Cololabis saira (Pacific saury): 133440140
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Entry
133440140 CDS
T09849
Symbol
lef1
Name
(RefSeq) lymphoid enhancer-binding factor 1 isoform X1
KO
K04492
lymphoid enhancer-binding factor 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04310
Wnt signaling pathway
csai04520
Adherens junction
csai04916
Melanogenesis
csai05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
133440140 (lef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
133440140 (lef1)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
133440140 (lef1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
133440140 (lef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133440140 (lef1)
Transcription factors [BR:
csai03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
133440140 (lef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
133440140
NCBI-ProteinID:
XP_061573540
LinkDB
All DBs
Position
1:complement(20580623..20629165)
Genome browser
AA seq
372 aa
AA seq
DB search
MPQLSGGGGDPELCATDEMIPFKDEGDPHKEQIFAELSHSEEEGDLADIKSSLVNESESS
PNSNSHDAARQSQIPPDSYHEKHRDHPDDGKHQDLYSKGHLYSGYPGYIMMSNMNSDSYM
NNGSLSPPMPRTSNKVPVVQPSHAVHPLTPLITYSDEHFAPGSHSGHHPQDANNKQGMPR
HHGGPDMPNFYSLSPGGVGQITPPLGWFSHHMVPGPPGPHATGIPHPAIVNPQIKHEPPH
ETDIMHMGSFFLPNRKPQHEQRKEQEPKKPHIKKPLNAFMLYMKEMRANVVAECTLKESA
AINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKMQESA
AGTGQRMKTAYI
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagttatcgggcggcggcggggacccggagctttgcgccacagatgagatgatc
ccgttcaaagacgagggagacccgcacaaggagcagatcttcgccgagctcagtcactcg
gaggaggagggagacttggcagacatcaagtcatctctggtcaacgagtcggagagcagc
cccaacagcaacagccacgacgcagctagacagtcccaaataccaccagactcgtatcat
gaaaaacacagagaccatccagacgatggaaagcatcaagatctctacagtaaaggccac
ctgtattcgggttacccaggttacatcatgatgagcaacatgaacagcgactcctacatg
aacaatggctccctctcgccgcccatgcccagaacgtccaacaaagtccccgtggtgcag
ccgtcccatgcagtccacccactcaccccgctgatcacgtacagcgacgagcacttcgct
ccgggctcgcattctggccatcacccccaagatgccaacaacaaacaaggaatgcccagg
catcatggaggaccagacatgcccaacttctactcgctgtcccctggaggagtggggcag
atcacgccacctctgggctggttctctcaccacatggtgcccggcccccctggtccccac
gccaccggtatcccccacccggcaatcgtcaacccacagatcaaacacgagcctccgcat
gaaactgacatcatgcacatgggttctttttttttgcctaacaggaagccccagcacgaa
cagagaaaggagcaggagcccaaaaagccgcacatcaagaagccgctaaacgccttcatg
ctctacatgaaagagatgcgcgccaacgtggtcgccgagtgcacgttgaaagagagcgcc
gccatcaatcagatcctgggacgaaggtggcatgctttatctcgggaagagcaagctaag
tattatgagttagcccgcaaggaacggcagctccacatgcagctctacccaggctggtcc
gctcgagacaactatggaaagaagaagaagcggaagagggagaagatgcaggaatcggcc
gcaggtacaggccagagaatgaaaacggcgtacatctga
DBGET
integrated database retrieval system
