Cololabis saira (Pacific saury): 133441460
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Entry
133441460 CDS
T09849
Symbol
farsb
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
133441460 (farsb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csai01007
]
133441460 (farsb)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csai03016
]
133441460 (farsb)
Enzymes [BR:
csai01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
133441460 (farsb)
Amino acid related enzymes [BR:
csai01007
]
Aminoacyl-tRNA synthetase
Class II (U)
133441460 (farsb)
Transfer RNA biogenesis [BR:
csai03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
133441460 (farsb)
Prokaryotic type
133441460 (farsb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
EF1_GNE
B5
B3_4
EF-1_beta_acid
Arc1p_N_like
EAD7
Motif
Other DBs
NCBI-GeneID:
133441460
NCBI-ProteinID:
XP_061574753
LinkDB
All DBs
Position
4:complement(9274173..9299252)
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AA seq
842 aa
AA seq
DB search
MPTVGVKRDLLFEALGKTYTDEEFDELCFEFGLELDEITSEKDIISREQGDSKASGASDV
ILYKIDVPANRYDLLCLEGLVRGLQVFKNRVEAPRYTRVSPVGGETQRLIITKETAAVRP
HAVAAVLRNITFTQERYDSFIELQEKLHQNICRKRSLVAIGTHDLDTISGPFTYTAKPPG
DISFTPLNQTKEYTAAQLMDLYKTDSHLRHYLHIIEDKPRYPVIYDSNGIVLSMPPIING
DHSKITLQTKNVFIECTAMDLTKAKIVLDMMVTMFSEYCSQPFTVEEAEVVFPDGKTCIY
PELAYRKEKLSRDFINRKVGINESTERIAQLLTRMCLRSTAAGDDIEVEIPPTRSDVIHA
CDIMEDAAIAYGFNNITRTTPRTYTVANQFPLNKLTELLRQDMAAAGFTEALNFALCSQE
DIAEKLGKKISEIKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDVV
LKDETKDVGARNRRHFCAIYYNKSPGFEVIHGLLDRTMQLLEVKPVRGEGYHIQAAEDPT
FFPGRCAEILVRGKSVGRLGVLHPDVINRFELTLPCSALEMDIEPFLGHTAETVLTHDVP
MQETVQHKFCTQGEPHRPLSTKTVFGDMSTQEGLKALDHFLADKSYMEGFTASQADVLMF
DAVPAPPSQTFCHLWRWHSHIKSFQTERAHLPLAGNQFVLPPANPSASTNPTSDDDDIDL
FGSDDEAESAEAARIKEQRLAEYASRKSKKPAVVAKSSILLDVKPWDDETDMARLEQCVR
SVSMDGLLWGRAKLVPVGYGIHKLQIGCVVEDEKVGTDMLEEAITAFEEYVQSVDVAAFN
KV
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcggagtaaagagagatcttctctttgaagcgctgggaaaaacttacact
gatgaagagtttgacgagctgtgctttgagttcgggttggagctggatgaaattacgtcg
gagaaggacatcatcagcagagagcagggcgactccaaggcctcaggagcatctgatgtg
attctgtacaagatcgacgtccctgccaaccgctacgacctgctgtgtctggaggggctg
gtccggggactgcaagtcttcaagaatagggtggaggcccctcgctacacccgtgtgagt
ccggtcggcggcgagactcagagactgatcatcactaaagagacggcagcagtacggccc
catgctgtggcagcagtgctgaggaacatcaccttcactcaggagcgctacgacagtttc
attgagctgcaggagaagctgcatcaaaatatctgcaggaagaggagcctggtggccatc
ggcacccatgacctggacaccatctcggggcctttcacgtacacggccaaacccccgggg
gacatcagcttcacgccgctcaaccagaccaaagagtacacggcagcccagctgatggac
ctctacaagacggacagtcacttgcggcactatcttcacatcatcgaggacaagccccgg
taccccgtcatctacgacagcaatggcatcgttctgtcaatgcctcccatcatcaatggg
gaccattcaaaaatcaccctgcagacgaagaatgtcttcattgagtgcacagcgatggac
ctgacaaaggccaagatcgtgctggacatgatggtgaccatgttcagcgagtactgctca
cagcctttcacggtggaggaggcagaggtggtgttcccagatggaaagacctgcatatat
ccagaactggcttacaggaaggagaagctgtcccgcgacttcatcaaccgaaaagttggc
attaacgagtccacggagaggatcgcccagctgctcaccaggatgtgcctgcgctccacg
gccgccggggacgacatcgaggtggagatcccccccacccgctccgacgtcatccacgcc
tgcgacatcatggaagacgccgccatcgcctacggtttcaacaacatcacacgcaccacg
ccgcgcacttacaccgtagccaaccagttcccacttaacaaactgacggagctgctgaga
caagacatggctgcagccgggttcacggaggctctgaacttcgccctgtgttcccaagaa
gacattgccgagaaacttggaaaaaagatctccgagatcaaggcggtccatatttccaac
cccaagacagcagagtttcaggtggcgcgcaccacgttgctgcccggcctgctgaaaacc
atagctgccaacaggaagatgccccttcccctcaaactgtttgagatctcagatgtggtg
ctgaaggatgagaccaaagatgtcggcgccaggaacaggagacatttctgcgccatttac
tacaacaagagcccgggctttgaggtgatccacggcctgctggaccgaaccatgcagctg
ctggaggtgaagccggtccggggagagggataccacatccaggctgcagaggatcccacc
ttcttccccgggcgctgtgcggagatcttggtgcgtggaaagagcgtcgggcgcctcggc
gttctccacccagacgtcatcaaccgctttgagctgaccctgccctgctccgccctggag
atggacatcgagcccttccttggccacacggctgaaaccgtcctcacacacgacgtccct
atgcaggaaaccgtccagcataagttctgtacgcagggcgaaccccaccgcccactttcc
acaaaaactgtgtttggtgacatgagcactcaggaaggcctgaaagcgctggatcatttc
ctggccgacaagagctacatggagggattcaccgcgtcccaagctgacgttctcatgttc
gacgccgtccccgctcccccctcacaaaccttctgccacctctggcgctggcacagccac
atcaagtctttccagacggagagagctcatctcccattagccgggaatcagttcgtgctc
cctcccgccaacccctccgcgtcaacaaaccccaccagcgacgacgacgacatcgacctc
ttcggctccgacgacgaggccgagagcgccgaggcggccaggatcaaggagcagcgcctg
gccgagtacgccagcaggaagtccaagaagccggccgtcgtggccaagtcctccatcctg
ctggacgtgaagccctgggacgacgagacggacatggcccggctggagcagtgcgtccgc
agcgtgagcatggacgggctgctgtgggggcgggccaagctggtgcccgtgggctacggc
atacacaagctgcagataggatgcgtggtggaggatgagaaagtgggcacggatatgctg
gaggaagccatcaccgcctttgaggaatatgttcagtctgtggacgtggctgctttcaat
aaagtctga
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