Cololabis saira (Pacific saury): 133440932
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Entry
133440932 CDS
T09849
Symbol
irx4a
Name
(RefSeq) iroquois-class homeodomain protein IRX-4a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133440932 (irx4a)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
133440932 (irx4a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
133440932
NCBI-ProteinID:
XP_061574260
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Position
3:19130174..19136600
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AA seq
466 aa
AA seq
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MSYPQFGYPYSSAPQFLMTSNSLTTCCESSGRSIADSGVAASGQTPVYCPVYESRLLATA
RHELSSAAALGVYGGHYTGGQGYGNYVTYGTDASAFYSLGTFDAKDATASAHAGITQAAA
YYPYDPTLGQYQYDRYGSMDGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAII
TKMTLTQVSTWFANARRRLKKENKMTWPPRNKGSEEKRYDDDEDGSQEEQIKSENNEDET
RSRADKDLQLSDLDDFDPLESENSECELKHRYHMNTHMSTTTADCPPDHLIKNASLKLSI
PVSLGGEQDLSKSCLKTSSEDYQAVDSRQQQEHEQGHQILDGKPRIWSLAQTATSLSQTD
YPSCMLRCPPAPAPQPASLSPVTGPDNGQDSPVTTLRNWVDGVFHDPLFRHSTLSQALTN
TTVSWSASSKQLLEAERSVALQQQLHDSSKDSPMTFPKTINKLFCS
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatccacaatttggatatccatactcgtctgctccacaattcctaatgaccagc
aactctctgaccacttgctgcgagtcctcgggcagatccatagcggactccggcgtagcg
gcgtccggccagacccccgtgtactgtcccgtgtacgagagccggctgctggccacggcc
cggcacgagctgagctcggccgccgcgctgggcgtgtacggcggccactacaccggcgga
cagggctacgggaactacgttacatacggcacggacgcgtccgctttctactcgctggga
acatttgatgctaaagatgccacagcttctgcgcatgcgggaataacccaggcagctgcc
tattacccttatgatcctaccttgggacagtatcagtacgacagatatggctccatggat
ggggggacaaggcgtaagaatgccacccgcgaaacaaccagcaccctgaaggcctggctg
caggagcacaggaagaacccgtacccgaccaaaggggagaagatcatgctggccatcatc
accaaaatgacgctgacgcaggtctccacctggttcgccaacgccaggaggaggctcaag
aaggagaacaagatgacgtggccgcccagaaacaagggctcagaggaaaaacgatatgac
gatgatgaggatgggtctcaggaggagcagataaaaagcgaaaataatgaggatgagacc
agaagtcgagctgataaggacctacagctgagcgatttggatgatttcgacccgctggag
tcggaaaactccgagtgcgagctgaagcaccggtaccacatgaacacgcacatgtcgacg
accacagccgactgcccgcccgaccacctcatcaagaacgcctctctaaaactctccatc
cccgtgtctctcggaggggagcaggacttgagcaaaagctgtctcaaaacgagctcggag
gattaccaggcggtggacagcagacagcagcaggaacatgaacaaggccaccagattcta
gacggcaagccccggatctggtctctggcgcagacggcgacctcgctgagccagacggac
tacccgtcctgcatgctgcgctgcccgccggccccggcccctcagccggcctccctcagc
ccggtcaccggcccggacaacggccaggactctcccgtcaccacgctgaggaactgggtg
gacggggttttccacgaccctttgttcagacacagcactttgagccaggctctgaccaac
accaccgtctcctggagcgccagcagcaaacagctgctggaggcggagaggagcgtggcg
ctgcagcagcagctccatgactccagcaaagacagtcccatgactttccccaaaactatc
aacaaactcttctgctcctaa
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