Cololabis saira (Pacific saury): 133441031
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Entry
133441031 CDS
T09849
Symbol
fdps
Name
(RefSeq) farnesyl pyrophosphate synthase isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai00900
Terpenoid backbone biosynthesis
csai01100
Metabolic pathways
Module
csai_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
133441031 (fdps)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
csai01006
]
133441031 (fdps)
Enzymes [BR:
csai01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
133441031 (fdps)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
133441031 (fdps)
Prenyltransferases [BR:
csai01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
133441031 (fdps)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Pfc11_Rna14-15-ID
Terpene_synth_C
Motif
Other DBs
NCBI-GeneID:
133441031
NCBI-ProteinID:
XP_061574388
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All DBs
Position
3:26830489..26838334
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AA seq
392 aa
AA seq
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MRRLLLSFAVKSPRNTLSLCPLRVRSHGLKLCTSSFQGDSNGTESKKALLSDHKLFESKF
DDLVRELTEKDFRDPVLADALGRLRENMLYNVPGGKKNRGLSVIGSLREFLPPSQLSQDL
VQRALLVGWCIELLQAFFLVADDIMDSSVTRRGQPCWYKKDGISLDAINDSCLLESTIYR
LLRRHCRDQLYYVHLLELFHETTFQTELGQTLDLVTAPPGQIDLSRFSMERYKAIVKYKT
AFYSFYLPVASAMYMAGINSEEEHNNAKLILLEMGEFFQIQDDYLDCYGDPAVTGKIGTD
IQDNKCSWLVVKALEVMTPEQRSELEACYGRKDESSVEKVKALYKTLQMPTLYQKYEEES
YQRLQKLIAHHAQNLPTSVFLNFANKIYKRDK
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgagacgcctgctgctaagctttgccgtcaaatcccccagaaacacactgagcctgtgt
cccctgagagtaagaagtcatgggctgaagctgtgcacctcgtcctttcagggggacagc
aacgggacggaaagcaagaaagccttgctgtcagaccacaagctgttcgagagcaagttt
gatgatctggtgagggagctgacggagaaggacttcagagacccggtgctggctgatgcc
ctgggccggctgagagagaatatgctctacaacgtacctggtggcaagaagaaccgaggt
ctgtctgtgattggctccctgcgggagtttctgcccccctcgcagctcagccaggacctg
gtgcagcgggctctgctggtgggctggtgcatcgagctgcttcaagcatttttcctcgtg
gcagatgacattatggatagctcagtgactcggagaggacagccatgctggtacaagaag
gacggaataagcttggatgccatcaacgattcatgtcttctggaatccacaatctacaga
ctactgcgaagacactgcagagatcaactctactatgtccacttactggagcttttccat
gagaccactttccagacagagcttggccagactctggacctcgtgaccgctccacctggt
cagatcgacctcagcagattcagcatggaaagatataaagctattgtaaaatacaagacg
gcattttactcgttctacctaccggtggcatctgcaatgtacatggcaggaatcaatagt
gaagaggagcacaataacgccaaactcatcttacttgagatgggggagttcttccaaata
caggatgattacttggactgttacggtgaccctgctgtgactggaaagattggtacagac
atccaagataacaaatgcagctggctggtggtgaaagctctggaagtcatgactccagaa
cagagatcagagctggaggcttgttacgggcgcaaggatgaatccagtgtggaaaaggtc
aaagccctgtacaaaaccctgcaaatgccaactctctaccagaaatatgaggaagagagc
taccagcggctgcagaaactcatcgctcatcacgctcagaaccttcctacctcagttttc
ctcaattttgccaacaaaatctacaagagggacaagtga
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