Cololabis saira (Pacific saury): 133440468
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Entry
133440468 CDS
T09849
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csai04054
]
133440468
Pattern recognition receptors [BR:
csai04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133440468
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
LRR_6
NOD2_WH
PRY
SPRY
LRR_4
AFG1_ATPase
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
133440468
NCBI-ProteinID:
XP_061573711
LinkDB
All DBs
Position
3:complement(45768331..45796863)
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AA seq
1259 aa
AA seq
DB search
MDQCEDGEEGVPPSKTSLCGEHESRSKAQRNRPGPGAGPGPKPKLKPKPGPGPGPGPGPG
PGPGPGPGPGPGPGPGPGPSCVSLKSDQSKGLPIEFKGDQRSAVKRVYQTRDSVEHEPSC
LSLKSNQSKGMPIEFKGDQHSSSERVDQQSSEPPSGPSVQQHQTQLDSIFLLLEDNIVMF
VKNELKKIQRGLSPDYPESLEHLLEGEDEEQKSSREAFVKITVNFLRRMKQEELAERLQR
STFAAVCQKSLKSKLKKRYQCVFEGIVKAGNPTLLKQIYTELYITEGGTGEVNGEHEVRR
IEAASRKQHRAETTIRQEDIFKLPPGRHEPIRTVMTKGVAGIGKTVLTQKFSLDWAEGRA
NQEIQLLLPFTFRELNVLKERKFSLVELVHHFFPETREICSFEEFQVVFIFDGLDESRLP
LDFHNNEVLTDVRESTSVDVLLTNLIRGNLLPSARLWITTRPAAANQIPPECVSMVTEVR
GFTNPQKEEYFRKRFREEEQTSRIISHIKTSRSLHIMCHIPVFCWITATVLEKVLETREG
GELPKSLTEMYIHFLVVQVKLKKVKYDGGAGTDPHWSPESRKMVESLGKLAFEQLQKGNL
IFYEPDLRECGIDVREASVYSGVFTQIFREESSLYQDRVFCFVHLSVQEFLAALHVHQTF
IKSGVNLLKEQKNTFWWFKTRAVTDLHQSAVDKALQSPNGHLDLFLRFLLGLSLETNQTL
LRGLLEPKQRSSQNNKETVKYIKEKISEDLSAEKSINLFHCLNELNDGSLVEEVQRSLRS
GLLSTGKLSPAQWSALIFILLSSEDLEVFELKKYSASEEVLRRLLPVVKASKKVVLSGCN
LSENICADLSSVLSSQSSSLTELDLSNNHLQDSGLKKLCPGLESPHCHLESLRLSGCILS
AYICADLSSVLSSQSSSLTELDLSNNHLQDSGLKKLCPGLESPHCHLESLRLSDCNLSED
ICADLSSVLSSQSSSLTELDLSNNHMQDSGLKKLCPGLESPHCHLESLRLSGCLISEEGC
VSLVSALTSNPSHLRELDLSYNHPGESAVKLLSAGLKDPRWRLDTLRVEPAGQQWLTPDL
RKYSCQLTIDTNTVNKHINLSDNNRKMMFVWGYQSYPDHPDRFDSWYQLLCREVLTGRCY
WEVQWRRKVSVSVSYRTISRKGDSDDCRFGMNDHSWSLECSDDGRYQVWHNNRVTSSSSS
SSVSDRVAVYVDVPAGTLSFYSVSSDRLIHLHTFNTTFTEPLSPGFRFGFNPGSSVFLY
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacggagaggagggagtccctccctctaaaacctctctgtgtggg
gaacatgagagtcggagcaaagctcagaggaatcgacctggacctggagctggacctgga
cctaaacctaaacttaaacctaaacctggacctggacctggacctggacctggaccagga
cctggacctggacctggacctggacctggacctggacctggacctggacctggacccagc
tgtgtgtccttgaagagcgaccagtcaaaagggttgccaattgaatttaaaggagaccaa
cgttctgctgtaaagagggtctatcagacaagagactctgttgaacatgaacccagctgt
ttgtccttgaagagcaaccagtcaaaagggatgccaattgaatttaaaggagaccaacat
tcttcttcagagagagtggaccagcagagctcagagcctcccagtggtccgtctgtccag
cagcatcagacacagctggactccatctttctgctgctggaggacaacattgtcatgttt
gtgaagaacgagctgaagaagatccagaggggtctgagtccagattacccagaatcccta
gagcatctgttggagggtgaggatgaagagcagaagagcagcagagaggcgtttgtgaag
atcacagtgaacttcctgaggagaatgaagcaggaggagttggctgagcgtctgcagaga
agtacttttgctgcagtttgtcaaaagagtctgaagtctaagcttaagaagaggtaccag
tgtgtgtttgaggggattgttaaagcaggaaacccaacccttctgaagcagatctacaca
gagctctacatcacagagggagggactggagaggtcaacggtgaacatgaagtcagacgg
attgaagcagcatccaggaaacaacacagagcagaaactaccatcaggcaggaagacatc
tttaaactcccacctggaagacatgaaccaatcagaacagtgatgacgaagggagtggcc
ggcattgggaaaacagtcctaacacagaagttctctctggactgggctgaagggagagcc
aaccaggagatccagttactgcttccattcaccttcagagagctgaatgtgctgaaagag
agaaagttcagcttggtggaacttgttcatcacttcttccctgaaaccagagaaatctgc
agctttgaagagttccaggtcgtgttcatctttgacggtctggatgagagtcgacttcct
ctggacttccacaacaatgaggtcctgactgatgttagagagtccacctcagtggatgtg
ctgctgacaaacctcatcagggggaacctgcttccttctgctcgtctctggatcaccaca
cgacccgcagcagccaatcagatccctcctgagtgtgtctccatggtgacagaggtcaga
gggttcactaacccacagaaagaggaatacttcaggaagaggttcagagaagaggagcag
accagcaggatcatctcccacatcaagacatcacgaagcctccacatcatgtgccacatc
ccagtcttctgctggatcactgctacagtcctggagaaagtcctggaaaccagagaggga
ggggagctgcccaagtccctgactgagatgtacatccacttcctggtggtccaggtcaaa
ctgaagaaggtcaagtatgatggaggagctgggacggatccacactggagtccagagagc
aggaagatggtggagtctctgggaaaactggcatttgagcagctgcagaaaggaaacctg
atcttctatgaaccagacctgagagagtgtggcatcgatgtcagagaggcttcagtgtac
tcaggagtgttcacccagatctttagagaggagagcagcctgtaccaggaccgggtcttc
tgcttcgtccatctgagtgttcaggagtttctggctgctcttcatgtccatcagaccttc
atcaagtctggagtcaacctgctgaaggaacaaaagaacaccttctggtggtttaaaaca
agagccgtgactgacctccatcagagtgctgtggacaaggctttacagagtcccaacgga
cacctggacttgttcctccgcttcctcctgggtctttcactggagaccaatcagactctc
ctacgaggtctgttggaaccaaaacaaagaagttcacagaacaataaggaaacagttaaa
tacatcaaggagaagatcagtgaggatctgtctgcagagaaaagcatcaacctgttccac
tgtctgaatgaactgaacgatggttctctggtggaggaggtccaacggtccctgaggtca
ggacttctctccacaggtaaactgtctcctgctcagtggtcggctcttatcttcatctta
ctgtcatcagaagatctggaggtgtttgagctgaagaaatactcagcttcagaggaggtt
ctacggaggctgctgccggtggtcaaagcctccaagaaagttgtattgagtggttgtaac
ctctcagagaacatctgtgcagatctgtcctcagttctcagctctcagtcctccagtctg
acagaactggacctgagtaacaaccacctgcaggattcaggactgaagaagctgtgtcct
ggactggagagtccacactgtcacctggagtctctcaggttgagtggttgtatcctctca
gcgtacatctgtgcagatctgtcctcagttctcagctctcagtcctccagtctgacagaa
ctggacctgagtaacaaccacctgcaggattcaggactgaagaagctttgtcctggactg
gagagtccacactgtcacctggagtctctcaggttgagtgactgtaacctctcagaggat
atatgtgcagatctgtcctcagttctcagctctcagtcctccagtctgacagaactggac
ctgagtaacaaccacatgcaggattcaggactgaagaagctgtgtcctggactggagagt
ccacactgtcacctggagtctctcaggctgtcaggctgtctgatctcagaggaaggctgt
gtttctctggtctcagctctgacctccaacccctcccacctgagagagctcgacctgagc
tacaaccatccaggagagtcagcagtgaagcttttgtctgctggactgaaggatccccgc
tggagactggacactctcagggtggagcctgctggacaacaatggttgacaccagatctg
aggaagtattcctgtcaactcaccattgacacaaacacagtcaacaaacacatcaatctg
tctgacaacaacaggaagatgatgtttgtctgggggtatcagtcatatccggatcatcca
gacaggtttgattcctggtaccagctactgtgtagagaagttctgacgggtcgctgttac
tgggaggtccagtggagaagaaaagtttctgtatcagtgagttacagaacaatcagcagg
aaaggagactctgatgactgtaggtttggaatgaacgatcattcctggagtctggaatgt
tctgatgatggtcggtaccaagtctggcacaataacagagtaacatcatcctcctcctct
tcctcagtctctgacagagtagcagtgtatgtggacgttcctgctggaactctgtccttc
tacagcgtctcctctgacagactgatccacctccacaccttcaacaccacattcactgaa
cccctctctcctgggttcaggttcgggttcaatcctggttcttcagtgtttctgtattga
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