Cololabis saira (Pacific saury): 133440983
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Entry
133440983 CDS
T09849
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1-like
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133440983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133440983
Enzymes [BR:
csai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133440983
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133440983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
Baculo_IE-1
DUF5711
DUF6383
Motif
Other DBs
NCBI-GeneID:
133440983
NCBI-ProteinID:
XP_061574324
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All DBs
Position
3:complement(23966037..23967681)
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AA seq
420 aa
AA seq
DB search
MDVDENPPEALHPTCCLASEGTLREIEVNLLECKVCFEMFDSQQKLRRPQNLCCGHVLCQ
ECITALAHPLLRKLECPFCRQLCSVDGTSQCQVLCDLQELMLPRSPSSSASPPCAKKIDG
CLASNVKLTATLQLSCAFGGWGTLINPTGIAALGSSGTLVVVHDGEKRIVVFNQQGRKLN
SFGRRGKASSRICYPMDVAVAPNGYVVVTDAGDKAVKVFSSRGNHVLTVKDIFQLPWGVD
TDSCGSILVSDDRAGTLSLVKVDYGLGMIAHHQTAISDLHCPRAVACCQVTGNTAVMEHP
ADVAHPTERHQYTRLKVFTKDFHLIYQTDSFSLNLQSTVRLSMSAVVFDGDGDVIVTDSN
QGLVCSLGKLQNGPIITPLVGNHLIRPVGLVLLNNMLIALDAGDHTVKIYSSKQDTSPTS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggacgagaatcctcctgaggcccttcaccccacctgctgcctggcttccgag
gggacgttgagagagattgaggtcaacttgctggagtgtaaagtctgctttgaaatgttt
gattctcaacagaagctgcggaggccgcagaacctgtgctgtggccatgtgctgtgtcag
gagtgcatcacggccctggcccaccctctcctcaggaagctggagtgtccattctgcaga
cagctgtgcagcgttgatgggacctcccagtgccaggtgctctgtgacctgcaggagctg
atgttgccccggagcccctcatcctctgcctctcctccctgtgcaaaaaaaattgacggt
tgcttagcctcaaacgtgaaattaaccgccaccctgcaactcagctgtgcatttggtggc
tggggtactctcatcaaccctactgggattgctgctttgggatcttctgggactttagtt
gtggtgcacgatggggagaagaggattgtggttttcaaccaacaaggaaggaagctgaac
agctttgggcgaagaggaaaagccagtagcaggatttgctacccaatggatgtagcagtg
gctcccaatggttatgtggtggtgacggatgcgggggataaagccgtgaaggttttctcc
tccagggggaatcacgtgttaacggtgaaagacatcttccagctaccctggggggtggat
acagacagctgtgggagcatcctggtctcggatgatcgggctggtacactgtccctggta
aaagtggactatggtcttggcatgattgcgcatcatcaaacagccatctcagacctgcat
tgtcccagagcagtggcctgctgtcaggtaactggaaacactgcagtgatggagcacccc
gctgatgttgcacatccaacagagagacaccaatacacgagactgaaagtgtttacaaaa
gacttccatctcatctaccagacggacagctttagcctgaacctgcagtccacagtgagg
ctcagcatgtcggctgtggtttttgacggagacggagatgtgattgtgactgactccaat
caggggttggtttgtagtttggggaagctccagaatggtccaattataactcctcttgtg
gggaaccatctcatccgaccagttggactggttttactgaacaacatgctcatcgccctg
gatgctggtgaccatacggtgaagatttattcttctaaacaagataccagccctacaagt
tag
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integrated database retrieval system
