Cololabis saira (Pacific saury): 133440384
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Entry
133440384 CDS
T09849
Name
(RefSeq) NLR family CARD domain-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csai04054
]
133440384
Pattern recognition receptors [BR:
csai04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133440384
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
LRR_6
NOD2_WH
PRY
SPRY
LRR_4
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
133440384
NCBI-ProteinID:
XP_061573618
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Position
3:44776324..44803620
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AA seq
1177 aa
AA seq
DB search
MDQCEDGEEGVPPSKTSLCGESRSKDQRNQPGPGPGPGPGPASRTGPEPGPGPGPEPSCV
SLKSDRSMDKLIHFKRDQRSAVNRVHQKGDSLEHEPSCLSLKSDWSNERFIDFKGDQHSS
SERVDQQISEPPSGPSVQQHQTQLDSIFLLLEDNIVMFVRNELKKIQRGLCPDYPESLEH
LLEGEDEDQKSSREAFVKITVNFLRRMKQEELAERLSSTFAAVCKKRLKSKLKKKSRCVF
EGIVKAGNPTLLKQIYTELYITEGGTGEVNDEHEVRQIEAASRKPDRAETTIRQEDIFKL
PSGRDELIRTVMTKGVAGIGKTVLTQKFTLDWAEGKANQDIQFLLPFTFRELNVLKERKF
SLVELVHHFFTETREMCSFEEFQVVFIFDGLDESRLPLDFHNNEVLTDVTESTSVDVLLT
NLIRGNLLPSARLWITTRPAAANQIPPECVSMVTEVRGFTNPQKEEYFKKRFREEEQTSR
IISHIKTSRSLHIMCHIPVFCWITATVLENVLETREGGELPKTLTEMYIHFLVVQAKLKR
IKYDGGVGTDPHWSPESRKMVESLGKLAFEQLQKGNLIFYEPDLRECGIDVREASVYSGV
FTQIFREESSLYQDQVFCFIHLSVQEFLAALHVHQTFIKSGVNLLEEQRNTSRWFKIKPE
TKLHQSAVDKALQSPNGHLDLFLRFLLGLSLETNQSLLRGLLEPKQRSSQNNQETVEYIK
KMISEELSAEKSINLFHCLNELNAGSLVEEVQRSLRSGLLSTDELSPAQWSALGFILLSS
EDLEVFDLKKYSASEEVLRRLLPVVKASKKVVLSGCHLSENICADLSSVLSSQSSSLTEL
DLSNNHLQDSGLKKLCPGLESPHCHLESLRLSDCNLSEDICADLTSVLSSQSSSLTELDL
SNNHLQDSGLKKLCPGLESPHCHLEYLRLSGCLISEEGCASLVSALSSNPSHLRELDLSY
NHPGESVKLLSAGLKDPRWRLDTLRVEPAGQRWLTPGLRKYSCQLTIDTNTVNKHIKLSD
NNRKMTYVKEDQSYPDHPDRFDYWDQLLCREVLMGRCYWEVQVRGGVSVSVSYRRISRKG
DSKDCVLGWNDHSWSLLCSDDGRYQVWHNNRVTSSSSSSSVSDRVAVYVDLPAGTLSFYS
ISSDRLILLHTFNTTFTEPLYPGFGFRSSSCGSVSLC
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacggagaggagggagtccctccctctaaaacctctctgtgtggg
gagagtcggagcaaagatcagaggaatcaacctggacctggacctggacctggacctgga
cctgcatccagaactggacctgaacctggacctggacctggacctgaacccagctgtgtg
tccttgaagagtgaccgatcaatggacaagttaattcactttaaaagagaccaacgttct
gctgtaaatagggtccatcagaaaggagactctcttgaacatgaacccagctgtttgtcc
ttgaagagcgactggtcaaatgaaagattcattgactttaaaggagaccaacattcttct
tcagaaagagtggaccagcagatctcagagcctcccagcggtccgtctgtccagcagcat
cagacacagctggactccatatttctgttgctggaggacaacattgtcatgtttgtgagg
aacgagctgaagaagatccagaggggtctgtgtccagattacccagaatccctagagcat
ctgttggagggtgaggatgaagaccagaagagcagcagagaggcgtttgtgaagatcaca
gtgaacttcctgaggagaatgaagcaggaggagctggctgagcgtctgagcagtactttt
gctgcagtttgtaaaaagcggctgaagtctaagctgaagaagaagtcccggtgtgtgttt
gaggggattgttaaagcaggaaacccaacccttctgaagcagatctacacagagctctac
atcacagagggagggactggagaagtcaacgatgaacatgaagtcagacagattgaagca
gcatccaggaaaccagacagagcagagacaaccatcagacaggaagacatctttaaactc
ccatctggaagagatgaactaatcagaacagtgatgacgaagggagtggccggcatcggg
aaaacagtcctaacacagaagttcactctggactgggctgaaggcaaagccaaccaggac
attcagttcctgcttccattcaccttcagagagctgaatgtgctgaaagagagaaagttc
agcttggtggaacttgttcatcacttcttcactgaaaccagagaaatgtgcagctttgaa
gagttccaggtcgtgttcatctttgacggtctggatgagagtcgacttcctctggacttc
cacaacaatgaggtcctgactgatgttacagagtccacctcagtggatgtgctgctgaca
aacctcatcagggggaacctgcttccttctgctcgtctctggatcaccacacgacccgca
gcagccaatcagatccctcctgagtgtgtttccatggtgacagaggtcagagggttcact
aacccacagaaggaggaatacttcaagaagaggttcagagaagaggagcagaccagcagg
atcatctcccacatcaagacatcacgaagcctccacatcatgtgccacatccccgtcttc
tgctggatcactgctacggtcctggagaacgtcctggagaccagagagggaggggagctg
cccaagaccctgactgagatgtacatccacttcctggtggtccaggccaaactgaagagg
attaagtatgatggaggagttgggacggatccacactggagtccagagagcaggaagatg
gtggagtctctgggaaaactggcttttgagcagctgcagaaaggaaacctgatcttctat
gaaccagacctgagagagtgtggcatcgatgtcagagaggcttcagtgtactcaggagtg
ttcacccagatctttagagaggagagcagcctgtaccaggaccaggtcttctgcttcatc
catctgagtgtccaggagtttctggctgctcttcatgtccatcagaccttcatcaagtct
ggagtcaacctgctggaggaacaaagaaacacctctagatggtttaaaataaaaccagag
actaagctccatcagagcgctgtggacaaggccttacagagtccaaatggacacctggac
ttgttcctccgcttcctcctgggtctttcactggagaccaatcagagtctcctacgaggt
ctgttggaaccaaaacaaagaagttcacagaacaatcaggaaacagttgaatacataaag
aagatgatcagtgaggagctgtctgcagagaaaagcatcaacctgttccactgtctgaat
gaactgaacgctggttctctggtggaggaggtccaacggtccctgaggtcaggacttctc
tccacagatgaactgtctcctgctcagtggtcggctctgggcttcatcttactgtcatca
gaagatctggaggtgtttgacctgaagaaatactcagcttcagaggaggttctacggagg
ctgctgccggtggtcaaagcctcaaagaaagttgtgttgagtggttgtcacctctcagag
aacatctgtgcagatctgtcctcagttctcagctctcagtcctccagtctgacagaactg
gacttgagtaacaaccacctgcaggattcaggactgaagaagctgtgtcctggactggag
agtccacactgtcacctggagtctctcaggttgagtgactgtaacctctcagaggacatc
tgtgcagatctgacctcagttctcagctctcagtcctccagtctgacagaactggacctg
agtaacaaccacctgcaggattcaggactgaagaagctgtgtcctggactggagagtcca
cactgtcacctggagtatctcaggctgtcaggctgtctgatctcagaggaaggctgtgct
tctctggtctcagctctgagctccaacccctcccacctgagagagctggacctgagctac
aaccatccaggagagtcagtgaagcttttgtctgctggactgaaggatccccgctggaga
ctggacactctcagggtggagcctgctggacaacgatggttgacaccaggtctgaggaag
tattcctgtcaactcaccatcgacacaaacacagtcaacaaacacatcaaactgtctgac
aacaacaggaagatgacgtatgtgaaggaagatcagtcatatcctgatcatccagacagg
tttgattactgggatcagctgctgtgtagagaagttctgatgggtcgctgttactgggag
gtccaggtgagaggaggagtttctgtatcagtgagttacagaagaatcagcaggaaagga
gattctaaagactgtgtgttaggatggaacgatcattcctggagtctgttatgttctgat
gatggtcggtaccaagtctggcacaataacagagtaacatcgtcctcctcctcttcctca
gtctctgacagagtagcagtgtatgtggaccttcctgctggaactctgtccttctacagc
atctcctctgacagactgatcctcctccacaccttcaacaccacattcactgaacctctt
tatcctgggttcgggttcaggtctagttcttgtggttcagtgtctctgtgttga
DBGET
integrated database retrieval system
