Cololabis saira (Pacific saury): 133440486
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Entry
133440486 CDS
T09849
Symbol
thbs3a
Name
(RefSeq) thrombospondin-3a
KO
K04659
thrombospondin 2/3/4/5
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04145
Phagosome
csai04510
Focal adhesion
csai04512
ECM-receptor interaction
csai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133440486 (thbs3a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133440486 (thbs3a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
133440486 (thbs3a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
133440486 (thbs3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133440486 (thbs3a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csai04147
]
133440486 (thbs3a)
00536 Glycosaminoglycan binding proteins [BR:
csai00536
]
133440486 (thbs3a)
Membrane trafficking [BR:
csai04131
]
Endocytosis
Phagocytosis
Opsonins
133440486 (thbs3a)
Exosome [BR:
csai04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133440486 (thbs3a)
Exosomal proteins of colorectal cancer cells
133440486 (thbs3a)
Exosomal proteins of bladder cancer cells
133440486 (thbs3a)
Glycosaminoglycan binding proteins [BR:
csai00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133440486 (thbs3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF
EGF_MSP1_1
EGF_3
Motif
Other DBs
NCBI-GeneID:
133440486
NCBI-ProteinID:
XP_061573729
LinkDB
All DBs
Position
3:51392164..51434932
Genome browser
AA seq
951 aa
AA seq
DB search
MAWSVLVLLSLVWSRFTAGVPDGTDAQVIDVLGLQDSKQSVAAVEKLSGGLSALSDIYLV
STFRLPPKMGGVLLGFYSKQDNRKYLEVAVIGKINKVLVRYVRADGKIHTVNLQNANLAD
GRSHSIIVRLGGLQRSNMAAELYADCRLADSSQGLPPLVALPREADMVEIRHGQKSYARL
QGAVESLRLVLGGSVVKAGALTDCPFQGDSSDYNSVNGEINSILGDHTKALIGQLIIFNQ
ILGELRQDIREQVKEMSLIRNTILECQVCGFHEPRSRCSPNPCFKGVSCVESLQFPGFSC
GPCPPGTTGNGSHCRDEDECELQPCFSPDACVNTVGGFSCKPCPPGLWGAPLAGTGMDYA
KNHRQECVDIDECVDLPDACVSNSVCINSVGSYKCGGCKPGFHGNQSSGCFPRKSCEALT
FNPCDSNGHCAMERNGEVACRCNVGWAGNGNTCGKDTDIDGYPDRALPCMDNDKHCKQDN
CVFTPNSGQEDADNDGIGDQCDEDADGDGIKNVEDNCRLVPNKDQQNSDSDSFGDACDNC
PTVPNSDQEDTDNNGQGDACDQDIDGDGIPNVLDNCPKVPNPMQTDRDRDGVGDACDSCP
ELSNPMQTDVDNDLVGDVCDTNQDMDGDGHQDSRDNCPDIANSSQLDSDNDGLGDDCDHD
DDNDGVLDDYDNCRLIVNPYQKDSDANGVGDVCENDFDNDAVMDLVDVCPESAEVTLTDF
RAFQTVILDPEGDAQIDPSWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTV
TDDDYAGFIFGYQDSSSFYVVMWKQTEQAYWQSLPFRATAQPALQLKVVKSRTGPGEFLR
NALWHTGDTPGEVRLLWKDPRNVGWKDKTSYRWQLSHRPQVGYIRVKLFEGAVLVADSEV
LIDTTMRGGRLGVFCFSQENIIWSNLRYRCNDTVPDDFKTHRKQVLLHYQV
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggcctggtcggttctggttctgctgtctctagtctggtcccggttcacggcgggagtc
ccggacggaaccgacgctcaagtgatcgacgtgttggggctccaggactccaagcagagc
gtggccgccgtggagaagctgtcgggcggactgagcgcgctcagcgacatctacctggtc
tccaccttcaggctgccgcccaagatgggcggagtcctgctgggcttctacagcaagcag
gacaacaggaagtacctggaggtcgccgtcatcgggaagatcaataaagtcctggtccgc
tacgtgagggccgacgggaagatccacacggtgaacctgcagaacgccaacctggcggac
ggacgcagccactccatcatcgtgcgtctgggcggcctgcagcgcagcaacatggcggcg
gagctttacgccgactgccgtctggccgactccagccagggcctccccccgctggtggcg
ctgccccgggaggccgacatggtggagatccggcacggacagaagtcctacgcccggctg
cagggggcggtggagtccctccgtctggttctggggggcagcgtcgtcaaagccggagct
ctgaccgactgtccgttccaaggagactcgtcggactacaactcagtgaacggggagatc
aactccatcctgggtgatcacaccaaggctctgattggacagctcattatcttcaaccag
atcctgggagagctgcggcaggacatcagggagcaggtgaaggagatgtctctgatcaga
aacaccatcctggagtgtcaggtctgcgggttccacgagccgcgctcccgctgctccccc
aacccgtgcttcaagggcgtgtcctgcgtggagagcctgcagttcccaggattctcctgc
gggccgtgcccccccgggaccacgggcaacgggtcgcactgccgcgacgaggacgagtgc
gagctgcagccctgcttcagtccggacgcctgcgtcaacacggtgggcgggttcagctgc
aagccctgccctccgggcctgtggggggcgccgctggccgggaccgggatggactacgcc
aagaaccacagacaggagtgcgtggacatcgacgagtgcgtggatcttccagacgcctgc
gtgtcaaactccgtctgcatcaactccgtgggctcgtacaagtgcggaggctgcaaaccg
ggtttccacggcaaccagagttcgggctgctttcccaggaagtcatgtgaagcgctgacc
tttaacccctgcgactccaacggccactgcgccatggagaggaacggagaggtcgcctgc
aggtgcaacgtgggctgggccgggaacggcaacacctgcgggaaggacacggacatcgac
ggctacccggaccgcgcgctgccctgcatggacaacgacaagcactgcaaacaggacaac
tgcgtgttcaccccgaactcgggtcaggaggacgccgacaacgacggcatcggggaccag
tgtgacgaggacgcggacggagacggcatcaagaacgtggaggataactgtcgtctggtc
cccaacaaagaccagcagaactcggacagcgactcgttcggagacgcctgcgacaactgt
cccaccgtccccaacagcgaccaggaggacacggacaacaacgggcagggagacgcctgc
gaccaggacatcgacggggacgggattcccaacgttctggacaactgtccgaaggtgccg
aacccgatgcagacggacagagaccgggacggggtcggagacgcctgcgactcctgtccc
gagctcagcaaccccatgcagacggacgtggacaacgacctggtgggagacgtctgcgac
accaaccaggacatggacggagacggccaccaggacagcagggacaactgtcccgacatc
gccaacagctcccagctggactccgacaacgacggtctcggagacgactgcgaccacgac
gacgacaacgacggcgtcctggacgactacgacaactgcagactgatcgtcaacccctac
cagaaggactctgacgccaacggcgtcggagacgtctgcgagaacgacttcgacaacgac
gccgttatggatctggtggacgtgtgtccggagagcgccgaggtcacgctgacggacttc
agagccttccagacggtgatcctggaccccgagggcgacgcccagatcgaccccagctgg
gtggtgctgaatcagggcatggagatcgtccagacgatgaacagtgaccctggtttagct
gtgggctacacggccttcaacggcgtcgacttcgagggaacgttccacgtcaacacggtg
acggacgacgactacgccggcttcatcttcggctaccaggactcgtccagcttctacgtg
gtgatgtggaagcagacggagcaggcgtactggcagtccctccccttccgggccacggcg
cagcccgccctgcagctcaaggtggtgaagtcccggaccgggccgggggagttcctgagg
aacgccctgtggcacacgggagacacgcccggggaggtgcgtctgctctggaaggacccg
cgcaacgtgggctggaaggacaagacctcgtaccgctggcaactcagccaccggccgcag
gtgggctacatcagggtgaagctgtttgagggggccgtcctggtggccgactcggaggtt
ctcatcgacaccaccatgcgaggcggtcggctcggcgtcttctgcttctcccaggaaaac
atcatctggtccaacctgcgctacagatgcaacgacacggtgccggacgacttcaagact
catcgtaaacaggttctgctgcactaccaggtctga
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