Cololabis saira (Pacific saury): 133440529
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Entry
133440529 CDS
T09849
Name
(RefSeq) DENN domain-containing protein 4B-like
KO
K20163
DENN domain-containing protein 4
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133440529
Membrane trafficking [BR:
csai04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
133440529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
PPR
DUF2464
SPA
Motif
Other DBs
NCBI-GeneID:
133440529
NCBI-ProteinID:
XP_061573789
LinkDB
All DBs
Position
3:complement(54489915..54537204)
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AA seq
1547 aa
AA seq
DB search
MHSGSLLDSGEPAGGMTEELSPQLVDYFVVAGLSPGGTWRPLDEDGRSSSSCSSSSSSST
PPSPRAPEPVTDLVVIARGLGEDVPEGFTCIEKTLGGHQAELSAGLLNNPHLYLCYRRGR
DKPPLLEIGVLYEGREPLKPGWYVIETTPYSRSASLSSGGGPAAHRVFLTYRRAPDSQGL
HALGVTDIALLLPGKGEVAPHTFCRVDKNLNTGMWGPALYVCYKRAVAKANALVFEAGLI
SRYPQQDLDSFPLPESVPVFCLPMGVTVESWPPNSKYQLPVFSTFVLTSACGDKVYGAAI
QFYESFSADQLTERQCVRLGLLSVVDRRPIAGRTLHAKKSICVLSHWPFFTVFQKFLTFV
YRYSISGPHVLPLEKHVSSFMHNVPFPSPQRPRILVQLSPYDNLLLCQPVSSPLQLSGAS
FLKLLQNLGPENSCTLLLAVLTEHKLLLHSLRPDVLTAVSEALVSMSFPLRWLCPYIPLC
PLQMADVLLAPMPFIVGVHSSYFDLYDPPAEVLCVDLDTNTIFQSEDKKPLSWRSLLRKP
VKSLFNTLSSLHRTLEKICSPGQEEATLEFLLTDYDQIYRRQKQLELEIQEAFLRFMSCL
LRGYRSFLLPITTAPSDTATDCSSLFNLQGFLKSRDRNQQKFYTQMSRTQMFTQFIEECS
FVSDRHACLEFFDECVQKVDVEKPEDVRLIDLDETHGGEHTVFIMPPEEPQEEDGSESPA
LYSYETFPTLRPELFERPQDQLRLPARGSAPSSPAPRRTKQEIKLAQKQAQKYSSVPDMW
SKVLLGHVYGLWFLYLPTFVRAEPAKVPALHAAYDVLKHMETRKVVLPDEVCYRILMQLC
GQYGQPVLAVRVMLEMKKAGVTPNTITYGYYNKAVLECKWPSTNQGGRLRWAKLRNVLLA
VAQFRRPIRRRQKSGSVGSRGEAVATPDPRPRPHSSLIRQASWSGLSDSSSHESLTGPLV
KSSSLSSMKTSSRTRTSSKTLQTAETNGCRDPGSSKPPLGRRDASPRPGPPGGPVAPPRG
TALSGGVRVPRSQVCLSTFYKDCGRPSEPEPDCSCQPEDRDARSSESRETLSRSKVVDEN
SNTVSSPSRGGLAGKLQQLLTPTKHRASVRRAASVGDRRPGGGGGGGGGGGTGIGRRVSD
QRQSRKAQVTETLLKAKERLVNATSESSLSVGSDLDLTDTPPPAFPLRRSWDGGQEGAGM
EVLMSSCSLCRSCNSLVYDEEIMAGWTSDDSNLNSSCPFCSASFVPFLNAEICDLGPVSS
AERCHWNLEDEVESAVRPPSTQGTPPRHQCNGLSDDSSSETSSYSETSRTTTGSLAAMPP
QVAVAYLSPLVLRKELESLLENEGEAVLSQNQFLENHSIIFWNLLWYFQRLGLPCNLLQL
VRGSPLVRHFTQSENSAVRVRLLWDTLAPDTDQWPPLYILWRIHSGVQRRSYSWRRHNHP
FSLSFLEEVLRCVGMNEVHKAVTLFLETLAKQPGNPRTQRSLYREFLFLTLAAMGKDHVA
AFDKKYKAACSRLGGTLGKEELRRRRANPPSAKAVDCRRSFHPPLEC
NT seq
4644 nt
NT seq
+upstream
nt +downstream
nt
atgcattctgggagtttgttggacagtggggaaccagccggcggcatgacggaggagttg
agtccccagctggtggactacttcgtggtggcgggtctgtcccccggggggacgtggcgg
ccgctggacgaggacgggagatcgtcttcgtcctgctcgtcctcctcgtcctcctccacc
cccccgtccccccgggcccccgaacccgtcaccgacctggtggtcatcgcccgcggcctc
ggggaggacgtccccgagggattcacctgcatcgagaagacgctgggaggacaccaggcg
gagctgagcgccggcctgctcaacaacccgcacctgtacctgtgctaccgccgggggagg
gacaaaccgcccctgctggagatcggggtgctgtacgagggccgggagccgctgaaaccg
ggctggtacgtgatcgagacgacgccctacagccgctcggccagcctgagctcgggcggc
ggcccggcggcccaccgggtcttcctcacgtaccgccgggccccggactcccagggcctg
cacgcgctgggcgtcaccgacatcgccctgctgctgccgggcaagggcgaggtggcaccg
cacaccttctgccgggtcgacaagaacctcaacacgggcatgtggggtccagcgctctac
gtctgctacaagagagccgtggccaaagccaacgccctggtgtttgaagctggtctgatc
agccggtacccgcagcaggacctggactcgttccccctgcctgagtccgtcccggtcttc
tgtctccccatgggggtgacggtggagtcgtggccgcccaacagcaagtaccagctgccc
gtcttctccaccttcgtcctcacgtccgcctgcggagacaaggtttacggcgctgctatc
cagttctacgagtcgttctctgcggaccagctgacggagcgtcagtgcgtccgtctgggg
ctgctcagcgtggtggaccgccggcccatcgccggcagaaccctccacgccaagaaaagc
atctgcgtcctgtctcactggccgttcttcaccgtcttccagaagttcctcaccttcgtc
taccgatactccatctccggaccgcacgtgctgcccctcgagaaacacgtctccagcttc
atgcacaacgtcccgttcccgtcgccccagcggccccggatcctggtccagctgtctccg
tatgacaacctgctcctctgccagccggtctcctcccccctgcagctcagcggggccagt
ttcttgaagctgctccagaatctcggtccagagaattcctgcactctcctgctggccgtc
ctgacggaacacaagctgctgctgcactcgctcagacctgacgttctgacggctgttagt
gaagccctggtgtctatgtcgttcccgctgcgctggctctgcccctacatcccgctgtgc
cccctgcagatggctgacgtgctgctggcccccatgcccttcatcgtgggggttcactcc
agctacttcgacctgtacgaccccccggcagaggttctgtgtgtggacctggacaccaac
accatcttccagtccgaggataagaagccgttgtcgtggcgatcgttgctcaggaaaccc
gtgaagtcgctgttcaacacgctgagcagcctgcaccggaccctggagaagatctgcagc
ccgggccaggaggaggccacgctggagttcctgctcaccgactacgaccagatctaccgg
cggcagaagcagctggagctggagatccaggaggcttttctgcgcttcatgagctgcctg
ctacgcggctaccgctccttcctgctgcccatcacgaccgcgccgtccgacaccgccacg
gactgcagctccctcttcaacctgcaggggttcctgaagtcccgggaccggaaccagcag
aagttctacacccagatgtcccggacccagatgttcacccagttcatcgaggaatgttcc
ttcgtcagcgaccgacacgcctgcctggagttcttcgacgagtgtgtgcagaaggtggac
gtggagaaacccgaggacgtccgactgatcgacctggacgagactcacggtggagaacac
acggtgttcatcatgccccccgaggaaccacaggaggaggacgggtctgagagccccgcc
ctctacagctacgagaccttccccaccctgaggccagaactgttcgagcgaccgcaggac
cagctccgcctcccggccagaggctccgcccccagcagccccgccccccgccgcaccaag
caggagatcaagctggcccagaaacaggcccagaagtactcgtcggtgccggacatgtgg
tccaaggttctgctgggccacgtgtacggactctggttcctctacctgcccaccttcgtc
cgggccgagccggccaaggtcccggccctgcacgctgcctacgacgtgctgaagcacatg
gagacccggaaggtggtgctgccggacgaggtgtgttaccggatcctcatgcagctctgt
gggcagtacggccagccggtcctggcggttcgagtcatgttggagatgaagaaggctgga
gttacacccaacaccatcacctacggatactacaacaaggccgtgctggagtgcaagtgg
ccgtccaccaaccagggggggcgtctccgctgggccaagctccggaatgtcctgctggcc
gtggcccagttcagacgaccaatcaggcggcggcagaagagcggctcggtgggcagccgc
ggagaagccgtggctacgcccgaccccaggccccgcccacactcctccctgattcgccag
gccagctggagcggtttgagtgacagctccagccacgagtccctgactggtccgttggtg
aaaagcagcagcctgagcagcatgaagacgtccagcagaaccagaacctccagtaaaacc
ctccagactgcagagaccaacggctgcagggaccccggtagctccaagccccccctgggc
cggcgggacgcctccccgcggccggggccccccggtggtccggtggccccccccaggggg
acggccctctccgggggggtccgggtcccccgcagccaggtctgcctgtccaccttctac
aaggactgtgggcggcccagcgagccggagccggattgcagctgccagccggaggaccgg
gacgccaggtcctcggagtcccgggagaccctgtcccggtccaaggtggtggacgagaac
tccaacacggtgtcgtctccgagccgcgggggtctggcggggaaactgcagcagctgctg
acgccgaccaagcaccgcgcctcggtgcgccgcgccgccagcgtgggcgaccgccggccc
ggcgggggaggagggggagggggtggaggggggacgggcatcggccgacgcgtctccgac
cagagacagtccaggaaagcccaggtcacggagacgctgctgaaggccaaggagaggctg
gtcaacgccacgtcagagagctcgttgtcggtaggaagtgacctggacctgacggacacg
ccccccccggcgttcccgctccgccggtcctgggacggcggccaggagggagccgggatg
gaggtgctgatgtccagctgctcgctctgccgcagctgcaactctctggtctacgacgag
gagatcatggccggctggacgtccgacgactccaacctcaactcgtcctgccccttctgc
tccgcctccttcgtgcccttcctgaacgctgagatctgcgacctcggacccgtcagcagt
gcggagcgctgccactggaacctggaggacgaggtggagagcgccgtgaggccccccagc
acccaggggacccccccccggcaccagtgcaacggcctgagcgacgactccagctccgag
accagcagctactcggagaccagcagaaccaccacgggctcgctggccgccatgcccccc
caggtggccgtggcctacctgagcccgctggtcctgaggaaggagctggagagtctgctg
gagaacgagggcgaggcggttctgtcccagaaccagttcctggagaaccactccatcatc
ttctggaacctgctctggtacttccagagactgggactgccctgcaacttgctgcagctg
gtgagggggtcgccgctggtcagacacttcacccagtcggagaactcggcggtgagagtc
cggctcctctgggacacgctggcccccgacacggaccagtggccccccctctacatcctg
tggaggatccacagtggcgtccagaggcggagctacagctggcggagacacaaccacccg
ttctccctgtccttcctggaggaggtgctgcgctgcgtcggcatgaacgaggtgcacaag
gccgtcaccctgttcctggagacgctggccaagcagccggggaacccgcggacccagagg
agtctctaccgggagttcctgttcctgacgctggcggcgatgggcaaggaccacgtcgct
gcgtttgataagaagtacaaggcggcgtgttctcgtctgggcgggaccctggggaaggag
gagctgcggcggcggcgcgctaacccccccagcgccaaggccgtggactgcagacgcagc
ttccacccgccgctggagtgctga
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