Cololabis saira (Pacific saury): 133440284
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Entry
133440284 CDS
T09849
Symbol
lingo4b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133440284 (lingo4b)
Membrane trafficking [BR:
csai04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
133440284 (lingo4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_LRWD1
LRR_9
Ig_2
ig
LRR_Zer-1
LRRNT
V-set
LRR_EndoS
Ig_5
Motif
Other DBs
NCBI-GeneID:
133440284
NCBI-ProteinID:
XP_061573548
LinkDB
All DBs
Position
3:42733131..42770328
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AA seq
603 aa
AA seq
DB search
MFVESVVHWGAWSILLHYGLGVSAGNCPPRCMCRPEAKEVICSGKYLNSVPEGFSNDARR
LDLSRNRIKTVGRRQFSGLQQLQELDLSDNIISMIEVEAFLGLQNLRTLRIKNNRLKILP
VGVFSGLSSLRFVDLSQNEILVFLDYTFKEMTNLQRLEAGENDLVFISQRAFVGLQSLQE
LNLDRSNLTSIPTEALSQLQSLTRLRMLRLAISTLPNNAFRRLHRLRSLTISNWPALNNL
AANSLIGLNLTSLVISSCNLSAVPYATLRHLVYLRFLDLSYNPITVIQGNLLGDLLRLQE
LHLAGGSLLRIEPGAFRGLSFFRMLNVTSNQLTTLEEGAFHSVGNLQVLRLDGNPLACDC
RLLWVVRRRLRLNFDGHQPTCTFPEAVKHREFKDFSEKELPRVFTCRPARIMDRRPQEAR
VEESTTVLFSCKADGDPLPEITWVSSHKNVVTPTGRIRVLPNGTLEVRFAQVQDSGTYQC
LAGNAAGNDSLTVGLYVKGLPRNRTLPLFTEEGWVEPSNSQAANSSAQMAKPYPFDAKTL
IIATTMGFLSFLSSVAICFVFMFFWSQSKGQIKHTATIDFVPRSSVGGGGEGGDGGRFTM
KLI
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtggagtcagtcgtccactggggggcgtggagcatcctactccattatgggctc
ggcgtatctgctggaaactgtcctccacgttgcatgtgtcgacctgaggcaaaagaagtg
atatgctccggcaagtacttgaattcggtgccagagggcttttccaatgatgccagacgt
ttggatttatcccgcaataggattaagactgtgggacgccgccagttctccggtctccag
cagcttcaagagttggacctcagtgataacataatctccatgattgaagtagaggctttc
ttgggcctacagaatctcaggacacttagaattaagaacaaccgtctcaagatccttcct
gtcggggtgttctcaggcctgtccagccttcgctttgtggatttgagccaaaacgagatt
ctggtcttcttggactacacatttaaagaaatgaccaacctgcaaagactggaggccggt
gagaatgacctcgtcttcatttcccaaagggctttcgtcggtctgcagagtctacaggag
cttaacttagaccgcagcaatctgacctccattcctaccgaggccctgtctcagcttcag
agcctgacgcggcttcggatgttacgcctggccatttccacacttcccaacaatgctttc
cgacgactccatcgtttgcggagcctcacgatctcaaactggccggcactgaacaatctg
gctgctaacagcctcatcggcctgaatttgacttcgcttgtgataagtagctgtaaccta
agtgcagtcccttatgcaacactccgccatctggtgtatctgcgtttcctggatctgtcc
tacaaccccatcactgttatccaagggaacctgctaggtgacctcctgagactgcaggag
ttacatcttgcggggggaagcttgctacgaatagagccaggagcctttaggggactgtcc
ttctttcgcatgcttaatgttacttccaaccagctcactactttggaagaaggtgccttc
cattctgtggggaaccttcaggtgttacggttggacgggaatcccctcgcgtgcgactgc
cggcttctctgggtggtgcgtcgcaggttacgcttgaactttgacggacatcagcccacc
tgcacttttcctgaggcagtaaaacatcgtgaattcaaagacttctcagagaaggaactc
cctagggttttcacctgccgcccggcccgtattatggaccgcagaccacaggaggcgagg
gtggaggagagtaccacggtcctcttctcctgcaaggccgacggggatccattaccggag
atcacatgggtttcatctcataagaacgttgtcactccaacgggaaggataagagtttta
cccaacggtactctagaagtgcgttttgctcaagttcaggacagtggcacatatcagtgc
ctggcgggcaacgcggccggtaacgacagcctgactgtgggcctgtatgtgaagggactc
ccacgtaacaggactcttcctttgttcacagaggagggctgggtagagccttccaactcc
caagctgccaactcctcagcccaaatggccaagccatacccgtttgacgcaaagaccctg
atcatagccaccaccatgggcttcctgtcgttcctcagctcggtggccatctgctttgtc
ttcatgtttttctggagtcagagcaaagggcagatcaagcacacggccacaattgacttt
gttccacgttcttccgtgggaggaggaggggaaggaggggacggcgggaggtttaccatg
aaacttatataa
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