Cololabis saira (Pacific saury): 133441417 Help Entry 133441417         CDS       T09849                                  Symbol brip1 Name (RefSeq) Fanconi anemia group J protein   KO K15362   fanconi anemia group J protein [EC:5.6.2.3] Organism csai  Cololabis saira (Pacific saury) Pathway csai03440   Homologous recombination csai03460   Fanconi anemia pathway Brite KEGG Orthology (KO) [BR:csai00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     133441417 (brip1)    03460 Fanconi anemia pathway     133441417 (brip1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:csai03400]     133441417 (brip1) Enzymes [BR:csai01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      133441417 (brip1) DNA repair and recombination proteins [BR:csai03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     BRCA1-B complex      133441417 (brip1)    FA (Fanconi anemia) pathway     Downstream FA components      133441417 (brip1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Helicase_C_2 DEAD_2 DEAD HBB Motif Other DBs NCBI-GeneID:  133441417 NCBI-ProteinID:  XP_061574680 LinkDB All DBs Position 4:complement(5480448..5581459) Genome browser AA seq 1242 aa AA seqDB search MAAPPVEYTIGGVRITFPCKAYPSQLAMMNSIVRGLNYGQHCLLESPTGSGKSLALLCSA LGWQRAQAAKLHEGGGFMEEKSQPAKVSGDCKAAGSPAPCCCVCHNQPSSARGPAAAQPA VVDLTVSPCNGTTRPPARAPEHLPLAEESPAQRRSLSSRLSEKVQACLSSDCQEEDDFQP DRKRLRSAEYQSHKRQRPQKGVIFIDDEDELDVEPSVPPSWIPAMNSQKAGLSSSYCVPE PCSRCPCAAAKDTGKDKDKDGRKKIPKIFFGTRTHKQITQVAHELKRTVYSGVHMTILSS RDHTCVHPEVAPHSNRNERCKELLEAKDGKSCRFYHGVQRMNDQHVLQRVHGLHQAWDIE DLVALGKRIRACSYYAARELMQGAAIIFCPYNYLLDPMIRESMEIDLAGQILVLDEAHNI EDCARESASYTVDQKNLQTSREELDSMVNNNIRRSQHEPLRDFCYTLINWIQDSQDCLSE RGYECSSKVWSGKEILGIFHGLGITVDTFSILKQCLAAVLEKEERVGLVNGKEDMVQVPV ISSSTSSVLKNLFMVLDFHYRDNCRFAEDYRVALQRSFAWTNQVPPDIPDAKGFFVRPRA RQRQSHRVKTEVVTLSFWCLNPAVAFSDLSGLVHSIVLTSGTLSPMGSFSSELGVKFTIQ LEANHVIKKSQVWVGTVGDGPQGRKLCATFQHAETFAFQDEVGALLLHVCQVMAKGVLCF LPSYKMLDKLRDRWTTTGLWEKLEQKKTVITEPRGGGKGDFDELLQMYYDAIKYCVDRDG ALLIAVCRGKVSEGLDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDQHCKSRGLLPGS RWYEIQAYRALNQALGRCIRHRNDWGALILVDDRYRNNPNRYITGLSKWVRQLVQHHNTF SNAMHSLEAFSQVQNKVEVAPAGSQILSPTDSPTTNQLSGAVKASEPQIPEPHQDTSPSI LPSSSCTHLKATHNEKAGPLAMLQSPPAGHLPPQPPMHISTFISSNFKKPIFNVKPPGDS SRPESRQTSFLPLKPEAFGLKQGPGKSSSETSAESTNLVPEPATATDPPTCDDGTPVENT CDEDDEDQTVFFTPELFEEDGGEGSPQKETNPVSPSKTSLESPALVSGELLGSQQVPGLA SFSGGQILVRKEGDERLQGQGEASGGEKAEASGGEKGEASGGEKGEASGGEKGEASGGEK GEASGGEKAEELRTQTGRRPSRLSRSRQTLSSTQTGNYQPEL NT seq 3729 nt NT seq  +upstreamnt  +downstreamnt atggcagcccccccggtggagtacaccatcggaggagtgaggatcaccttcccctgcaag gcgtacccgtcccagctggccatgatgaactctatcgtccgggggttgaactacgggcag cactgtttgctggagagtcccacgggcagtgggaagagcctggccttgctgtgctctgct ctgggctggcaacgcgctcaggctgctaaacttcatgaaggaggcggtttcatggaggag aagagtcagcctgctaaagtttccggggactgtaaggcggcgggttcccccgccccgtgt tgctgtgtgtgccacaaccaacccagcagcgcccgaggtccagctgcagcccagcctgct gtcgtggacctcacggtgtccccctgcaacggaacgacccggccgccggcccgagcacca gaacacctgcctttagcagaggagtctccagcccagaggagatctctgtcctcccgtttg tctgagaaggtccaggcttgtctcagctccgactgccaggaagaagacgactttcagcca gacaggaaacgtcttcgcagtgcagagtaccagagccacaagaggcagcgtccacagaaa ggagtcattttcatagacgatgaagacgagctggacgtagaaccttcggttcctccgagc tggatcccagctatgaacagccagaaggccggtctgtcctcatcatactgcgtgcctgag ccctgctcccgctgcccctgcgctgcagccaaggacactgggaaggacaaagacaaagat ggcagaaagaagattcccaagattttcttcggcacacgcactcataaacaaataactcag gttgcacacgagctgaagcgcaccgtttactccggcgtgcacatgaccatcctgtccagc agggatcacacctgtgtccaccccgaagtggcgcctcactccaaccgcaacgagcgatgc aaagagcttctggaggccaaagacggcaagtcgtgccggttctaccatggcgtccagagg atgaacgaccagcacgtcctgcagcgggtccacgggctgcaccaggcctgggacatcgag gacctggtggccctgggcaagcgcatccgcgcatgctcttactacgctgcccgggaactc atgcagggggctgccatcatattctgcccctacaactacctgctggacccaatgatcaga gagagcatggagatcgacctggcgggccagatcctggtgctggacgaggcccacaacatc gaggactgtgccagggaaagtgccagttacacggtagaccagaagaatctgcagacgtcc agggaggagctggacagcatggtcaacaacaacatcagacgctcccagcacgaacctctc agggacttctgctacaccctgatcaactggatccaggacagccaggactgcttatctgaa cgtggctacgagtgttccagtaaggtctggagcgggaaggagatactgggcatctttcat ggtctgggcattactgtggacaccttctccattctgaagcaatgcttagcagcagttctg gagaaggaagagcgtgttggtttggtcaatgggaaggaggacatggtgcaggtcccagtc atcagctcgtctacatcctccgtcctcaaaaacctcttcatggtgctggacttccactac agggacaactgccggtttgctgaggactaccgggtagctctgcagaggagcttcgcttgg accaatcaagtcccgcctgacattcctgacgccaaaggcttctttgtccgtccacgtgct cgacagcgccagagccaccgagtcaagacagaagttgtgaccctgagcttctggtgcctc aaccctgccgtggccttttctgacctgagtgggttagttcacagcatcgtgctgacatca ggaaccctgtcacccatgggctcgttctcctctgaacttggagtgaaattcaccatccag ttggaggccaaccatgtgatcaaaaaatcccaggtttgggtgggcacagttggtgacgga ccccagggcaggaagctgtgtgccacctttcagcacgctgaaacgttcgccttccaggat gaagtgggtgccctgctcctccacgtgtgccaggtcatggccaagggcgtgctgtgcttc ctgccctcatacaagatgctggacaagctgagagaccgatggaccaccactggtctgtgg gaaaaactagaacaaaagaaaactgtgatcacagaaccccgaggtggcgggaagggggat tttgacgagcttcttcagatgtattatgatgccatcaagtactgcgtggacagagatggt gcgctgctcatagctgtttgcagaggaaaggtcagcgaggggctggacttcaccgatgac aacgccagggcagtggtcaccatcggaattcccttccccaacatcaaagacctgcaggtg gaactgaaaatgaagtacaatgatcagcactgcaagtccagaggtcttctcccagggagt cgctggtatgagattcaggcctaccgagctctgaaccaggccctgggaaggtgtatccgc cacaggaatgactggggtgccttgatccttgtggacgaccggtacaggaataatcctaat cggtacatcacaggcttgtctaaatgggtccgtcagctcgtccagcatcacaacaccttc agcaatgcaatgcattccctggaagcgttctctcaggtccagaacaaggtggaagtggca cctgcaggtagtcagatcctcagccctactgattcacctaccaccaatcagctgtcagga gctgttaaggcctctgaaccccagatacctgaaccccaccaggacacgagtccctccatt ctaccttcttcctcctgcacacacctgaaagctacacacaatgagaaagcaggaccgttg gcgatgctgcagagccccccagcaggccatctgcctccgcagcctcccatgcacatctcc accttcataagctccaactttaaaaagccaatcttcaacgtaaaacccccgggtgattcc agccggcctgagagccgccagacttcctttttgccgttaaagccagaggcctttggcctt aaacaagggcctggaaaaagttccagtgaaaccagtgcagaatccactaatctggttccc gagccagccacagcaacagatcctcccacgtgtgacgacggaacacccgtggaaaacact tgcgatgaagacgatgaggaccagactgtgttttttactcctgaactgtttgaggaggac ggaggggagggtagccctcagaaagagacaaatcctgtgtcaccgtccaagacatcttta gagagcccagccctggtatcgggagaactgttaggctcacaacaagtcccggggttggcc tccttttctggtggacagattttagtcaggaaggagggcgatgagcggcttcagggacag ggagaggccagcggaggagagaaggcagaggccagcggaggagagaagggagaggccagc ggaggagagaagggagaggccagcggaggagagaagggagaggccagcggaggagagaag ggagaggccagcggaggagagaaggcagaggagcttagaacccagacaggcaggagacct agcagactatccaggtccaggcagacgctctcctccactcagacaggtaactaccagcca gaactctga

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