttcgtagaaaacccacagtacttctgcggcatc
atcaaggacaaagacatgtgtgtccagcatatcaaacggcaggacatcgtgctcaagtgg
gagctgggagaaggggcttttggtaaagtctacctggccgagtgtgcaaacctcagccct
gacagcgacaagatgctggtggccatcaaaactctgaaggacgcgaacgagtcgacccgg
caggacttccagcgtgaggccgagctgctgacgatgctccagcaccaacacatcgtccgg
ttctacggcgtctgcaccgacggagagccgctggccatggtgttcgagtacatgaggcac
ggagacttgaaccgcttcctccgagctcacggccccgacgctcacatcctggaggagacg
aagatccccccgctgggccagctcacgctgcctcagatgctgcagatcgccgcccagatc
gcctcggggatggtctacctggcgtcgctgcactttgtccaccgcgacctggcaacccgc
aactgcctggtgggggagggcctggtggtgaagatcggagacttcgggatgtccagagac
atctacagcacagattactatcgggttggtggccgaacgatgctgccgatccgctggatg
ccccctgagagcatcatgtaccggaagttcacgacggagagcgatatctggagctttggc
gtggtgctctgggagatcttcacctacggcaagcagccctggtatcagctgtccaacagc
gaggccattgaatgcatcacgcagggccgggagctggagaggccgcgcacctgccccaag
gaggtgcaccagctgatgcagggctgctggcagagggagccccagcagaggacggtcatc
aaggacatccacaaccgcctgctggccctggtcaagaacccgcccgtctacctggacatc
ctgggctga
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