Cololabis saira (Pacific saury): 133440773
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Entry
133440773 CDS
T09849
Name
(RefSeq) semaphorin-4A-like
KO
K06521
semaphorin 4
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
csai04090
]
133440773
CD molecules [BR:
csai04090
]
Proteins
133440773
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sema
CD20
PSI
Ig_2
Ig_3
V-set
Motif
Other DBs
NCBI-GeneID:
133440773
NCBI-ProteinID:
XP_061574075
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All DBs
Position
3:complement(50920741..50983866)
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AA seq
1050 aa
AA seq
DB search
MASSVPVQVLVLVLVLVPAGSQSPPRISFLLGSPDRPLFHFSLPGLHNSTTLLLSADGET
LYVGARDAVLELDVSSDVISLRRKVQWSPTAEEKKLCSDKGKDPTVDCTNFIHVLQQINS
THLYACGSHAFNPRHAFIDLERFSVEGQAVAKGRCPFSPFQRSVAATIDGEMFSASSTDF
FGAKPQISRFFSKDGRPDVGLESGASLLEEPEFVSSSLDAAERKLYLFFSEVGKEFSFVD
ELRVGRVAQVCKDDVGGERTLQKRWTSFSKAPLLCRPPGRLPFSLLQDVFTLPPAGGDTD
DHTLFYGVFTSQWSAQPESAVCVFRLQDVRDVFRGNYRTLDVNTHQWSQLREPRPFLGQC
GLSSSPDSVLMQVKSSFLTSGSVRPAGTGTGTGPAAVFPGQRYTRVAAMRTTAADGGRYT
VLFLLTESGFLHKAVPSDRGLRVVEEIQVFTEPQLAKSLVLSPSKGVVLVGLSSGVTAVP
LARCSVYRTCGQCLLARDPLCGWSRTRGTCSGLEPGSDDTIQNLDDGSVAEKCAGEDEDV
PPQDITVAPGDAVTLPCPRPSRLAVLSWTWSRDGDQVQVQVQDQDRVLPGRRFLVRPDGG
LSFLAAAETASASYRCGAEEDGFSWPVARYRVGLRAGPRAPGGLGGPDPVPDPVPDPVPV
PRVAVTTVPPATAKGSNIRGRTRNIQEDQNRDPGLQGPAAPPRPHGRRLRPPAVRGAELP
RGAGSGVAPAGRLPAGSGLRVRPGLETQQNRDQGAGGLQQDQHGDLLPDPPVGPGGGRGA
RGPVPTRTDPNSSAGVSTVAMATATTSVTKVGGVTIVTQFIPGDDSSPSIPLQSPASPSP
EATPPPLKAPPTPTRTEKKAAIFLRGEPQALGVVQVFVGLLGVLFSLTAAYSPALIRYAP
LASAAAFLVSGSLAVAAGRRTSVVLVWASLLSNVSSVLVALGGVAYLCCLLGSAPAAQVL
CGPHSPNPEEDKWTKLCMGLLGPLNVVLYGILGLLLVLFLLQVAVAAAVCVFSGKVIRRY
RRYRPVQVEADDVSRLLTSAPGSPDHLITG
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttccgtccccgtccaggtcctggtcctggttctggtcctggtccccgccggc
tcccagagtcctccccggatctccttcctgctcgggtccccggaccggcccctgttccac
ttcagcctccccggcctccacaactccaccacgctgctgctcagcgccgacggggaaacg
ctgtacgtcggggcgagggacgccgtgctggagctggacgtcagcagtgatgtcatcagc
ctgaggaggaaggtccagtggagtccgacggccgaggaaaagaaactctgcagcgacaag
gggaaggacccgaccgtggactgcaccaacttcatccacgtgctgcagcagatcaactcc
acccacctgtacgcctgcgggagccacgccttcaaccccagacacgccttcatcgacctg
gagcgcttctccgtggagggacaggcggttgccaaaggtcgctgtccgttcagccctttc
cagaggagcgtcgccgccaccatcgatggagaaatgttctccgcctcgtccaccgacttc
ttcggggccaaacctcagatttctagattcttcagcaaagacggacgtccagacgttgga
ctggagtccggggccagcctgctggaggagccggagttcgtcagctcgtctctggacgcg
gcggagaggaagctctacttgttcttcagcgaggtggggaaggagttcagcttcgtggac
gagctgcgggtcggccgcgtggcccaggtctgcaaggacgacgtgggcggcgagcggacg
ctgcagaagagatggacgtccttctccaaggccccgctgctctgccggccccccgggcgg
ctgcccttcagcctcctgcaggacgtgttcaccctcccgcctgcagggggcgacaccgac
gaccacacgctgttctacggagtcttcacctcccagtggtctgcacagccggagtcggcc
gtctgcgtcttccggctgcaggacgtccgggacgtcttcagggggaactacaggacgctg
gacgtcaacacccaccagtggagccagctgcgggagccacgccccttcctgggacagtgc
ggtctgtcctcgtccccggacagcgtcctgatgcaggtcaagtcctccttcctgacctcc
ggcagcgtgaggcccgccggcaccggcaccggcaccgggccggccgccgtgtttccgggg
caacggtacacccgcgtggcggccatgaggacgacggcggccgacgggggacgatacacg
gtcctgttcctgctgacagagtccgggttcctgcacaaggcggttccgtctgatcggggt
ctccgggtcgttgaggagatccaggtgtttacagaacctcagctggccaagagtctggtt
ctgtccccgtccaagggcgtggttctggtgggcctgtcctccggcgtgacggcggtaccg
ctggcccgctgctccgtctaccggacctgtggtcagtgtctgctggcccgggacccgctg
tgtggctggagccggacccgggggacctgcagcggcctggagcccggttctgatgacacg
atccagaacctggacgacggcagcgtggcggagaaatgtgctggcgaggacgaggacgtc
ccgccccaagacatcaccgttgcccccggcgacgcggtgacgctgccgtgtcccagaccg
tcccggctggccgtgctgagctggacctggtcccgggacggggaccaggtccaggtccag
gtccaggaccaggaccgggtcctgccgggccggcggttcctggtccggcccgacggcggc
ctgagcttcctggcggcggcggagacggcgtcggcctcgtaccgctgcggcgccgaggag
gacgggttcagctggccggtggcccggtaccgggtcgggctgagggccgggccgcgggcc
cccggaggcctggggggcccggacccggtcccagacccggtcccagacccggtcccggtc
ccgagggtcgccgtgacgacagtcccgccggctacggccaaggggtccaacataaggggc
cggacccggaacatccaggaggaccagaaccgggacccgggtctgcaggggcccgcggcc
cccccccgcccacacggacggaggctccgccccccagctgtccggggggcggagctacca
cggggagctggttctggtgtcgctcctgctggccgcctgcctgctggttctggtctccgg
gtccgtcctggtctggagacgcagcagaaccgggaccaaggtgcaggaggactgcagcaa
gaccagcatggagatctgctccctgacccccccgtagggcccggggggggccggggggcc
cgggggccggtaccgacccgtacagacccgaattcatctgccggggtctccaccgtcgcc
atggcgaccgccactacctccgtcaccaaagtgggcggagtcacgatcgtgacgcagttc
atccccggagatgactcctccccctccattccgctgcagagccccgcctccccttcaccc
gaggccacgccccctcccctgaaggccccgcccactcccaccaggacggagaagaaggcg
gccattttcctccggggggaaccgcaggccctgggggtggtccaggtcttcgtggggctg
ctgggagttctgttcagcctgaccgccgcctactcgccggcgctgatccgctacgccccg
ctggcctcggccgccgccttcctggtctccgggtctctggccgtggctgcaggcagacgg
acctcagtggttctggtgtgggcgtcgctgctctccaacgtgtccagcgtgctggtggcc
ctggggggcgtggcctacctgtgctgcctgctaggctccgcccccgccgcccaggtgttg
tgtgggccccactcccccaacccggaggaagacaagtggacgaagctctgcatgggcctg
ctggggccgctgaacgtggttctgtacgggatcctgggcctcctgctggtcctgttcctc
ctgcaggtcgccgtcgccgccgccgtctgcgtcttctctgggaaggtgatccggcgctac
cggcgctaccgacccgtccaggtggaggctgatgatgtcagcaggctgctgacctctgca
cctggatcacctgatcacctgatcaccggttga
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