Cololabis saira (Pacific saury): 133440383
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Entry
133440383 CDS
T09849
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csai04054
]
133440383
Pattern recognition receptors [BR:
csai04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133440383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
LRR_6
NACHT
NOD2_WH
LRR_4
SPRY
PRY
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
133440383
NCBI-ProteinID:
XP_061573613
LinkDB
All DBs
Position
3:46941501..46958865
Genome browser
AA seq
1344 aa
AA seq
DB search
MDQCEDGEEGVPPSKTSLCGEHESRSKAQRNQPGPGPGPGPGPGPGPSCVSLKSDRSTHR
YVNFKGDQRSSSERNQPGPGPGPGPGPGPGPGPGPGPGPGPESGPGPEPRPVPSWVPLKS
DRSTHRYINFKGNQGSAVNRVHQKRDSLELEPSYLSLKSDRSTHRYINFKGDQHSSSERV
DQQNSEPPSGPSVQQHQTQLDSIFLLLEDNIVLFVKNELKKIQRALSPDYPESLEHLLQG
EDEEQKKSSREAFVKITVNVLRRMKQEELAERLQRSTFAAVCKKRLKSKLKKKSRCVFEG
IVKAGNPTLLKQIYTELYITEGGTGDVNNEHEVRQIEAASRNPDRAETTIRQEDIFKLPP
GRDEPIRTVMTKGVAGIGKTVLTQKFTLDWAEGKANQDIQLLLPFTFRELNVLKERKFSL
VELVHHFFTETREICSFEEFQVVFIFDGLDESRLPLDFHNNEVLTDVTESTSVDVLLTNL
IRGNLLPSAHLWITTRPAAANQIPPECVSMVTEVRGFTNPQKEEYFKKRFREEEQTSRII
SHIKTSRSVHIMCHIPVFCWITATVLEKVLETREGGELPKTLTEMYIHFLVVQAKLKKVK
YDGGAETDPHWSPESRKMVESLGKLAFEQLQKGNLIFYEPDLRECGIDVREASVYSGVFT
QIFREESSLYQDQVFCFIHLSVQEFLAALHVHQTFIKSGVNLLEEQKDTETQLYQSAVDK
ALQSPNGHLDLFLRFLLGLSLETNQTLLRGLLEPEQRSSQNNQETVEYIKKKISKDLSAE
KSINLFHCLNELNAGSLVEEVQRSLRSGLLSTDKLSPAQWSALVFILLSSEEDLEVFDLK
KYSASEEVLLRLLPVVKASKKVVLSVCNLSGNICADLTSVLSSQSSSLTELDLSNNDLQD
SGLKKLCPGLESPHCHLESLRLSGCNLSKNICADLSSVLSSQSSSLTELDLSNNHLQDSG
LKKLCPGLESPHCHLESLRLSYCNLSENICADLSSFLSSQSSSLTELDLSNNHLQDSGLK
KLCPGLESPHCHLESLRLSVCNLSENICADLSSVLSSQSSSLTELDLSNNDLQDSGLKKL
CPGLESPHCHLESLRLSGCVISEEGCASLVSALSSNPSHLRELDLSYNHPGESVKLLSAG
LEDPRWRLDYLRVEPAGQRWMTPGLRKYSCQLTIDPKTVYKRIKLSDNNRKMTYVKEDQS
YPDHADRFDIWCQLLFREVLTGRCYWEVQRRGKVSVSVSYRRISRKGNSKDCCFGMNDHS
WSLSCSDDGRYCVWHNTRVTRCSSSSSVSDRVAVYVDVPAGTLSFYSISSDRLIHIHTFN
TTFTEPLYPGLWFRSNPGSSVSLC
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atggaccagtgtgaggacggagaggagggagtccctccctctaaaacctctctgtgtggg
gaacatgagagtcggagcaaagctcagaggaatcaacctggacctggacctggacctgga
ccaggacctggacctggacccagctgtgtttccttgaagagtgaccggtcaactcataga
tatgttaactttaaaggagaccaacgttcttcttcagagaggaatcaacctggacctgga
cctggacctggacctggacctggacctggacctggacctggacctggacctggacctgga
cctgaatccggacctggacccgaacccagacctgtacccagctgggtgcccttgaagagc
gaccgttcaactcatagatatattaactttaaaggcaaccaaggttctgctgtaaatagg
gtccatcagaaaagagactctcttgaacttgaacccagctatttgtccttgaagagcgac
cggtcaactcatagatatattaactttaaaggagaccaacattcttcttcagagagagtg
gaccagcagaactcagagcctcccagcggtccgtctgtccagcagcatcagacacagctg
gactccatatttctgttgctggaggacaacattgtcctgtttgtgaagaacgagctgaag
aagatccagagggctctgagtccagattacccagaatccctagagcatctgttgcagggt
gaggatgaagagcagaagaagagcagcagagaggcgtttgtgaagatcacagtgaacgtc
ctgaggagaatgaagcaggaggagctggctgagcgtctgcagagaagtacttttgctgca
gtttgtaaaaagcggctgaagtctaagctgaagaagaagtcccggtgtgtgtttgagggg
attgttaaagcaggaaacccaacccttctgaagcagatctacacagagctctacatcaca
gagggagggactggagacgtcaacaatgaacatgaagtcagacagattgaagcagcatcc
aggaatccagacagagcagagacaaccatcagacaggaagacatctttaaactcccacct
ggaagagatgaaccaatcagaacagtgatgacgaagggagtggccggcatcgggaaaaca
gtcctaacacagaagttcactctggactgggctgaaggcaaagccaaccaggacatccag
ttactgcttccattcaccttcagagagctgaatgtgctgaaagagagaaagttcagcttg
gtggaacttgttcatcacttcttcactgaaaccagagaaatctgcagctttgaagagttc
caggtcgtgttcatctttgacggtctggatgagagtcgacttcctctggacttccacaac
aatgaggtcctgactgatgttacagagtccacctcagtggatgtgctgctgacaaacctc
atcagggggaacctgcttccttctgctcatctctggatcaccacacgacctgcagcagcc
aatcagatccctcctgagtgtgtctccatggtgacggaggtcagagggttcactaaccca
cagaaggaggaatacttcaagaagaggttcagagaagaggaacagaccagcaggatcatc
tcccacatcaagacatcacgaagcgtccacatcatgtgccacatcccagtcttctgctgg
atcactgctacggtcctggagaaagtcctggaaaccagagagggaggggagctgcccaag
accctgactgagatgtacatccacttcctggtggtccaggccaagctgaagaaggtcaag
tatgatggaggagctgagacggatccacactggagtccagagagcaggaagatggtggag
tctctgggaaaactagcttttgagcagctgcagaaaggaaacctgatcttctatgaacca
gacctgagagagtgtggcatcgatgtcagagaggcttcagtgtactcaggagtgttcaca
cagatctttagagaggaaagcagcctgtaccaggaccaggtcttctgcttcatccatctg
agtgttcaggagtttctggctgctcttcatgtccatcagaccttcatcaagtctggagtc
aacctgctggaggaacaaaaagacacagagactcagctctatcaaagtgctgtggacaag
gccttacagagtccaaacggacacctggacttgttcctccgcttcctcctgggtctttca
ctggagaccaatcagactctcctacgaggtctgctggaaccggaacaaagaagttcacag
aacaatcaggaaacagttgaatacatcaagaagaagatcagtaaagatctgtctgcagag
aaaagcatcaacttgttccactgtctgaatgaactgaacgctggttctctggtggaggag
gtccaacggtccctgaggtcaggacttctctccacagataaactgtctcctgctcagtgg
tcggctctggtcttcatcttactgtcatcagaagaagatctggaggtgtttgacctgaag
aaatattcagcttcagaggaggttctactgaggctgctgccggtggtcaaagcctccaag
aaagttgtgttgagtgtctgtaacctctcagggaacatctgtgcagatctgacctcagtt
ctcagctctcagtcctccagtctgacagaactggacttgagtaacaacgacctgcaggat
tcaggactgaagaagctgtgtcctggactggagagtccacactgtcacctggagtctctc
aggttgagtggttgtaacctctcaaagaacatctgtgcagatctgtcctcagttctcagc
tctcagtcctccagtctgacagaactggacctgagtaacaaccacctgcaggattcagga
ctgaagaagctgtgtcctggactggagagtccacactgtcacctggagtctctcaggttg
agttactgtaatctctcagagaacatctgtgcagatctgtcctcatttctcagctctcag
tcctccagtctgacagaactggacctgagtaacaaccacctgcaggattcaggactgaag
aagctgtgtcctggactggagagtccacactgtcacctggagtctctcaggttgagtgtc
tgtaacctctcagagaacatctgtgcagatctgtcctcagttctcagctctcagtcctcc
agtctgacagaactggacctgagtaacaacgacctgcaggattcaggactgaagaagctg
tgtcctggactggagagtccacactgtcacctggagtctctcaggctgtcaggctgtgtg
atctcagaggaaggctgtgcttctctggtctcagctctgagctccaacccctcccacctg
agagagttggacctgagttacaaccatccaggagagtcagtgaagcttttgtctgctgga
ctggaggatccccgctggagactggactatctcagggtggagcctgctggacaacgatgg
atgacaccaggtctgaggaagtattcctgtcaactcaccatcgacccaaaaacagtctac
aaacgcatcaaactgtctgacaacaacaggaagatgacgtatgtgaaggaggatcagtca
tatcctgatcatgcagacaggtttgatatctggtgtcagctgctgtttagagaagttctt
acgggtcgctgttactgggaggtccagaggagaggaaaagtttctgtatcagtgagttac
agaagaatcagcaggaaaggaaactctaaagactgttgctttggaatgaacgatcattcc
tggagtctgtcatgttctgatgatggtcggtactgtgtctggcacaataccagagtaaca
cgttgctcctcctcttcctcagtctctgacagagtagcagtctatgtggacgttcctgct
ggaactctgtccttctacagcatctcctctgacagactgatccacatccacaccttcaac
accacattcactgaacctctttatcctgggttgtggttcaggtccaatccgggttcttca
gtgtctctgtgttga
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