Cololabis saira (Pacific saury): 133440469
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Entry
133440469 CDS
T09849
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csai04054
]
133440469
Pattern recognition receptors [BR:
csai04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133440469
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
WHD_NOD2
LRR_6
PRY
SPRY
LRR_4
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
133440469
NCBI-ProteinID:
XP_061573712
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All DBs
Position
3:49433991..49467926
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AA seq
1130 aa
AA seq
DB search
MDQCEDGEEGVPPSKTPMCGEDESRSKAQRNQPGPRAGTGPELESRPGPSCVSLKSDRSK
GFIILFKGDQQSSSERVDQQSSEPPSGPSVQQQQTQLDSIFQLLEDNIVMFVKNELKKIQ
RGLSPDYPESLEHLLEGEDEEQRRSREAFVKITVNFLRRMKQEDLAEHLRRSTFAEDCKK
RLKSKLKKKCQCVFEGIVKAGNPALLKQIYTELYITEGGTGEVNEEHEVRQIEAASRKPD
RAETTITQEDIFKLPPGRDEPIRTVMTKGVAGIGKTVLTQKFTLDWAEGRTNQDIQFLLP
FTFRELNVLKETKFSLVELVHHFFTETREICSFEEFQVVFIFDGLDESRLPLDFHNNEVL
TDVTESTSVDVLLTNLIRGNLLPSAHLWITTRPAAASQIPPECVSMVTEVRGFTNPQKDE
YFRKRFREEEQTSRIISHIKKSRSLHIMCHIPVFCWITATVLEKVLETRERGELPKTLTE
MYIHFLVVQAKLKRVKYDGGAGTDPHWSPESRKMIKSLGKLAFEQLQKGNLIFYEPDLRE
CGIDVREASVYSGVFTQIFREESSLYQDQVFCFIHLSVQEFLAALHVHRTFIKSGVNLLE
EQRNTSRRFKTKAETKLYRSAVDKALQSPNGHLDLFLRFLLGLSLETNQTLLRGVLKPKQ
RSSQNNKETVKYIKKRISEDLSAEKSINLFHCLKELNAGSLVEHVQRSLRSGRLSTDKLS
PAQWSALGFILLSSEDLEVFDLKKYSASEEVLRRLLPVVKASKKVLLSGCNLSEDICADL
SSVLSSQSSSLTELDLSNNHLQDSGLKKLCPGLESPHCHLESLRLSDCNLSEDICANLSS
VLSSQSSSLTELDLSNNHLQDSGLKKLCPGLESPHCHLESLRLSGCLISEEGSASLVSAL
SSNPSHLRELDLSYNHPGESAVKLLSARLEDPRWRLNTLRVEPAGQRWLTPGLRKYSCQL
TIDTNTVYNKIQLSDNNRKMTRVWEDQSYPDHPDRFGYWDQLLCREVLMGRCYWEVQWRG
YVEISVSYRRISRKQDSGDCRFGRNHHSWSLECSDDGRYRVRHNKRATSSSSTFSVSDRV
AVYVDVPAGTLSFYSVSSDRLIHLQTVNTTFTEPLYPGFWFWSGSSVFLC
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacggagaggagggagtccctccctctaaaacccctatgtgtggg
gaagatgagagtcggagcaaagctcagaggaatcaacctggacccagagccggaactgga
cctgaacttgaatccagacctggacccagctgtgtgtccttgaagagtgacaggtcaaaa
ggctttataattctctttaaaggagaccaacagtcttcttcagagcgagtggaccagcag
agctcagagcctcccagcggtccgtctgtccagcagcagcagacacagctggactccatc
tttcagctgctggaggacaacattgtcatgtttgtgaagaatgagctgaagaagatccag
aggggtctgagtccagattacccagaatccctagaacatctgttggagggtgaggatgaa
gagcagaggaggagcagagaggcgtttgtgaagatcacagtgaacttcctgaggagaatg
aagcaggaggatctggctgagcatctgcggagaagtacctttgctgaagattgtaaaaag
cggctgaaatcaaagctgaagaagaagtgccagtgtgtgtttgagggaattgttaaagca
ggaaacccagcccttctgaagcagatctacacagagctctacatcacagagggagggact
ggagaggtcaacgaagaacatgaagtcagacagattgaagcagcatccaggaaaccagac
agagcagaaacaaccatcacacaggaagacatctttaaactcccacctggaagagatgaa
ccaatcagaacagtgatgacgaagggagtggccggcatcgggaaaacagtcctaacacag
aagttcactctggactgggctgaaggcagaaccaaccaggacatccagttcctgcttcca
ttcaccttcagagagctgaatgtgctgaaagagacaaagttcagcttggtggaacttgtt
catcacttcttcactgaaaccagagaaatctgcagctttgaagagttccaggtcgtgttc
atctttgacggtcttgatgagagtcgacttcctctggacttccacaacaatgaggtcctg
actgatgttacagagtccacctcagtggatgtgctgctgacaaacctcatcagggggaac
ctgcttccttctgctcatctctggatcaccacacgacccgcagcagccagtcagatccct
cctgagtgtgtctccatggtgacagaggtcagagggttcactaacccacagaaggacgaa
tacttcaggaagaggttcagagaagaagagcagaccagcaggatcatctcccacatcaag
aaatcacgaagcctccacatcatgtgccacatcccagtcttctgctggatcactgctacg
gtcctggagaaagtcctggaaaccagagagagaggggagctgcccaagaccctgactgag
atgtacatccacttcctggtggtccaggccaaactgaagagggtcaagtatgatggagga
gctgggacggatccacactggagtccagagagcaggaagatgatcaagtctctgggaaaa
ctggcttttgagcagctgcagaaaggaaacctgatcttctatgaaccagatctgagagag
tgtggcatcgatgtcagagaggcttcagtgtactcaggagtgttcacacagatctttaga
gaggagagcagcctgtaccaggaccaggtcttctgcttcatccatctgagtgttcaggag
tttctggctgctctgcatgtccatcggaccttcatcaagtctggagtcaacctgctggag
gaacaaagaaacacctctagacggtttaaaacaaaagcagagactaagctctatcggagt
gctgtggacaaggccttacagagtccaaatggacacctggacttgttcctccgcttcctc
ctgggtctttcactggagaccaatcagactctcctacgaggtgtgttgaaaccaaaacaa
agaagttcacagaacaataaggaaacagttaaatacatcaagaagaggatcagtgaggat
ctgtctgcagagaaaagcatcaacctgttccactgtctgaaagaactgaacgctggttct
ctggtggagcacgtccaacggtccctgaggtcaggacgtctctccacagataaactgtct
cctgctcagtggtcggctctgggcttcatcttactgtcatcagaagatctggaggtgttt
gacctgaagaaatactcagcttcagaggaggttctacggaggctgctaccggtggtcaaa
gcctccaagaaagttctgttgagtggttgtaacctctcagaggacatctgtgcagatctg
tcctcagttctcagctctcagtcctccagtctgacagaactggacctgagtaacaaccac
ctgcaggattcaggactgaagaagctgtgtcctggactggagagtccacactgtcacctg
gagtctctcaggttgagtgactgtaacctctcagaagacatctgtgcaaatctgtcctct
gttctcagctctcagtcctccagtctgacagaactggacctgagtaacaaccacctgcag
gattcaggactgaagaagctgtgtcctggactggagagtccacactgtcacctggagtct
ctcaggctgtcaggctgtctgatctcagaggaaggaagtgcttctctggtctcagctctg
agctccaacccctcccatctgagagagctggacctgagctacaaccatccaggagagtca
gcagtgaagcttttgtctgctagactggaggatccccgctggagactgaacactctcagg
gtggagcctgctggacaacgatggttgacaccaggtctgaggaagtattcctgtcaactc
accattgacacaaacacagtctacaacaaaatccaactgtctgacaacaacaggaagatg
acacgtgtgtgggaggatcagtcatatcctgatcatccagacagatttggttactgggat
cagctgctgtgtagagaagttctgatgggtcgctgttactgggaggtccagtggagagga
tatgttgagatatcagtgagttacagaagaatcagcaggaaacaagactctggtgactgt
aggtttggaaggaaccatcattcctggagtctggaatgttctgatgatggtcggtaccgt
gtccggcacaataagagagcaacgtcttcctcctccactttctcagtctctgacagagta
gcagtgtatgtggacgttcctgctggaactctgtccttctacagcgtgtcctctgacaga
ctgatccacctccaaaccgtcaacaccacattcactgaacctctttatcctgggttctgg
ttctggtctggttcttcagtgtttctgtgttga
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