Cololabis saira (Pacific saury): 133440335
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Entry
133440335 CDS
T09849
Symbol
atg5
Name
(RefSeq) autophagy protein 5
KO
K08339
autophagy-related protein 5
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04136
Autophagy - other
csai04140
Autophagy - animal
csai04216
Ferroptosis
csai04621
NOD-like receptor signaling pathway
csai04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133440335 (atg5)
04136 Autophagy - other
133440335 (atg5)
09143 Cell growth and death
04216 Ferroptosis
133440335 (atg5)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
133440335 (atg5)
04622 RIG-I-like receptor signaling pathway
133440335 (atg5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133440335 (atg5)
03029 Mitochondrial biogenesis [BR:
csai03029
]
133440335 (atg5)
Membrane trafficking [BR:
csai04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
133440335 (atg5)
Mitochondrial biogenesis [BR:
csai03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
133440335 (atg5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_UblB
ATG5_HBR
DUF6782
Motif
Other DBs
NCBI-GeneID:
133440335
NCBI-ProteinID:
XP_061573560
LinkDB
All DBs
Position
3:complement(43239573..43292393)
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AA seq
275 aa
AA seq
DB search
MADDKDVLRDVWFGRIPTCFTLNPDEGTDREAEPYYLLLPRVSYLPLVTDKVKKHFLKVM
RPEDVEEMWFEYEGTPLKWHCPIGALFDLHASNTVLPWSITVHFKKFPDGDLLHCPSNSV
IEAHFMSSIKEADALKHKSQVVNDMQKKDHKQLWMGLQNDKFDQFWAMNRKLMEYPTEEG
GFRYIPFRIYQTRSDRPFIQKLFRPVSAEGNTHTLCDLLKEMYPDALTNEGEQKRYQVVI
HGIEPLLETPLQWLSEHLSHPDNFLHICIIPVPTD
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgacaaggacgtgttgcgagacgtttggttcggccgcatccccacctgcttc
acactgaacccggatgaggggaccgacagagaggcagagccctactatctgctgctaccc
agggtgagctacctgcctctggtcacagacaaggtgaaaaaacattttctcaaagtgatg
aggccggaggacgtggaggagatgtggtttgagtatgaaggaacacccctcaaatggcac
tgtccaattggagctttgtttgacctgcacgcctctaacacagtcttaccctggagcatc
actgtgcactttaagaaattcccagatggtgacctactccactgcccgtccaactctgtg
atagaagctcactttatgtccagcatcaaggaggctgacgccctgaagcacaagagtcaa
gttgttaacgacatgcagaaaaaagaccataaacagctgtggatgggcctgcagaatgat
aagtttgaccagttctgggccatgaacaggaagctgatggagtatccaacagaggagggc
ggcttcagatacatccccttcaggatataccagacgcggagtgacaggccgttcatccag
aaactatttcgacctgtttcagctgaaggaaatacacacactctctgtgacttactaaag
gagatgtacccggatgctctaacgaatgagggtgagcagaagcgttaccaggtggtgatc
cacggcatcgagcctctgctggagactcctctgcagtggctcagcgagcacctcagtcac
cccgacaacttcctgcacatctgcatcatccccgtccccacggattga
DBGET
integrated database retrieval system