Cololabis saira (Pacific saury): 133440519
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Entry
133440519 CDS
T09849
Name
(RefSeq) DENN domain-containing protein 4B-like
KO
K20163
DENN domain-containing protein 4
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133440519
Membrane trafficking [BR:
csai04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
133440519
BRITE hierarchy
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
PPR
DUF2464
SPA
Motif
Other DBs
NCBI-GeneID:
133440519
NCBI-ProteinID:
XP_061573775
LinkDB
All DBs
Position
3:complement(53487295..53537301)
Genome browser
AA seq
1531 aa
AA seq
DB search
MTEELSPQLVDYFVVAGLSPGGTWRPLDEDGRSSSSCSSSSSSSTPPSPRAPEPVTDLVV
IARGLGEDVPEGFTCIEKTLGGHQAELSAGLLNNPHLYLCYRRGRDKPPLLEIGVLYEGR
EPLKPGWYVIETTPYSRSASLSSGGGPAAHRVFLTYRRAPDSQGLHALGVTDIALLLPGK
GEVAPHTFCRVDKNLNTGMWGPALYVCYKRAVAKANALVFEAGLISRYPQQDLDSFPLPE
SVPVFCLPMGVTVESWPPNSKYQLPVFSTFVLTSACGDKVYGAAIQFYESFSADQLTERQ
CVRLGLLSVVDRRPIAGRTLHAKKSICVLSHWPFFTVFQKFLTFVYRYSISGPHVLPLEK
HVSSFMHNVPFPSPQRPRILVQLSPYDNLLLCQPVSSPLQLSGASFLKLLQNLGPDNSCT
LLLAVLTEHKLLLHSLRPDVLTAVSEALVSMSFPLRWLCPYIPLCPLQMADVLLAPMPFI
VGVHSSYFDLYDPPAEVLCVDLDTNTIFQSEVKNPLSWRSLLRKPVKSLFHTLSSLYRTL
EKICSPGQEEATLEFLLTDYDQIYRRQKQLELEIQEAFLRFMSCLLRGYRSFLLPITTAP
SDTATDCSSLFNLQGFLKSRDRNQQKFYTQMSRTQMFTQFIEECSFVSDRHACLEFFDEC
VQKVDVEKPEDVRLIDLDETHGGEHTVFIMPPEEPQEEDGSESPALYSYETFPTLRPELF
ERPQDQLRLPARGSAPSSPAPRRTKQEIKLAQKQAQKYSSVPDMWSKVLLGHVYGLWFLY
LPTFVRAEPAKVPALHAAYDVLKHMETRKVVLPDEVCYRILMQLCGQYGQPVLAVRVMLE
MKKAGVTPNTITYGYYNKAVLECKWPSTNQGGRLRWAKLRNVLLAVAQFRRPIRRRQKSG
SVGSRGEAVATPDPRPRPHSSLIRQASWSGLSESSSHESLTGPLVKSSSLSSMKTSSRTR
TSSKTLQTAETNGCRDPGSSKPPLGRRDASPRPGPPGGPVAPPRGTALSGGVRVPRSQVC
LSTFYKDCGRPSEPEPDCSCQPEDRDARSSESRETLSRSKVVDENSNTVSSPSRGGLAGK
LQQLLTPTKHRASVRRAASVGDRRPGGGGGGGGGGTGIGRRVSDQRQSRKAQVTETLLKA
KERLVNATSESSLSVGSDLDLTDTPPPAFPLRRSWDGGQEGAGMEVLMSSCSLCRSCNSL
VYDEEIMAGWTSDDSNLNSSCPFCSASFVPFLNAEICDLGPVSSAERCHWNLEDEVESAV
RPPSTQGTPPRHQCNGLSDDSSSETSSYSETSRTTTGSLAAMPPQVAVAYLSPLVLRKEL
ESLLENEGEAVLAQNQFLENHSIIFWNLLWYFQRLGLPCNLLQLVRGSPLVRHFTQSENS
AVRVRLLWDTLAPDTDQWPPLYILWRIHSGVQRRSYSWRRHNHPFSLSFLEEVLRCVGMN
EVHKAVTLFLETLAKQPGNPRTQRSLYREFLFLTLAAMGKDHVAAFDKKYKAACSRLGGT
LGKEELRRRRANPPSVKAVDCRRSFHPPLEC
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggagttgagtccccagctggtggactacttcgtggtggcgggtctgtccccc
ggggggacgtggcggccgctggacgaggacgggaggtcgtcttcgtcctgctcgtcctcc
tcgtcctcctccacccccccgtccccccgggcccccgaacccgtcaccgacctggtggtc
atcgcccgcggcctcggggaggacgtccccgagggattcacctgcatcgagaagacgctg
ggaggacaccaggcagagctgagcgccggcctgctcaacaacccgcacctgtacctgtgc
taccgccgggggagggacaaaccgcccctgctggagatcggggtgctgtacgagggccgg
gagccgctgaaaccgggctggtacgtgatcgagacgacgccctacagccgctcggccagc
ctgagctcgggcggcggcccggcggcccaccgggtcttcctcacgtaccgccgggccccg
gactcccagggcctgcacgcgctgggcgtcaccgacatcgccctgctgctgccgggcaag
ggcgaggtggcaccgcacaccttctgccgggtcgacaagaacctcaacacgggcatgtgg
ggtccagcgctctacgtctgctacaagagagccgtggccaaagccaacgccctggtgttt
gaagctggtctgatcagccggtacccgcagcaggacctggactcgttccccctgcccgag
tccgtcccggtcttctgcctccccatgggggtgacggtggagtcgtggccgcccaacagc
aagtaccagctgcccgtcttctccaccttcgtcctcacgtccgcctgcggagacaaggtt
tacggcgctgctatccagttctacgagtcgttctctgcggatcagctgacggagcgtcag
tgcgtccgtctgggtctgctcagcgtggtggaccgccggcccatcgccggccgaaccctc
cacgccaagaaaagcatctgcgtcctgtctcactggccgttcttcaccgtcttccagaag
ttcctcaccttcgtctaccgatactccatctccggaccgcacgtgctgcccctcgagaaa
cacgtctccagcttcatgcacaatgtcccgttcccgtcgccccagcggccccggatcctg
gtccagctatctccgtatgacaacctgctgctctgccagcccgtctcctcccccctgcag
ctcagcggggccagtttcctgaagctgctccagaatctgggtccggacaattcctgcact
ctcctgctggccgtcctgacagaacacaagctgctgctgcactcgctcagacctgacgtt
ctgacggctgttagtgaagccctggtgtctatgtcgttcccgctgcgctggctctgcccc
tacatcccgctgtgccccctgcagatggctgacgtgctgctggcccccatgcccttcatc
gtgggggttcactccagctacttcgacctgtacgaccccccggcagaggttctgtgtgtg
gacctggacaccaacaccatcttccagtccgaggtcaagaatccgttgtcatggcgatcg
ttgctgaggaaacccgtcaagtcgctgttccacacgctgagcagcctgtaccggaccctg
gagaagatctgcagcccgggccaggaggaggccacgctggagttcctgctcaccgactac
gaccagatctaccggcggcagaagcagctggagctggagatccaggaggcttttctgcgc
ttcatgagctgcctgctacgcggctaccgctccttcctgctgcccatcacgaccgcgccg
tccgacaccgccacggactgcagctctctcttcaacctgcaggggttcctgaagtcccgg
gaccggaaccagcagaagttctacacccagatgtcccggacccagatgttcacccagttc
atcgaggaatgttccttcgtcagcgaccgacacgcctgcctggagttcttcgacgagtgt
gtgcagaaggtggacgtggagaaacccgaggacgtccgtctgatcgacctggacgagact
cacggtggagaacacacggtgttcatcatgccccccgaggaaccgcaggaggaggacggg
tctgagagccccgccctctacagctacgagaccttccccaccctgaggccagaactgttt
gagcgaccgcaggaccagctccgcctcccggccagaggctccgcccccagcagccccgcc
ccccgccgcaccaagcaggagatcaagctggcccagaaacaggcccagaagtactcgtcg
gtgccggacatgtggtccaaggttctgctgggccacgtgtacggactctggttcctctac
ctgcccaccttcgtccgggccgagccggccaaggttccggccctgcacgctgcctacgac
gtgctgaagcacatggagacccggaaggtggtgctgccggacgaggtgtgttaccggatc
ctcatgcagctctgtggtcagtacggtcagccggtcctggcggttcgggtcatgttggag
atgaagaaggctggagttacacccaacaccatcacctacggatactacaacaaggccgtg
ctggagtgcaagtggccgtccaccaaccagggcgggcgtctccgctgggccaagctccgg
aacgtcctgctggctgtggcccagttcagacgaccaatcaggcggcggcagaagagcggc
tcggtgggcagcagaggagaagccgtggctacgcccgaccccaggccccgcccacactcc
tccctgattcgccaggccagctggagcggtttgagtgaaagctccagccacgagtccctg
actggtccgttggtgaaaagcagcagcctgagcagcatgaagacgtccagcagaaccaga
acctccagtaaaaccctccagactgcagagaccaacggctgcagggaccccggtagctcc
aagccccccctgggccggcgggacgcctccccgcggccggggccccccggtggtccggtg
gccccccccagggggacggccctttccgggggggtccgggtcccccgcagccaggtctgc
ctgtccaccttctacaaggactgtgggcggcccagcgagccggagccggactgcagctgc
cagccggaggaccgggacgccaggtcctcggagtcccgggagaccctgtcccggtccaag
gtggtggacgagaactccaacacggtgtcgtctccgagccgcgggggtctggcggggaaa
ctgcagcagctgctgacgccgaccaagcaccgcgcctcggtgcgccgcgccgccagcgtg
ggcgaccgccggcccggcgggggaggggggggaggaggaggagggacgggcatcggccga
cgcgtctccgaccagagacagtccaggaaagctcaggtcacggagacgctgctgaaggcc
aaggagaggctggtcaacgccacctcagagagctcgttgtcggtaggaagtgacctggac
ctgacggacacgccccccccggcgttcccgctccgccggtcctgggacggcggccaggag
ggagccgggatggaggtgctgatgtccagctgctcgctgtgccgcagctgcaactctctg
gtctacgacgaggagatcatggccggctggacgtccgacgactccaacctcaactcgtcc
tgcccgttctgctccgcctccttcgtgcccttcctgaacgccgagatctgcgacctcgga
cccgtcagcagtgcggagcgctgccactggaacctggaggacgaggtggagagcgccgtg
aggccccccagcacccaggggacccccccccggcaccagtgcaacggcctgagcgacgac
tccagctccgagaccagcagctactcggagaccagcagaaccaccacgggctcgctggcc
gccatgcccccccaggtggccgtggcctacctgagcccactggtcctgaggaaggagctt
gagagtctgctggagaacgagggcgaggcggttctggcccagaaccagttcctggagaac
cactccatcatcttctggaacctgctctggtacttccagagactgggcctgccctgcaac
ctgctgcagctggtgagggggtcgccgctggtcagacacttcacccagtcggagaattcg
gcggtgagagtccggctcctctgggacaccctggcccccgacacggaccagtggcccccc
ctctacatcctgtggaggatccacagtggcgtccagaggcggagctacagctggcggagg
cacaaccacccgttctccctgtccttcctggaggaggtgctgcgctgcgtcggcatgaac
gaggtgcacaaggccgtcaccctgttcctggagacgctggccaagcagccggggaacccc
aggacccagaggagtctgtaccgggagttcctgttcctcacgctggcggcgatgggcaag
gaccacgtcgctgcgtttgataagaagtacaaggcggcgtgttctcgtctgggcgggacc
ctggggaaggaggagctgcggcggcggcgcgctaacccccccagcgtcaaggccgtggac
tgcagacgcagcttccacccgccgctggagtgctga
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