Cololabis saira (Pacific saury): 133441033
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Entry
133441033 CDS
T09849
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133441033 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csai03041
]
133441033 (prpf3)
Spliceosome [BR:
csai03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
133441033 (prpf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
DUF2729
TPX2
Motif
Other DBs
NCBI-GeneID:
133441033
NCBI-ProteinID:
XP_061574391
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All DBs
Position
3:27056825..27072152
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AA seq
699 aa
AA seq
DB search
MSLPKREVEELRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKRKTTDQLRPFLDDSAG
GFVERLFEALEESRGSRGSKGGSEKNRKRELKDVFGDEADKGAVREKPEAGDVTTVKRKR
THRFEEVEEPEVIPGPPSESPGMLTKLQIKQMMEAATKQIEERKKQLSFGSSATSQLDTP
PLSRLLSAHGVSAAGASSLAPSQAASFMNDAIEKARKAAELQARIQSQLAMKPGILGPLG
NTGAHNLVALANLHAMGIAPPKVEIKEVNKPTPLILDDKGRTVDASGKEVELTHRMPTLK
ANIRAVKREQFRQQLKEKPSEDLESTSYFDQRVLITPSQRPRRSFKFHEQGRFEKIAQRV
RTKAQLERLQNEIAQAAKKTGIQASTKLALIAPKKEIGEGEVPYIEWWDSYILPSHTPIN
KDTKFGELDLFGVTNLVEHPAQMSPPVDTDKPVTLGVYLTKKEQKKLRRQTRREAQKEVQ
EKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLT
AEQRKDKKVKKLREDLTNGVHIAVYRIRNLQNPAKKFKVEANANQLYLTGTVVLHKDVNI
VVVEGGPKSQKKFKKLMMHRIKWVEHNSKRDDPDGDDDTKRNNKCWLIWEGTAKERSYGE
MKFKQCPTENMAREHFKKHGTEHYWDLALSQSVLDGTDD
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttcccaagcgggaggtggaggagttgagaccatgggtggagcgaacagtgaag
aaagtgctgggtttctctgagcccactgtggtcaccgctgctttacactgtgtggggaaa
ggcctggataaacgcaagaccacagaccagctgcgccctttccttgatgactctgctgga
ggtttcgtggagcggctttttgaagctcttgaggagagccgaggttcccgtggcagcaaa
ggaggaagtgaaaaaaaccgcaagagagaacttaaggatgtatttggagatgaggctgac
aaaggtgcagttcgtgagaagcccgaggcaggagatgtgacaacagtaaagcggaaacga
acccatcgctttgaggaggtggaggagcccgaggtcattcccgggccgccatctgaaagc
cctggcatgcttacaaaactgcagatcaaacagatgatggaagctgccacaaaacaaatc
gaagaaaggaagaaacaactaagctttggctcttctgcaacgtcacagctagacacccct
ccactgtcacggcttctcagtgctcatggagtttcagctgctggtgcctcatctcttgcc
ccctctcaggctgccagctttatgaatgatgcaattgagaaggcccgcaaggctgctgag
ctacaggcccgcatccaatcccagttagccatgaagcctggcatcctcgggcctttgggg
aacactggggctcacaacctagtcgcacttgctaatctgcatgccatgggaattgctcca
ccgaaagtagaaattaaagaggtgaacaaaccaacgcctcttattttggacgataaggga
agaactgtagatgccagtggaaaagaggtggaactcacacaccgtatgcccactctcaaa
gcgaacatacgagcggtaaagagggagcagttccgccagcagttgaaggagaagcctagt
gaggacttggagtccacgtcctactttgaccagcgtgttcttatcacaccatctcagcgt
cctcgcaggagctttaaattccatgagcaggggcgttttgagaaaattgctcagagagtt
agaactaaggcccaacttgaacgactgcaaaatgagattgcccaggcagcgaagaaaaca
ggaatccaggcatctaccaagctggctctgattgctcctaaaaaagagattggagaaggg
gaagtgccctatattgagtggtgggactcgtacatcttgccctcccacacacccataaat
aaagacacaaaatttggagaattggatttgtttggtgtgaccaacctggtagagcatcct
gcacagatgagtcctcccgttgacacagacaagccagtaacgctgggcgtatacttgaca
aagaaggaacagaagaaattgagaagacaaacgcggagagaggcacaaaaagaagtgcaa
gaaaaggtccgtctgggacttatgcctccaccagaacccaaagtacgcatctccaacctg
atgagagtgttgggaacagaggccgttcaggaccccacaaaagttgaagcccatgtgaga
gcacagatggccaaaagacaaaaagctcatgaggaggccaacgcagcgcggaagctcaca
gcagagcaaagaaaagataagaaggtcaagaagttaagagaagacctgactaacggtgtt
catattgcagtatataggatccgtaacctccaaaatccagcaaagaagtttaaagtggaa
gccaatgccaaccagctgtacctgacaggcacagtagttctgcacaaagatgtcaacatt
gttgtggtggaaggaggccctaaatcccagaaaaagttcaaaaagctgatgatgcacagg
atcaagtgggtggaacacaacagtaaaagagacgatccagatggtgatgatgacacaaag
agaaacaacaagtgttggttgatttgggagggcacagctaaagagcgtagttatggagag
atgaagttcaagcagtgccccacagagaacatggctagagaacacttcaagaagcatggc
acagaacactactgggacctggcccttagccagagcgtgttggacggcacggatgactga
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