Cololabis saira (Pacific saury): 133440931
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Entry
133440931 CDS
T09849
Symbol
irx2a
Name
(RefSeq) iroquois-class homeodomain protein IRX-2a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133440931 (irx2a)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
133440931 (irx2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
133440931
NCBI-ProteinID:
XP_061574258
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Position
3:18931536..18937037
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AA seq
475 aa
AA seq
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MSYPQGYLYQPPGSLALYSCPGYGSALAAPRSDDLARPSSGSAFSPYPGSAGAGPGFSSP
LSYSTDPATGFPSYMSSPYDAHSTGMAGLSYHPYGSPGYPYQLNDPAYRKNATRDATATL
KAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRNKSEDE
DEDDTDAERKEVERCADKNLDTSEASAEDEGISLHVDTLTDHSCSAESDGEKVSCARKLS
SDLPEDKCEDEDEDEQNNRERRVQLSAKPATSSPLTGVEAPLLGHHHHHHLHHFQQREDA
ARGVAHSNHLSTNKVSSSGPPQNPAIKPKLWSLVEIATSDLKEQHQGQSGPSCPSSSSPS
LYQTPSILGRPIYYTSPFYSNYTNYGNFSPLQGQGILRYTNSSGVSLAAAAAAAAAAAAA
NEEASGINPKPGPQSPKPGPEPPLAKNNPNHIVVVDQQQQQQHFRPANLEAKKGT
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcctcagggttacctttaccagcccccgggctctctggctctgtattcgtgc
ccgggttacggctcggctctggccgctccgcggagcgacgacttggctcggccgtcctcc
ggctcagccttcagcccgtaccccggctctgccggcgccgggccgggcttctccagcccg
ctgtcatactccaccgacccggccacgggattcccatcctacatgtcctctccatacgac
gcgcacagcacgggcatggccgggctgagctaccacccgtacgggagtccgggttacccg
taccagctcaacgaccccgcgtaccgcaagaacgccacccgggacgccacggccaccctg
aaggcctggctgcaggagcacaggaagaacccgtaccccaccaagggcgagaagatcatg
ctggccatcatcaccaagatgaccctcacgcaggtctccacctggttcgccaacgccagg
aggaggctgaagaaggagaacaagatgacctgggcgcccaggaataagagcgaggacgag
gacgaagacgacacggacgcggagaggaaggaggtggagcgctgcgcagacaaaaacctg
gataccagcgaggcttctgcagaggacgaaggcatcagcttgcatgtggacacactgaca
gatcactcctgctcggcggagtcggacggggaaaaggtgagctgcgcgcgcaagctgagc
tcggacctcccggaggacaagtgcgaggacgaggacgaagacgagcagaataaccgcgag
cggcgggtgcagctctccgccaaacccgccacgtcgtcccctctcacgggagtggaggct
ccgctgctcggccatcaccaccatcaccacctccatcacttccagcagcgcgaggacgcc
gcccgcggcgtcgcccatagcaaccacctcagcaccaataaggtgtcctcctccgggccg
cctcagaaccccgcaatcaagcccaaactgtggtctctggtggagatcgctacctcggac
ctaaaggagcagcatcagggccagtccgggcccagctgcccctcctccagctccccctcc
ctctaccagaccccctccatcctgggaagacctatttattacacttctcccttttatagt
aattacacaaactatggcaacttcagccccctgcagggtcaagggatcctgcggtacacg
aattcatctggagtgagtctggcagcagccgcagccgccgccgctgctgctgctgctgca
aacgaggaggccagcggcattaaccccaaacccgggccacaatcccccaaacccggccca
gaaccccccctcgctaagaataaccccaaccacattgttgttgtcgaccagcagcagcaa
cagcagcatttcagacccgcaaatttagaagcgaagaaaggtacgtaa
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