Cololabis saira (Pacific saury): 133439958
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Entry
133439958 CDS
T09849
Symbol
cspg5a
Name
(RefSeq) chondroitin sulfate proteoglycan 5 isoform X1
KO
K08116
chondroitin sulfate proteoglycan 5
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
csai00535
]
133439958 (cspg5a)
Proteoglycans [BR:
csai00535
]
Cell surface proteoglycans
Others
133439958 (cspg5a)
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GFIT
Motif
Pfam:
Neural_ProG_Cyt
Chon_Sulph_att
TMEM213
VWC2L_C
Motif
Other DBs
NCBI-GeneID:
133439958
NCBI-ProteinID:
XP_061573516
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Position
3:41564606..41634328
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AA seq
530 aa
AA seq
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MQRKERSVCTGCWWRLSLLSCVLALHLIPLVHGNVSETNATESDSQVNITSSVVEEEGPF
KVNEVIATVTGKSISVTSDPITTVTPRAGRLPRAGEDDDQSSGMFGETVVPTVEEVRVAS
PSQLSPDSAETELLLPGNPRGPDVVETEEGGNEEEERLPNNDPPWINAKDTDVFDLDHLF
TTTTVTPSSPTNPSNPDILHVDFFDPSSRGRSLDIAPASPSSLAHELQGGDATSWAMPEN
YDYITPYDDTVSPTEEYIDSTTTDAYESDEDLRDPVGFPDVSRPRVPGSGSFIPGASYPG
VGAPVPNGPAAEPPAVLPNGCRVGYQMVNGSCRSACDMQSNYCLNGGQCYQLDGEEIFCR
CNVQDYIWHKGARCESVVTEFQVMCLAVGASALVVLLLFMIIVCFAKKLHVLKTENKKLR
KRSSKYRPSSEQHNDNFSLSTIAEGSHPNVRKLCDTPPNVPHARALAYYDNIICQDDPNS
QNKLEDPVKAPSKEDDSLNIHNSLTPKHENHKVLGEENSSEVNSLQNNMM
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggaaggagaggagcgtttgcacgggatgctggtggagactatcgctgctgtcg
tgcgtcctggcgctgcacctgatcccgctggtccacggaaatgtctctgagaccaatgct
actgagtcagacagccaagtcaatatcacctcctcggtcgtcgaggaagaagggcctttc
aaggtaaatgaggtcatcgccacggtaaccgggaagagcatctccgtcacttctgacccc
atcaccaccgtgacaccgagggcgggccgtctcccacgtgccggcgaggacgacgaccag
agcagtggcatgttcggagaaaccgtggttcccacggtggaggaagtgagggtagcatcg
ccctctcagctcagccccgattcggctgagacggagcttctgttgcctggcaacccacgt
ggcccggacgttgtggagacggaagagggagggaatgaagaagaggagcgtctgccgaac
aacgacccaccttggatcaacgccaaggacacagatgtgtttgatctggatcatcttttc
acgaccaccaccgtcactccctcctctcccaccaacccctccaatcccgacatcctccac
gtggacttctttgacccctcctctcgtgggcgtagcttagacatagccccggcctctcca
tcttctcttgcccacgagctgcaaggtggtgatgctacttcatgggccatgccagaaaac
tatgactacattacgccctacgatgacacggtgtcccccactgaggaatacatcgacagt
actacgaccgacgcttacgagagcgatgaagaccttcgagatcccgttgggtttcctgac
gtctccaggcccagggtccccgggtctggctcttttattcccggggcgtcgtatccgggc
gtgggggctccggtaccaaacggccctgcggcagaacctccggctgtcctgcctaacgga
tgccgcgtgggataccagatggtgaacggaagttgccgctcggcctgcgacatgcaatcc
aactactgcttgaatggaggacagtgctaccagctggatggagaagagattttctgcagg
tgcaacgtccaggattacatctggcacaagggtgcgcgctgcgagtcggtggtgacggag
ttccaggtgatgtgtctggccgtgggcgcctcggctctcgtggttctgctcctcttcatg
atcatcgtctgcttcgccaagaagctccatgtgctcaagacggagaacaagaagttgcgc
aagcgcagcagtaagtaccggccttcatcggagcagcacaatgataatttctccctgtcc
accatcgctgagggctcccacccaaatgtaaggaaactgtgcgacacccctcctaacgtc
cctcatgcccgtgcattggcttactatgataacattatctgtcaggatgatcctaattcc
cagaacaagctggaggacccggtgaaggctccgtccaaggaggacgactccctaaacatc
cacaactctctgacccccaaacacgagaaccacaaggtcctgggcgaggagaactcctcg
gaggtaaactcactgcagaacaacatgatgtga
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