Cololabis saira (Pacific saury): 133440389
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Entry
133440389 CDS
T09849
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csai04054
]
133440389
Pattern recognition receptors [BR:
csai04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133440389
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
LRR_6
NOD2_WH
PRY
SPRY
LRR_4
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
133440389
NCBI-ProteinID:
XP_061573631
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Position
3:46467882..46491278
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AA seq
1082 aa
AA seq
DB search
MFVKNELKKIQRGLSPDYPESLEHLLQGEEDEQRRSSRDAFVKITVNFLRRMKQEELAER
LQRSIFAAVCKKRLRSKLKKKYQCVFEGIVKAGNPTLLKQIYTELYITEGGTGEVNYEHE
VRQIEAASRKPDRAETTIRQEDIFKLPPGRDEPIRTVMTKGVAGIGKTVLTQKFTLDWAE
GKANQDIQFLLPFTFRELNVLKERKFSLVELVHHFFTETREICFEEFQVVFIFDGLDESR
LPLDFHNNEVVTDVTESTSVDVLLTNLIRGNLLPSARLWITTRPAAANQIPPECVSMVTE
VRGFTNPQKEEYFRKRFREEEQTSRIISHIKTSRSLHIMCHIPVFCWITATVLEKVLETR
EGGELPKTLTEMYIHFLVVQVKLKKVKYDGRAETDPHWSPESRKMVESLGKLAFEQLQKG
NLIFYEQDLRECGIDVREASVYSGVFTQIFREESSLYQDQVFCFIHLSVQEFLAALHVHQ
TFIKSVVNLLEEQKNTFWWFKITDTETQLYQSAVDKALQSPNGHLDLFLRFLLGLSLETN
QTLLRGLLKPKQRSSQNNQETIKYIKKKISEDLSAEKSINLFHCLNELNDGSLVEEVQQY
LRSGRLSTDKLPPAQWSALVFILLSSEDLEVFELKKYSASEEVLQRLLPVVKDSKKVVLS
DCNLSENICADLSSVLSSQSSSLTELDLSNDHLQDSGLKKLCPGLESPHCHLESLRLSGC
HLSENICADLSSVLSSQSSSLTELDLSNNHLQDSGLKKLCPGLESPHCHLESLRLSDCNL
SETXCADLSSVLSSQYSSLTELDLSNNDLQDSGLKKLCPGLESPHCHLESLRLSGCLISE
EGCASLVSALSSNPSHLRELDLSYNHPGESAVKLLSAGLEDPRWRLDTLRMEPAGQRWMT
PGLRKYSCQLTIDTNTVHKRIKLSDNNRKIMYMWGYHLYPDHPDRFSYWFQLLCREVLTG
RCYWEVQRRGKVSVSVSYRRISRKGDFDDCRFGRNDQSWSLSCSDDGRYCVWHNNKPTSP
SSSPSVSDRVAVFVDVPAGTLSFYSVSSDRLIHLHTFNTTFTELLSPGFRFGFNPGSSVT
LC
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgaagaacgagctgaagaagatccagaggggtctgagtccagattacccagaa
tccctagagcatctgttgcagggtgaggaagacgagcagaggaggagcagcagagatgcg
tttgtgaagatcacagtgaacttcctgaggagaatgaagcaggaggagctggctgagcgt
ctgcagagaagtatttttgctgcagtttgtaaaaagcggcttaggtctaaactgaagaag
aagtaccagtgtgtgtttgaggggattgttaaagcaggaaacccaacccttctgaagcag
atctacacagagctctacatcacagagggagggactggagaggtcaactatgaacatgaa
gtcagacagattgaagcagcatccaggaaaccagacagagcagaaacaaccatcagacag
gaagacatctttaaactcccacctggaagagatgaaccaatcagaacagtgatgacgaag
ggagtggccggcatcgggaaaacagtcctaacacagaagttcactctggactgggctgaa
ggcaaagccaaccaggacatccagttcctgcttccattcaccttcagagagctgaatgtg
ctgaaagagagaaagttcagcttggtggaacttgttcatcacttcttcactgaaaccaga
gaaatctgctttgaagagttccaggtcgtgttcatctttgacggtctggatgagagtcga
cttcctctggacttccacaacaatgaggttgtgactgatgttacagagtccacctcagtg
gatgttctgctgacaaacctcatcagggggaacctgcttccttctgctcgcctctggatc
accacacgacccgcagcagccaatcagatccctcccgagtgtgtttccatggtgacagag
gtcagagggttcactaacccacagaaggaggaatacttcaggaagaggttcagagaagag
gagcagaccagcaggatcatctcccacatcaagacatcacgaagcctccacatcatgtgc
cacatcccagtcttctgctggatcactgctacggtcctggagaaagtcctggaaaccaga
gagggaggggagttgcccaagaccctgactgagatgtacatccacttcctggtggtccag
gtaaaactgaagaaggtcaagtatgatggaagagctgagacggatccacactggagtcca
gagagcaggaagatggtggagtctctgggaaaacttgcttttgagcagctgcagaaagga
aacctgatcttctatgaacaagacctgagagagtgtggcatcgatgtcagagaggcttca
gtgtactcaggagtgttcacccagatctttagagaggagagcagcctgtaccaggaccag
gtcttctgcttcatccatctgagtgtccaggagtttctggctgctcttcatgtccatcag
accttcatcaagtctgtagtcaacctgctggaggaacaaaagaacaccttctggtggttt
aaaataacagacacagagactcagctctatcaaagtgctgtggacaaggccttacagagt
cccaacggacacctggacttgttcctccgcttcctcctgggtctttcactggagaccaat
cagactctcctacgaggtctgttgaaaccaaaacaaagaagttcacagaacaatcaggaa
acaattaaatacatcaagaagaagatcagtgaggatctctctgcagagaaaagcatcaac
ctgttccactgtctgaatgaactgaacgatggttctctggtggaggaggtccaacagtac
ctgaggtcaggacgtctctcaacagataaactgcctcctgctcagtggtcggctctggtc
ttcatcttactgtcatcagaagatctggaggtgtttgagctgaagaaatactcagcttca
gaggaggttctacagaggctgctgccggtagtcaaagactccaagaaagttgtgttgagt
gactgtaacctctcagagaacatctgtgcagatctgtcctcagttctcagctctcagtcc
tccagtctgacagaactggacctgagtaatgaccacctgcaggattcaggactgaagaag
ctgtgtcctggactggagagtccacactgtcacctggagtctctcaggttgagtggttgt
cacctctcagagaacatctgtgcagatctgtcctcagttctcagctctcagtcctccagt
ctgacagaactggacctgagtaacaaccacctgcaggattcaggactgaagaagctgtgt
cctggactggagagtccacactgtcacctggagtctctcaggttgagtgactgtaacctc
tcagagacantctgtgcagatctgtcctcagttctcagctctcagtactccagtctgaca
gaactggacctgagtaacaacgacttgcaggattcaggactgaagaagctgtgtcctgga
ctggaaagtccacactgtcacctggagtctctcaggctgtcaggctgtctgatctcagag
gaaggctgtgcttctctggtctcagctctgagctccaacccctcccacctgagagagctg
gacctgagctacaaccatccaggagagtcagcagtgaagcttttgtctgctggactggag
gatccccgctggagactggacactctcaggatggagcctgctggacaacgatggatgaca
ccaggtctgaggaagtattcctgtcaactcaccatcgacacaaacacagtccacaaacgc
atcaaactgtctgacaacaacaggaaaattatgtatatgtgggggtatcatttatatcct
gatcatccagacaggtttagttactggtttcagctgctgtgtagagaagttctgacgggt
cgctgttactgggaggtccagaggagaggaaaagtttctgtatcagtgagttacagaaga
atcagcaggaaaggagactttgatgactgtaggtttggaaggaacgatcagtcctggagt
ctgtcatgttctgatgatggtcggtactgtgtctggcacaataacaaaccaacatctccc
tcctcctctccctcagtctctgacagagtagcagtgtttgtggacgttcctgctggaact
ctgtccttctacagcgtctcctctgacagactgatccacctccacaccttcaacaccaca
ttcactgaactcctctctcctgggttcaggttcgggttcaatcctggttcttcagtgact
ctgtgttga
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