Cololabis saira (Pacific saury): 133440101
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Entry
133440101 CDS
T09849
Symbol
sema6e
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E isoform X1
KO
K06842
semaphorin 6
Organism
csai
Cololabis saira (Pacific saury)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
133440101
NCBI-ProteinID:
XP_061573533
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Position
3:complement(41860966..41964462)
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AA seq
1086 aa
AA seq
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MRLTPGSPPPILPAFLALAVVTILPRLSSGATPFPQDLEPISIVGRESSYLYPSFQGLMS
DNDTVRLGLDFQRMLRINHMLYIAARDHVFAVNLASSSQQIIAQQKLTWKTKDVEKCTVR
GKNSDECYNYIKVLVPRNDETLFACGTNAFNPTCRNYKMLTLEQEGEEVVGQARCPFESR
QSNVGLFAGGDFYSATMTDFLASDAVIYRSLGESSPVLRTVKYDSKWLREPHFLHAIEYG
NYVYFFFSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDS
FFYFDVLQSLTNVLQVNHRPAVLGVFTTQANSITGSAVCAFYMDDIEKAFNGKFKEQRNS
ESAWTPVPEEQVPKPRPGSCAGEGSAAAYKSSTTFPDETLTFIKSYPLMDESVPSVNDRP
YFTRTTSRFKLTQIAVDTSAGHYKNYTVVFLGSDNGHVLKILASTEGSNASFSTQLLEDI
DVYNPNKCNVRGEDRRVLGLELDRDHHALFVAFSSCVIRVPLSRCSEYNNCKKSCLSSRD
PYCIWLKAGSCVTVSPGYKGEFEQDVENGYHQHPDTCHDILATTRRQNTALDSAYGKTTP
TSASTTFHGAELPKEAGDSERGTGPERPPPVGEQGSPDSEPISVEMEGVRRPPELERTNH
SVHYTLLIACVLVAFVLGAFLSGFLVSCYCNHTGRKTKKLSKDPEAPIPHALSLRSLAKL
NGLLDSQSKEDKLEVSSPKIYNSFFTNTKEHHPPRRNGHHGMTMGDLVHPHHHHHLHHSS
ELSGLPTPDSTPELPIKSMKAFKNQWEKNQNCNNAKEPKPHNIGSRPSSALLHPQVFSYS
HSLSNGQPVVGHLHPEERKIHNVDRVLSQPYPGYSQKVMEVTSLDELLKHIHDASCSKTA
QLMSPSGLMASGGVGQLAFANRIQPHIPETESAPYYSSSTLPRDSLTRRMDVPPDIPSHH
QSTLERRHSSQRHSLIAAAAKMPSAGAMGGGGMIPRQHSFSQRNSGVHQPPPLLARMNST
GSACEVHYPLIPNGYLSRQHSYNGEQEVQHRGAIVRRAASLKPDVPPKPLFIPATSPVNE
QGKFNY
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgacgcctggatcgcctccacccatcctgccagccttcctggctctcgccgtg
gtcaccattttacctcggctgtcctcaggagcgacgccgtttccccaagacctggaacca
atcagcatcgtgggcagggaatcctcgtacctgtaccccagcttccagggtctcatgtcg
gacaacgacactgtccgcctgggtctggacttccagaggatgctgaggatcaaccacatg
ctctacatcgctgcccgggaccacgtgttcgctgtcaatcttgcaagttcatcccagcag
ataatcgcacagcagaagctgacgtggaaaacgaaggatgtggaaaagtgcaccgtgcga
gggaaaaacagcgacgaatgttacaactacatcaaagtgctggtgccacgcaacgatgag
actctgttcgcctgcggcacaaacgccttcaaccccacctgtcgtaactataagatgttg
acgctcgagcaggaaggggaggaggtggtgggacaggctcgatgtcctttcgagtcccga
cagtccaatgttggcctttttgcaggtggtgatttctactcggcaaccatgactgatttc
ttggccagcgatgccgttatttacagaagcctgggagaaagtagtcctgttctacgcaca
gtcaagtacgactccaaatggctgcgagaaccccatttcctccatgctattgagtacggg
aactacgtttacttcttcttcagcgagatcgcagtcgagtacaccactctcggcaaggtg
gttttctccagagttgcacgtgtttgtaagaacgacaacgggggttctccgagggtgctg
gagcgatactggacgtcgttcctcaaagctcgactgaactgctctgttcccggagattcc
ttcttttacttcgatgttctgcagtcgctgaccaacgtgctgcaggtcaaccaccggccg
gcggtccttggggtcttcaccactcaagcaaacagcatcaccggctcggcagtctgtgcg
ttctacatggacgacatagagaaggccttcaacggcaagttcaaggagcaaaggaacagt
gagtcggcatggacacccgttcccgaggagcaagtcccaaagccgaggccgggcagctgc
gccggagagggctctgcagccgcctacaagtcctccaccaccttccccgatgagacgctg
acatttatcaagtcgtacccgctcatggacgagtctgtcccctcggtcaacgacagaccc
tatttcacccgcaccaccagcaggttcaagctgacccagatagcggtggatacgtcagca
gggcactataagaactacacggtggtgttcctgggctcggacaacggccacgtgctgaag
atcctggccagcaccgagggctccaacgcttccttcagcacccagctcctggaggacatc
gacgtctacaacccaaacaagtgtaatgttcggggggaggaccggagggtgctgggtctg
gagttggaccgggatcatcacgccctgtttgtggcgttctccagctgtgtgatccgtgtg
ccgctcagtcgctgctccgagtacaacaactgcaagaaaagctgcttgtcttcacgggac
ccttactgcatctggctcaaggcaggcagctgtgtcacagtctctccaggttacaagggt
gaatttgaacaggatgtggagaatggctaccatcagcaccccgatacctgtcatgatatc
ttggccaccactcgcaggcaaaacacggcgctcgattccgcgtatgggaagaccacaccc
acaagcgccagcacaacctttcatggggcggagttgccaaaggaggcaggtgactctgaa
agaggtacaggtcctgaacggcctccccctgtgggggaacaagggtcacctgactcagag
ccaatcagtgtggagatggagggtgtgagacgacctccagaactggagaggaccaaccac
agtgtccattacacccttctgatagcttgtgttttggtggcctttgtccttggagccttt
ctctccgggttcctggtctcgtgctactgcaaccacactggccgcaagaccaagaagctg
tctaaagatcctgaagctccaatcccacacgccctgtcactccgaagcctggccaagctc
aacggcctcctggacagccagagtaaagaagacaagctggaggtgtcgtcgccaaagatc
tacaactccttcttcaccaataccaaggagcatcacccgccaaggagaaacggccaccat
ggcatgaccatgggagacctggttcatcctcaccatcaccaccacctccaccactcctcc
gagttgtctggcctgcctacgccagactccaccccagaactgcccattaagagcatgaaa
gccttcaaaaaccagtgggaaaagaaccagaactgcaacaatgccaaagaaccaaagcct
cacaacattggttcccggcccagctcggcacttcttcacccacaggtcttctcgtattct
cacagcttgtcaaacggccagccagtagttggtcacctgcatccagaggaacgcaaaatc
cacaatgttgaccgcgtgttatcacagccgtaccccggttactctcagaaggtgatggaa
gtaacgtcgctggatgagcttctgaagcacatccacgacgccagctgcagcaagaccgcc
cagttaatgagtccgtcaggtctgatggccagcggaggcgtaggacagctagcctttgcc
aatcgcatccagcctcatattcctgagacggagtcggccccctactacagctcctccacg
ttacctcgggacagcctcacccgccgcatggatgttcctccggacatcccctcgcaccac
cagtccaccctggagaggaggcactcttcccagcggcactcgctgatcgctgcagccgcc
aaaatgcccagtgcaggtgcgatgggcggcggaggaatgatcccccggcagcacagcttc
agccagcgcaacagcggggtccatcaaccccctccccttctggcacgaatgaactcgacg
ggcagcgcttgtgaggtgcactaccctctcatccctaacggatacctgtcccgtcagcac
agctacaacggagagcaggaggtgcagcacaggggagccatcgtccgtcgggcagcttcc
ctcaagcctgacgtccctcccaagcctctgttcatccccgccacgtcccccgtcaacgaa
caggggaagttcaactactga
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