Cololabis saira (Pacific saury): 133440420
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Entry
133440420 CDS
T09849
Symbol
psip1a
Name
(RefSeq) PC4 and SFRS1 interacting protein 1a isoform X1
KO
K25057
PC4 and SFRS1-interacting protein
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
133440420 (psip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csai03041
]
133440420 (psip1a)
Spliceosome [BR:
csai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
133440420 (psip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LEDGF
PWWP
Med26
Motif
Other DBs
NCBI-GeneID:
133440420
NCBI-ProteinID:
XP_061573665
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All DBs
Position
1:complement(20801427..20817300)
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AA seq
501 aa
AA seq
DB search
MARDWKPGDLIFAKMKGYPHWPARIDEVPDGAVKPSNIKFPIFFFGTHETAFLGPKDIFP
YQLNKEKYAKPNKRKGFNEGLWEIENNPKVELTAPKPVPPGTFTEKDSDSSPEAEEDAGE
KGVKSKVPGSEAEQENENVEEEEEERSLISEQGPQDQDGSAQKESTDVPKPKRGRKKKIE
TDQENEKDEAPTSPASPPGGDGVKRRGRKPKSEKLLLLQQQDHQGSGSEMDASESDKKRK
RTLEDKNQNGEEEKGKKRDDSKGRDAEVKEPEAKKKKQSKDDGSSGSDDDEKSKGRKKLQ
SSEMDKDPRRRKVDELKEPNKDDVKKNEVGAKKKEMSTDLQLQRLHSEIKISLKIDNPDV
KKCMDALDEISALQVTTQHLQKHSELIATLKKIRRFKASQDVMDKATMLYNKFKSMFLVG
EGDCVLSQVLNKSLAEQRQHEEAKKGALKRVEQVKENVTDKVTNGEMNPEEKMQEMEREK
IREDSSTGENNSVPKAPEECT
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggctcgagattggaaaccaggtgatcttatttttgccaagatgaaaggttatcctcac
tggcctgcaagaattgatgaagtaccagatggagctgtgaagccctccaacatcaagttc
cctattttcttctttggcactcatgaaactgcatttcttgggccaaaagatatctttcca
taccaactcaacaaggagaagtatgcaaaacccaacaagcggaaaggcttcaatgaagga
ctgtgggaaattgagaacaatccaaaggttgagctaactgcaccgaagccggtgccccct
gggactttcactgagaaggattcagacagcagtccagaagctgaagaggatgcaggtgaa
aaaggggtcaaatccaaagttccaggaagtgaggctgagcaggagaatgagaatgtggag
gaggaagaggaggaaaggtctctgatctctgagcagggtcctcaggaccaggatggctct
gctcagaaagagtcgacagacgttcctaaacccaagagaggcagaaagaaaaagatcgag
acagaccaagaaaatgaaaaagacgaggcaccgacgagtcctgcgagtcccccaggtgga
gatggagtaaaacgaagaggcaggaagcccaagagtgagaagttgcttttgcttcagcaa
caagaccaccagggctcaggaagtgaaatggatgctagtgagtctgacaaaaagagaaag
aggacattagaagataaaaaccaaaacggagaggaggaaaaaggaaagaaaagagacgac
agtaaaggcagggatgcagaggtcaaggagcctgaagccaagaagaagaagcagagcaag
gacgacggctcctctggctccgacgacgatgagaaaagcaaaggcagaaagaagctacag
agctcagaaatggacaaagatccacgccggcggaaagtagatgaattaaaagaaccaaac
aaagacgatgtgaagaaaaatgaagttggggccaagaaaaaggaaatgtcgaccgacttg
caacttcagagacttcacagcgaaatcaaaatttcacttaaaatcgacaaccctgatgtc
aagaagtgcatggatgctttagacgagataagtgctcttcaagtcacaactcaacacctg
cagaaacacagcgaacttattgcgaccctcaagaagatccgcagattcaaggccagccag
gatgtcatggacaaggccaccatgttgtacaacaagtttaagagcatgtttctggttgga
gaaggggattgtgtgctcagccaggtgctcaacaagtctttagctgaacagcgacaacac
gaggaagcaaagaaaggagcactaaagagagttgaacaagtcaaagaaaatgtgacagac
aaggtgactaatggtgaaatgaaccctgaagaaaagatgcaggagatggagagggagaag
attcgtgaagactcctcaacgggggaaaataacagtgttccaaaagctccggaggagtgc
acttga
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