Cololabis saira (Pacific saury): 133441038
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Entry
133441038 CDS
T09849
Symbol
prpf31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133441038 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csai03041
]
133441038 (prpf31)
Spliceosome [BR:
csai03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
133441038 (prpf31)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
133441038
NCBI-ProteinID:
XP_061574395
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All DBs
Position
3:complement(27596439..27603486)
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AA seq
507 aa
AA seq
DB search
MSLADELLADLEEAGDEGEDDLYPDGEEGESDGEATQGRMDRGLEDIPEEMEVDYSKAES
VASIAKLRNSKQFSEITDKIALYIGKQRKNSDVSGPVESDPEYRLIVAANNLTVEIDNEL
NIIHKFTRDKYSKRFPELESLVPDSLDYIRTVKELGNNLEKCKNNETLQQILTNATIMVV
SVTASTTQGTLLNEEELKQLEDACDMALELNTSKHKIYEYVESRMSFIAPNLSIIVGAST
AAKIMGIAGGLTNLSKMPACNLMLLGAQRRTLSGFSSTSLLPHTGFIYHCDVVQSLPPDL
RRKAARLVSAKCTLASRVDSFHESSDGKVGYDLKEEIERKFDKWQEPPPVKTVKPLPAPL
DGQRKKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRV
RQAQVNEATKARISKSLQRTLQKQSMSFGGKSTVRDRSSGTSSSVAFTPLQGLEIVNPQA
AEKKVAEANQKYFSNMAEFVKVKKETK
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggcggatgagctcctggctgacttggaggaggctggagatgagggggaggat
gatctgtatccagacggagaggagggagagagtgatggagaagcaactcagggaaggatg
gatagaggcctggaagacattccagaggagatggaggtggattacagtaaagctgagagt
gttgcatccattgccaaactccgcaatagcaaacagttttcagaaatcacagacaaaatt
gcattatatataggaaagcaacgcaagaattcagatgtctcaggcccagtcgagtccgac
ccagaatacaggctgattgtagcggccaataacctcacggtggagatcgacaatgagctc
aatatcattcacaagtttacgagggacaaatactccaagaggttcccagagctcgagtca
ctggtgccagattccttagattatatccgcacagttaaggaattgggaaacaatctggag
aaatgtaaaaacaatgaaacgctgcagcaaatcctgaccaatgccactattatggtcgtc
agtgttacagcatcaactacacaagggacattgctaaatgaggaggaactgaagcagctt
gaggatgcctgtgacatggccctggagctgaacacgtctaaacacaagatttatgaatat
gtagaatccaggatgtccttcatagccccgaacctgtccatcatagtcggagcatcaact
gctgcaaagatcatgggtattgctggtggcctcactaacctctcaaagatgccagcctgt
aatctgatgctgctgggagctcaaaggagaaccctctctggcttcagcagcacctcccta
cttccccacactggcttcatctaccactgtgatgttgttcagtcattgccacctgatctc
aggaggaaggcagctcgtctggtatcggctaaatgcactctggcatctcgagtggacagt
ttccatgagagttcagatggaaaggttggctatgacctaaaggaagagatagaaaggaag
tttgataaatggcaggagccgccgcctgtgaagacggtcaagcctctgccagccccacta
gatggacagaggaagaagagaggaggaaggagataccgaaagatgaaggagcgtctgggg
ctgacggagatcaggaaacatgccaacagaatgacctttgcagagattgaagatgacgcc
tatcaagaggatctgggcttcagtctgggtcagctggggaagagcggcagtgggagagtc
aggcaggctcaggtcaacgaggccaccaaggccaggatctccaaatcccttcagaggaca
ttgcagaagcagagcatgtcatttggaggaaagtccacagtcagagatcgctcctccgga
accagctccagtgtagccttcactcctctccagggactggagatagttaacccgcaggct
gcagagaagaaggtggctgaagccaaccagaaatatttctctaatatggcagagttcgtt
aaagtcaagaaggagaccaagtga
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