Cololabis saira (Pacific saury): 133440882
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Entry
133440882 CDS
T09849
Symbol
ube3d
Name
(RefSeq) E3 ubiquitin-protein ligase E3D
KO
K20803
ubiquitin-protein ligase E3 D [EC:
2.3.2.26
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133440882 (ube3d)
Enzymes [BR:
csai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
133440882 (ube3d)
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
HECT type E3
133440882 (ube3d)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HECT_2
DUF4187
Yippee-Mis18
Motif
Other DBs
NCBI-GeneID:
133440882
NCBI-ProteinID:
XP_061574197
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All DBs
Position
3:12344239..12380902
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AA seq
399 aa
AA seq
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MAEEEQTQTRGVGVFLELRKRLQSGLLIVGRDVARNPADVVVSGRDSSLEVRTPGWELSL
SLPAGVAFEQGSCILTPSGESSEEELHFRLRITVGKNTDDDVSDSVMETLRAKETYCFYC
QGCQTRLLEDRVFKRVLPLPNCNWNAIVDDWCCHPDPFAKKLLPRAEDCLQGDTYILLAR
DGSCSQTLTQEVSSVETADSQDQKKTCRRLALISCSSCSSVLGEAVAPETLKLYITQVVV
ETATGDQKLEASLNRSGFLERTVAARLLKLSNSLSTFHFSVQTPDGKAFLLLWLLNSDSI
VASVPEKCIGEESSIISTDPHGPPARAARALKLLYITCSDADIQQREIVTSWDASAIGHP
VVLPLKVCEELLRVIDGSNSTLPASMRHMRSYEVAYLRL
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggaggagcaaacccagacacgtggagttggagtgtttttagagctgagaaaa
aggctgcagagtggacttctgatcgttgggagagacgtggccagaaaccctgccgatgtg
gtcgtgtcagggagagactcctctctcgaggtcaggactcccggatgggagctgagcctg
agtttaccagcaggagtcgccttcgagcaggggtcttgtatcttaacaccctcgggagaa
tccagtgaggaggagctgcactttcgactgcgcatcactgttggaaaaaacacagatgac
gacgtgtctgacagcgtgatggagactctgcgagcgaaagagacttactgcttctactgc
cagggctgccaaacccggctgctggaggacagagtgtttaagcgggttcttccgctccct
aattgcaattggaatgccatcgtggacgactggtgttgccatccggacccgtttgccaag
aagctgttgccccgagcagaggattgcttacagggtgacacctacatcctcctcgccaga
gacggcagctgcagccaaacgctgacccaggaagtgagctctgtggagacagcggacagt
caagatcagaagaaaacctgtcgccgcttggcacttatctcctgctcaagctgttcatca
gtgctgggagaggctgtggcaccagagacgctgaaactgtacatcacacaggtggtggtg
gagactgccacgggagatcaaaagctagaggcttcactgaacaggtctggcttcctggag
aggacggtagcagcgagactgctgaagctctccaactcactgagcaccttccacttctca
gttcagacgccagatggaaaagccttcctactgctctggctgctcaacagtgactccatc
gtagcctcagtgccagagaagtgtatcggcgaggaaagctccatcatcagcaccgatcct
cacggtccaccagccagagctgccagagccctgaaactcctctacatcacctgctccgat
gcagatatccagcagagagagattgttactagctgggatgccagtgccatcggacacccc
gtggtgctgccgctgaaggtgtgcgaggagctgctgcgagtgatagatggcagcaactct
acgcttcctgcctcaatgcgtcacatgaggtcttatgaggttgcgtacctgagactgtga
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