Cololabis saira (Pacific saury): 133440660
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Entry
133440660 CDS
T09849
Symbol
col28a1b
Name
(RefSeq) collagen, type XXVIII, alpha 1b
KO
K23619
collagen type XXVIII alpha
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csai01002
]
133440660 (col28a1b)
Peptidases and inhibitors [BR:
csai01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
133440660 (col28a1b)
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Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
Motif
Other DBs
NCBI-GeneID:
133440660
NCBI-ProteinID:
XP_061573967
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Position
3:complement(40041595..40071758)
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AA seq
1219 aa
AA seq
DB search
MTLIKCSIYFVTNQENENLAEMLLRRHLSRGLLVCLLLLALLHDATSQRRQAARRNNHRQ
RDEGTHASLTCSLDVVFILDSSESAKLRLFQQQKAFVLSFSTRLAMLQVSSMFQVNWALK
VRMAALQFSSSVYIEHRFSAWKDLDSFQDKVSNMYYIGHGTYTTYAITNTTQLVLQESPK
QSVRMAVLMTDGVDHPRNPDVMPAATEAKSYGIKFFSIGLSDIAQKSQNAAKLRTIASSP
AQQFVQSLQDPELEDKLLKEMSAVAIEECPQVCLCEKGERGPPGNPGRKGDQGDLGPPGQ
KGTRGEPGYDGRPGVDGPQGPPGYKGNKGERGECGPPGKKGEIGAEGPPGPTGAKGDEGG
EGPIGDVGPEGPAGPKGDRGYTGAPGPPGDIGIGFPGPKGDKGLQGRPGSTGPPGIGEPG
LPGPSGPAGAKGNSGLTGEGLPGQKGDRGFGGPPGSRGLPGVGIKGDKGVRGPSGPQGTV
GATGIGLQGEKGDRGPPGPVGPRGASGIGLMGPKGNQGPTGEPGLTGERGQGDTGPKGEP
GTKGLPGISGLPGEDGIPGPKGDIGLTGIRGLDGPTGKGVPGVKGDKGDRGSRGQPGSVG
PPGPMGPKGERGNTGSPGITGPPGRGLTGVKGEMGPQGPPGQLGETGIGLPGPKGDRGLQ
GPSGPTGPKGEGLLGPPGLPGSPGMTGEPGQDGIGLPGDKGDRGLSGPPGSDGPPGVGLI
GPKGSVGQMGPPGLQGLAGEGIQGSKGDPGDQGLPGPRGPPGQGVQGEKGDRGFRGLTGK
KGDRGEPGNEGNIGPVGRAGEKGDAGLTRDEIIEIVRSLCNCGKKCIQTPLELIFVIDSS
ESVGPDNFNMIKDFVNALIDRTSVGRDSARIGVLLYSHINEEVVRLVEEASQDDIKSKVR
SMNYLGEGTYTGSAVHKANQMFKMSRTGVRKVAIIITDGQADKRDLISLETAVNEAKESN
IEMFVIGVVNESDPFFEEFKKELMFIASDPDNEHLYLIDDFRTLQGLEKLLLTCVFELGQ
SKLFGPMPSSEQALGFPEIFSIRKPPYRPGPGTPTFTGDFRRVQMMPDSSASKSTKESLK
LQRPKISEDRTLSKTQRFPFFDREPFRPVTEFLPQFEMNNPTRHINGAIGPAGPTLRALP
EEEMPAPSPPTPQLLPSDTQTSEESCNQILDPGPCRDYVVMWYYDAIANSCAQFWFGGCL
GNKNRFDTEKTCRETCAKV
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgactttaatcaaatgcagcatctactttgtcacaaaccaagaaaatgagaacctggca
gaaatgttgctgaggagacacttgagcagaggactgctggtatgccttctgctgctggct
ctccttcacgatgccacgagccagagaagacaggcagcacgcaggaacaaccacagacaa
cgtgatgaaggaacacatgctagtctcacatgttcactggatgtggtcttcatcctggac
agctcagagagtgcaaagttacgcctgttccagcagcagaaggcctttgtgttgagcttc
agcacccggctggccatgctgcaggtcagctccatgtttcaggtgaactgggcgctgaag
gtgcgaatggccgcccttcagttcagcagctccgtatacatagagcacagattctcagcc
tggaaggacctggattcgttccaagacaaagtcagcaacatgtactacatcggccacggc
acctacaccacctacgccatcaccaacaccacgcagctggtgttgcaggagtcccccaag
cagagtgtcaggatggcagtgctgatgactgacggagtggatcacccgcgtaaccctgac
gtgatgcccgcggcaacggaggccaagagctacggcatcaagttcttctccatcgggttg
tctgacatcgcccagaagagtcagaacgctgccaagctccggaccatcgccagctctcct
gctcagcagtttgtccaaagtcttcaggaccccgagctggaagataagctgctcaaagag
atgagtgcagttgccatcgaagagtgtcctcaggtgtgtctgtgtgaaaaaggagaaaga
ggccctccgggaaatcctggtagaaaaggagaccaaggggatctcggaccgcctggtcaa
aaaggaacaaggggtgaaccgggctatgatggtcgacctggagttgacggtccgcagggc
cctccagggtataagggcaacaagggggagagaggagaatgtggtcctcctggtaaaaag
ggtgaaattggagctgagggacctccaggccccacaggagcaaaaggagatgagggtgga
gaaggaccaataggagacgtcggtcctgaggggccagcgggacctaaaggagacaggggg
tacacgggtgcacctggaccaccaggagacattgggattggattcccaggacccaagggt
gataaaggtcttcagggcagaccaggttccactggtcctcctgggatcggagaaccagga
ctgcctggaccatcaggaccagctggagcaaaaggaaactctggacttaccggagagggg
cttccaggacagaaaggtgatcgaggattcggtggtccacctggtagtcgtgggcttcct
ggtgttggaatcaaaggcgacaagggtgttcgtgggccatctgggcctcaaggcacagtt
ggagctacggggataggactccaaggagaaaagggagaccggggcccacctggacctgta
ggaccaagaggagcttcaggtattggactaatgggacctaaggggaatcagggtcccacc
ggcgagcccggactgacaggtgaaagaggtcagggagatacaggacccaagggtgaacca
ggaacgaagggtttaccaggaatatcaggcttaccgggagaggatgggatcccaggacca
aagggggacataggattgacggggatcaggggtctcgatgggcccactggtaaaggagtc
cctggagtgaagggagacaagggcgacaggggcagccgaggtcagccagggtccgtcggc
cctccgggacccatgggaccaaagggagaacggggaaatactgggtctccaggaataact
ggccctccaggacggggcctgaccggtgtcaagggggaaatgggtccacaaggtcctcct
ggacaattgggagagacagggattggtttacctggacccaagggtgacagagggctacaa
gggcctagtgggccgactgggccgaaaggtgaagggctcctcggccccccaggacttcca
gggtcccctggcatgacaggagagcctggacaggatggcatcggtttaccgggagacaag
ggagacagaggcttgtctggacctcctggatctgatgggccaccaggagtaggtctgatc
ggtccaaagggttcagttggtcagatgggaccgccgggtcttcaggggctagctggagaa
ggcatacaaggatcaaagggggatccaggagaccagggactccctggacccagaggtcct
ccaggacaaggtgtgcagggagaaaagggggatcgaggcttcagaggtttgacgggcaaa
aaaggagacagaggggaacctggaaatgaaggaaacatcgggcctgtgggcagagctgga
gagaaaggagatgctggactcacgagggatgagatcatcgaaatagtgagatccttatgc
aattgcgggaagaagtgcatccaaacacctttggagctgatttttgtgatcgacagctct
gagagtgtcggccctgacaacttcaacatgatcaaagactttgtgaacgccctgatcgac
cgcacatcggtgggccgggacagcgcgcgcatcggcgtgctcctgtacagccacatcaac
gaggaggtcgtcaggctggtggaggaggcctcgcaggatgacatcaaatccaaagtgcgc
tccatgaactacctgggtgagggaacctacacgggcagcgcagtccacaaggccaaccag
atgttcaaaatgtcacggacgggcgtgaggaaggtggctataatcatcacggacggacag
gccgataagagggacttgatcagcctggagaccgccgtgaacgaagccaaagaaagcaac
attgagatgtttgtgatcggggtggtgaacgagagtgaccccttctttgaggagttcaag
aaggagctcatgtttatagcctctgatcctgacaacgaacatttgtacctgattgacgac
ttccgaacccttcaaggtctggagaaactattgctgacttgtgtctttgaactggggcag
agtaagttgttcggccccatgccgagctcagaacaggctctgggattcccagagatcttc
agcattcgaaaacccccgtaccggccaggcccgggcacgcccaccttcacaggagacttc
aggagggtccagatgatgcccgactcttcagcatccaagtccaccaaagaatccctcaaa
ctacagagacccaagatcagcgaagacagaaccctctccaaaacacaaaggtttcccttc
ttcgacagggagcccttcaggcccgtaacagaatttctcccacagtttgagatgaacaac
cccacgcgccacatcaacggagccatcgggcccgctggtcccacgctgagggccctgccg
gaggaggagatgcctgcaccgtctccacccactccccagctgctgccctcggacacccaa
acatcagaagaaagctgcaaccagatcctggacccgggtccgtgtcgggactacgtggtg
atgtggtactacgacgccatcgccaactcctgcgctcagttctggtttggaggttgtcta
ggaaacaagaaccggtttgatacggagaagacctgcagggaaacctgcgcgaaggtctga
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integrated database retrieval system