Cololabis saira (Pacific saury): 133440871
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Entry
133440871 CDS
T09849
Symbol
dcaf13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csai03009
]
133440871 (dcaf13)
04121 Ubiquitin system [BR:
csai04121
]
133440871 (dcaf13)
Ribosome biogenesis [BR:
csai03009
]
Eukaryotic type
90S particles
Other 90S particles
133440871 (dcaf13)
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
133440871 (dcaf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Sof1
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
eIF2A
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
KNTC1_N
MIOS_WD40
NBCH_WD40
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
133440871
NCBI-ProteinID:
XP_061574183
LinkDB
All DBs
Position
3:complement(11395218..11409765)
Genome browser
AA seq
445 aa
AA seq
DB search
MKVKVLSRNPDDYVRETKLDIQRVPRNYDPSLHPFEVSREYSRALNATKLERVFAKPFLA
SLEGHRDGVNCMAKHTKSLSTLLSGSCDGEVKVWNLTKHESVRTLQAHEGFVRGMVVRHC
GNSFFTVGDDQTIKQWKMEAPGYGEEEEPLNTILGKTVFTGLDHHRTDGVFATCGQQVDI
WDEQRSTPIRSFTWGVDSFSAIRFNPVETELLASCASDRSIVLYDMRDSAPLKKVIMTMR
TNTLCWNPMEAYYFTCANEDYNLYTYDMRYLEKPMLVHMDHVSAVLDVDYSPTGQEFVSA
SFDKTIRIFPKDGGHSREVYHTKRMQHVICVKWSADSKYILSGSDEMNIRLWKAQAAEKL
GVLAPRQRQAANYSQKLKQKFQHHPQIQRIHRHRHLPKNIYHQSKELRIMKEARRQKEIN
VRKHSKPGTVPAVCEKEKHVVTVVK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttaaagtcctttcaagaaacccggatgactatgtccgggagaccaaactggat
atccagcgtgtccccaggaactatgacccgtcccttcatccgttcgaggtgagcagagag
tacagccgggctctgaatgccaccaagctggagcgggtgtttgccaagccgttcctggcg
tccctggagggccacagggatggggtgaactgtatggccaagcacaccaagagtctctcc
accctgctgtcgggctcctgcgacggcgaggtgaaagtgtggaatctcaccaagcatgaa
agcgtccggactcttcaagcacatgaaggttttgtgcgagggatggttgtcagacactgt
ggaaattctttctttacagttggtgatgaccaaacaatcaagcaatggaaaatggaagca
ccgggttatggagaggaagaggagccacttaacactatcctgggcaagacggtgttcaca
gggctggaccatcaccgaacagatggtgtatttgcaacatgtggccagcaggtggacatc
tgggatgagcagagaagcacccccatccgctcctttacttggggtgtagacagcttcagc
gccatccgcttcaaccctgtggagacggaacttcttgcaagctgtgcctctgacagaagt
atagttttatatgacatgcgagactcggcaccacttaaaaaggttatcatgacaatgagg
accaacactttatgctggaaccccatggaagcctattactttacatgtgcaaatgaagac
tataatctgtacacatatgacatgaggtacctggagaagcccatgttggtacacatggac
cacgtgtctgcagttctagatgtggactattctcccactgggcaggaatttgtgtctgcc
agtttcgacaagaccattcgcatcttccccaaggacggcgggcacagcagggaggtctac
cacaccaagcgcatgcagcacgtcatctgcgtgaagtggtcggcagacagcaagtacatc
ctgagcggttctgatgaaatgaacatccgactctggaaagcccaagcagccgagaaactg
ggagtgctggctcccaggcagagacaggcggccaactacagtcagaagctgaagcagaag
ttccagcaccatcctcagatccaacgcatccaccgtcaccgacatctgcccaagaacatc
taccaccagagcaaggagctgaggatcatgaaggaggcccgccggcaaaaggagataaat
gtccgcaagcacagcaaaccaggaaccgttcctgcggtgtgtgagaaggaaaagcacgtt
gtcacggtggtgaaataa
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