Cololabis saira (Pacific saury): 133440930
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Entry
133440930 CDS
T09849
Symbol
irx1a
Name
(RefSeq) iroquois-class homeodomain protein IRX-1a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133440930 (irx1a)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
133440930 (irx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
CENP-Q
Motif
Other DBs
NCBI-GeneID:
133440930
NCBI-ProteinID:
XP_061574257
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Position
3:complement(18755970..18760925)
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AA seq
489 aa
AA seq
DB search
MSFPQLGYPQYLGASPAVYGGDRAGVLTSSRGGSSELGGSPSAAAAAVSSVLGMYANPYA
HNYSAFLPYTSADLALFSQMGSQYELKESPGVHPASFAAHTSPAFYPYGQFQYGDPARPK
NATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVT
WGSRSKEDGEEDGHLFGSGDEAEKNEDEEEIDLESIDIDKIDDNDGDQSNEEDDDKSTEG
SREQLRGDLDSLEKRRAFALQAHEALEKSKSALSAHSGGKENSEHGNNNNTTRVLSPDRP
GSFPLPSANKPKIWSLAETATSPDSSSQKAASPPSHPAGPHHHQIQAHPAFLPSHGLYTC
QIGKFHNWTNGAFLGQNSLLNVRSFLGVNQHHHHHHHQQQQQQQQQQQAVSVSPVGASTA
LSNDSKVPAETHSPKHIEHENSVRSDSPQTQTQTLKSSFRPIHDRSSLPSSARSPQDATQ
RVLTALSSA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccacagttaggctacccgcagtacctcggtgcgtccccggcggtgtacggg
ggcgaccgggcgggagtgctgacctcgtcccggggagggagctccgagctcgggggaagc
ccgtccgccgccgcggcggccgtctcctccgtgctgggcatgtacgccaacccgtacgca
cacaactacagcgctttcttaccttacaccagcgcggacttggctctattctcacaaatg
ggatcccagtatgagctgaaggagagtcccggcgtgcatcctgccagctttgcggcccac
acgtcccccgccttctacccgtacggccagttccagtacggggacccggcccggcccaag
aacgccacccgggagagcaccagcaccctgaaggcctggctcaacgagcacaggaagaac
ccgtaccccaccaagggcgagaagatcatgctggccatcatcaccaagatgaccctcacg
caggtctccacctggttcgccaacgccaggaggaggctgaagaaggagaacaaggtgacc
tggggcagcaggagtaaagaagacggcgaggaggacggacacctgttcggcagcggggac
gaggcggagaaaaacgaagacgaggaggagatcgacttggagagcatagacatagacaaa
atcgacgacaacgacggggatcagagcaacgaggaggacgacgataagtcgacggagggc
agcagggagcagctccggggagacctggacagcctggagaagcggcgggccttcgccctg
caggcccacgaggccctggagaaatctaagagcgcactttcagcacactcgggcggcaag
gagaactcggaacacggaaacaacaacaacaccacgagggttttatccccggacagaccc
gggagctttcctctcccgtccgccaataaacccaaaatatggtcgttggcggagacggcc
actagtcccgacagttcctctcagaaggccgcgtcccccccctcgcacccggcggggccg
caccaccaccagatccaggcccacccggctttcctgcccagtcacggactgtacacttgc
cagattgggaagttccacaactggacgaatggggctttcctgggccagaactccctgctg
aatgtgaggtcgtttctgggagtaaatcagcaccatcatcaccaccatcaccagcagcaa
cagcagcagcagcagcagcagcaggcggtgtcggtgtcaccggtaggagcttcaacagcg
ctcagcaacgacagcaaagtcccagcagagacacacagtcccaagcacatagagcatgaa
aacagcgtaagatcggattcacctcaaacacagacacagaccctgaagtcttcctttcga
cccattcacgacagatcctctctgccttccagcgccaggagtccacaagacgccacgcaa
cgggtcctcactgcactctcctcggcttga
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