Cololabis saira (Pacific saury): 133441497
Help
Entry
133441497 CDS
T09849
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04517
IgSF CAM signaling
csai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133441497
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133441497
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
csai04812
]
133441497
Cytoskeleton proteins [BR:
csai04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
133441497
Intermediate filaments
Intermediate filament-binding proteins
133441497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
SLATT_6
CREPT
Motif
Other DBs
NCBI-GeneID:
133441497
NCBI-ProteinID:
XP_061574833
LinkDB
All DBs
Position
4:11504774..11629609
Genome browser
AA seq
2775 aa
AA seq
DB search
MANASPDLDNAEAQRQLNNNNRPIGSGFWETECTSSKLFECSRIKALADERDAVQKKTFT
KWVNSHLARVSCRISDLYNDLRDGYMLTRLLEVLSGEMLPRPTRGRMRIHCLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLMWTVILRFQIQVIKIATEDNRETRSAKDALLL
WCQMKTAGYPEVNIQNFTTCWRDGLAFNALIHRHRPDLIEFNKLTRSNATHNLQQAFNVA
EHHLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALIVEGKRVGKVLDSCVEAE
KVIERYESLASDLLDWIEKTIAVISNQKFANSLTGVQQQLQAFTTYCTVEKPIKFQEKGN
LEVLLFTIQSKLRANNQKPYVPHEGKLISDINKAWERLEKAEHERGVALRKELIRQEKLE
LLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADIASYEERIGVV
VELSAEMEAEGYYDIRRILARKENILGQWSLLKELVGGRKTRLEKNLALQKTFQDMVYMI
DWMEDTQVQLLSKDFGKHLLEVDDLLQKHNLQEADIAVQAERVETLNTAALKFTTVEGYQ
PCDPQVICNRVSHVSSCVEELKQLAAKRRAELEESRKLWAFFQELEESEAWIREKSFILA
AQGHGKDLSSVLRLLQKHKTLAGELLAHRSLLQNTMKQGKQILSEKSFGTAGIQERIMEV
KCEWKRLEDQAAQHLSHLQEALNFFQFSTETDDLVAWLQDAYRLVSSEDFGHDEYSTQSL
LKKHRGVTEAVDKHRLHVLALRKHMVALPLQFRDQEEVQMRMGEVEQLYTEVAEVAVLRQ
QWLHDALAVYHMFSEVNACELWIDEKEQWLDRMEIPEKLEDVEVVAHRFESLDQEMNSLM
GRILDVNQIVQQLLDGGHPSSTEVRGCQDHLNSRWNSIVELVEQKKDQLDSMLRLQNYLL
ECAEIKSQIQDKRKAIDATQYVGSDLGGVLALQRRLSTMEGALAVLEPKLLHLQEEAEHL
ATAHGDRAMEILVPFDGISVEWEELKRTLQGCEDSLMVASRLQSFIQDLDSFLTWLVQTQ
TAAASDQLPNDLEEAEKLINKHAALKEEIGRYEEDYERLQAMNELLESEEAPLPQAALQQ
WLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAESFLNNQESALAHVELPTTVE
TVEAAIKKHKDFTTTMELNLHRIKAVIEAGESLISQSNIYSDRIRERVDTLANRGNQNRE
LAQRWLERLNVQWGLQRFLQDCHELGDWVHEKMLMARDGSRDETQKLHKKWLKHQAFMAE
LAQNKEWLDKIEREGQQLIQEKPELSPVVRRKLEEIRECWQDLESTTQARARQLFEANKA
DLLVQSYDSLDQRLGQLEGQLAYVDQGQDLTGVNKQLKKLQTLEGQMEEWYKEVGQLQVQ
AASIPQQMQMKGTVAERQTVVESRMVRLIEPLKERRRILLASKEVHQVARDLEDEILWVQ
ERLPLATSQEHGATLQAVQQLMKKNQMLQRELQGHRSRIEDVLDRAGLIASIRSPEADCI
RAGQDQLAHLWALLWAETERRQLVLDTMYQVQQYYLDTAEVEAWLSEQELHMMNEEKGKD
EPSTLQLLKKHLVLEQTIEDYAETIGLLSQQCRQLLEMGHPESEQISKRQSQIDRLYVSL
KDLVDERKSRLEQQYWLYQLNREVDELEQWIAQREVVASSPELGQDYEHVAILQEKFTEF
ASETGSVGQERVTAVNQMVDELIDYGHSDAATIAEWKDGVNEAWADLMELMETRGQMLAA
SHQLHKFFSDCREVMAQITDKHRRLPEVRARQGSTANTSSLQRLLHSFEQDIQLLVTQVR
QLQESAAQLRTVYAGEKAEAIACREHEVMQSWKELLTSCEECRVQITTETDKLRFFGLVR
DQIMWMESIICQIGTGDKPRDVSSVEVLMNYHHSLKSEVEARSRSTLECIEMGKTLLAAG
NPAAEEIKEKLDKVMAKQHELSEKWDTHWEFLQQLLEVHQFAQEAVVAEAWLTAHEPFIN
SNELGGSVDEVEQLIRRHEAFRKAAATWEERFSSLRRITTVEKLKAEQSTLPPTPLLGRK
VFLEPPDASHSPPTLPRLPISPVTRQTIYEQNEGSSPPSPSPATPTPSPSSVARRLGSMV
ASYSPVMNGSSYRHPPELRHTLEPQQPPEPWHAPELRHPPELRHPPEPRHPPELRHGGGV
VGVAAGLVQPAPSSIASVAAAAMLISANQARESAGSVRDQARESAGSVRDQARESAGSVR
DQAREFAGSARDQAAKAAWSHLLAVQPEVKSSQYLRQPKIKCLEDAVTPLLVASRLEKAR
EKRERDAMMGEMGSERAEVAVMAEVVLQEPGRERLHSEPTRGPRGSRGDPTGHAEPQVQT
QHRDQRLERQLSSEQLIQARRDELPQEVWREHAERRERRTLERQTSSEQEGHGSHGGHEG
RRRERDRHRLDRQESSEHDTGREHSDRRSTGGEKRSTMAEIVEQLQEREAAQARGEVPRL
PNGVPEKTEKTSRLERPRARDRPKPRRRPRPKETGETTRRSRSAPAQSSPAVQQPPTHTA
HHEGFLFRKLDIETLKKSTNSRSWVNLYCVLNKGEMGFYKDAKNTSTPYNNEPLLNLSHC
HCDVTNGYKKKKNVFTLKTKDGSEFLFHAKDEEDLKAWVNNITASISEHEEIAKWGQPQP
TTSSTDEGTRRDGSKGDNRSERGGSDRIERIEEVDLEKEKEKEREKERERGERSEKSERG
GRSDAKRSEKSGKKK
NT seq
8328 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgcctccccggacctggacaacgccgaagcccagcgccagctcaacaacaac
aaccgaccgatcggctctgggttctgggagacggagtgcacgagctccaagctgttcgag
tgctcgcgcatcaaggccttggcagatgagagagatgctgtgcagaagaagactttcacc
aagtgggtgaactcccacctagccagagtgtcctgtcgaatatcggacctgtacaacgac
ctgcgggatgggtacatgctcacccgactgctggaggtgctcagcggagagatgctgccg
agacctacgaggggccgcatgcggatccactgcctggaaaatgtggataaagccctgcag
ttcctcaaggagcagagggttcacctggaaaacgttggttcccacgacatcgtggacgga
aaccaccgcctcaccctgggactcatgtggaccgtcatcctccgcttccagatccaggtg
atcaagatagcgacggaggacaaccgagagacgcgctccgccaaggatgcgctgctgctc
tggtgccagatgaagactgcagggtaccctgaggtcaacatccagaacttcaccacctgc
tggagagacggcctcgccttcaacgccctcatacacagacacagaccggacctaatagag
ttcaacaagctgacccgctccaatgcgacccacaacctccagcaagccttcaacgtcgcc
gagcatcacctgggcctcaccaagctgctggaccccgaggatgtgaacacggaaaacccg
gatgagaagtccatcatcacctacgtggtctcctactaccactacttctccaagatgaag
gctcttattgtggaggggaagagagtcgggaaggtgctggacagctgcgtggaggcggag
aaggtcatcgagcgctacgagtccctggcgtcggacctgctggactggatcgagaagacc
atcgccgtcatcagcaaccagaagtttgccaactcgctgacgggcgtccagcagcagctg
caggccttcaccacctactgcaccgtggagaagcccatcaagttccaggagaaggggaac
ctggaggttctcctcttcaccatccaaagcaaactcagagccaacaaccagaaaccgtac
gtgcctcacgaggggaagctgatctccgacatcaacaaggcgtgggagaggctggagaag
gcggagcacgagaggggcgtggccctgcgcaaggagctgattcgccaggagaagctggag
ctgctggctcagcgcttcgaccacaagaccaccatgaggcaggcgtggctcaacgagaac
cagcggctcgtgtcacaggacaacttcggctacgacctgccggcggtggaggcggccatg
aagaagcacgaggccatcgaggcggacatcgcctcgtacgaggagcggatcggcgtggtg
gtggagctgtcggcggagatggaggcggagggctactacgacatccggcgcatcctggcg
cggaaggagaacatcctgggccagtggagcctgctgaaggagctggtgggcggcaggaag
acgcggctggagaagaacctggcgctgcagaagactttccaggacatggtgtacatgatc
gactggatggaggacacgcaggtccaactgctctccaaggacttcgggaagcatctcctg
gaggtggacgacctgctgcagaagcacaacctgcaggaggccgacatcgccgtgcaggcc
gagagggtggagacgctcaacacggccgcgctcaagttcactaccgtggagggctaccag
ccgtgcgacccgcaggtgatctgtaaccgcgtcagccacgtctcctcctgtgtggaggag
ctgaagcaactggccgccaagagacgcgccgagctggaggagtccaggaaactgtgggct
ttttttcaggagctggaggaatcggaggcttggatccgggagaaaagcttcatcctggcg
gctcagggacacggcaaagacctgagcagcgtcctcaggttgctgcagaaacacaagact
ctggccggcgagctgctggcgcaccggtcgctgctgcagaacaccatgaagcaggggaag
cagatcctgagcgagaagagcttcggcacagcgggcatccaggagcgcatcatggaggtg
aagtgcgagtggaagcggctggaggaccaggcggcgcagcacctcagccacctccaggag
gcgctcaacttcttccagttctccacggagacggacgacctggtggcctggctgcaggac
gcgtaccgcctggtgtccagcgaggacttcggccacgacgaatactccacgcagtcgctg
ctgaagaagcaccgcggcgtcaccgaggccgtggacaagcaccgcctgcacgtgctggcg
ctgcgcaaacacatggtggcgctgccgctgcagttccgcgatcaggaggaggtgcagatg
cgcatgggggaggtggagcagctgtacacggaggtggcggaggtggcggtgctccggcag
cagtggctccacgacgcgctcgccgtctaccacatgttcagcgaggtcaacgcctgcgag
ctgtggatcgacgagaaggagcagtggctggaccggatggagatccccgagaagctggag
gacgtggaggtggtggcgcacaggttcgagagcctggaccaggagatgaacagcctgatg
ggacggatcctggacgtcaatcaaatcgtccagcagctcctggacggaggtcacccctct
tccacggaggtccgaggctgccaggaccacctcaactccaggtggaacagcatcgtggag
ctggtggagcagaagaaggaccagctggactccatgctgcgtctgcagaactacctgctg
gagtgtgccgagatcaagtcccagatccaggacaagaggaaagccatcgacgccacccag
tacgtgggcagcgacctggggggggtgctggcgctgcagagacgcctctccaccatggag
ggggcgctggcggtcctggagcccaaactgctgcacctgcaggaggaggcggagcatctg
gccacggcgcacggagaccgggccatggagatcctggtgcccttcgatggcatcagcgtg
gagtgggaggagctgaagcggaccctgcaggggtgcgaggactcgctgatggtggccagc
cggctacagagcttcatacaggacctggactcgttcctcacctggctggtccagacccag
acggccgcggcctccgaccagctccccaacgacctggaggaggcggagaagctcatcaac
aagcacgccgccctcaaggaggagatcggccggtacgaggaggactacgagcggctgcag
gccatgaacgagctgctggagtcggaggaggcgccgctgccgcaggccgccctgcagcag
tggctgcagaagctggacgtgggctggaacaagctgctggagatgtgggagagcaggagg
gaggttctggtccaggcccacatcttccacctgttcctgcgggacgtcaagcaggccgag
tccttcctcaacaaccaggagtcggccctcgctcacgtggagctgcccaccacggtggag
acggtggaagccgccatcaagaagcacaaggacttcaccaccaccatggagctgaacctg
caccgcatcaaggccgtgatcgaggccggcgagagtctgatcagccagagcaacatctac
tcggaccgcatcagggagcgcgttgacaccctggccaacagggggaaccagaaccgggag
ctggcccagcgctggctggagaggctgaacgtgcagtgggggctgcagaggttccttcag
gactgtcacgagctgggggactgggtgcacgagaagatgctgatggcgagggacggcagc
cgggacgagacccagaagctccacaagaagtggctgaagcaccaggccttcatggccgag
ctggcccagaacaaggagtggctggacaagatagagagggagggccagcagctgatccag
gagaagcccgagctcagcccggtggtccggaggaagctggaggagatccgggagtgctgg
caggacctggagagcaccacgcaggcccgagcccgccagctcttcgaggccaacaaggcc
gacctgctggtgcagagctacgacagcctggaccagcggctggggcagctggaggggcag
ctggcctacgtggaccagggccaggacctcaccggcgtcaacaagcagctcaagaagctg
cagaccctggaaggccagatggaggagtggtacaaggaggtggggcagctgcaggtgcag
gcggcctccatcccgcagcagatgcagatgaaggggacggttgccgagcgacagacggtg
gtggagtccaggatggtgcgcctgatcgagccgctgaaggagaggagacgcatcctcctg
gcctccaaggaagtccaccaggtcgcacgagacctggaggacgagattctgtgggtgcag
gaacggctcccgctggccacgtctcaggagcacggcgccaccctgcaggccgtccagcag
ctcatgaagaagaaccagatgcttcaaagggagctgcagggacaccgcagcaggatcgaa
gacgtcctggaccgggcgggactcatcgcctccatccgcagccccgaggccgactgcatc
cgggcgggccaggaccagctggcccacctgtgggctctgctgtgggccgagacggagcgg
cggcagctggtcctggacaccatgtaccaggtgcagcagtactacctggacacggccgag
gtggaggcctggctgagtgagcaggagctgcacatgatgaacgaggagaaggggaaggac
gagccgagcaccctgcagctgctgaagaagcacctggtgctggagcagaccatcgaggac
tacgccgagaccatcggcctgctgtcgcagcagtgccggcagctgctggagatgggccat
ccggagagcgagcagatcagcaagcggcagtcgcagatcgaccggctgtacgtgtccctg
aaggacctggtggacgagaggaagagccggctggagcagcagtactggctgtaccagctg
aaccgggaggtggacgagctggagcagtggatcgcccagcgggaggtggtggccagctcg
cccgagctgggccaggactacgagcacgtcgccatcctgcaggagaagttcacagagttt
gcgtcggagacggggagcgtggggcaggaacgcgtgacggccgtcaatcagatggtggac
gagctgatcgactacggccactcggacgcggccaccatcgccgagtggaaggacggggtg
aacgaggcctgggccgacctgatggagctcatggagacccggggccagatgctcgccgcc
tcgcaccaactgcacaagttcttctccgactgcagggaggtcatggctcagattacggac
aaacatcggaggctgccggaggtccgagcccggcagggcagcaccgccaacaccagctcg
ctgcagagactcctgcacagctttgagcaggacattcagctgctggtcacccaggtgcgt
cagctgcaggagagcgccgcccagctgaggacggtgtatgcgggcgagaaggccgaggcc
atcgcgtgccgcgagcacgaagtcatgcagtcgtggaaggagctgctgacgtcctgcgag
gagtgccgggtccagatcaccacggagacggacaagctgaggttcttcggcctggtccgg
gaccagatcatgtggatggagtccatcatctgccagataggaaccggagacaagcccagg
gacgtgtcctcggtggaggtgctgatgaactaccaccacagcctgaagagcgaggtggag
gcgcggagcaggagcaccctggagtgcatcgagatggggaagacgctgctggccgccggg
aaccctgcagctgaggagatcaaggaaaagctggacaaggtgatggccaagcagcacgag
ctgtctgagaagtgggacacgcactgggaattcctgcagcagctgctggaggtccaccag
ttcgcccaggaggccgtggtggccgaggcctggctgacggcccacgagccgttcatcaac
agcaacgagctgggcggcagcgtggacgaggtggagcagctcatccgccgacacgaagcc
ttccgcaaagccgccgccacctgggaggagaggttcagctctctgcggcggatcaccacg
gtggagaagttgaaagcggagcagagcacgctgcccccgacgcccctgctgggtcgtaag
gtcttcctggagcctcccgatgcctcgcacagcccgcccacgctgccccgcctccccatc
tcccccgtcacccgacagaccatctacgagcagaacgagggcagctcgccgccctcgccc
tcccccgccacgccgaccccctcgccgtcctccgtggcccggcggctggggtcaatggtc
gccagctactccccagtgatgaacggctccagctaccggcaccccccggagctccggcac
accctggagccccagcaacccccggagccctggcacgccccggagctccggcaccccccg
gagctccggcaccccccggagccccggcaccccccggagctccggcacggcggcggcgtg
gtgggcgtcgccgccgggctggtccagccagccccctcctcaatagcctccgtcgccgct
gcggccatgttgatctccgccaaccaggcgcgggaatccgccggctcggtgagggaccag
gcgcgggaatccgccggctcggtgagggaccaggcgcgggaatccgccggctcggtgagg
gaccaggcgcgggaatttgccggctcggcgagggaccaggcagcgaaggccgcctggtcc
cacctgctggcggtgcagccggaggtcaagtcctcccagtatctacggcaacccaagatc
aagtgcctggaggacgcggtgacgccgctgctggtggccagccggctggagaaggcgcgg
gagaagagggagcgggacgccatgatgggcgagatgggcagcgagcgggcggaggtggcg
gtgatggccgaggtggtgctccaggagccgggccgcgagcgcctgcacagcgagcccacc
agggggccccgggggtcccggggcgaccccacgggccacgccgagccgcaggtccagacg
cagcaccgggaccagcggctggagcggcagctgtccagcgagcagctgatccaggcgcgc
agggacgagctgccgcaggaggtgtggagggaacacgccgagcggcgggagcggcggacg
ctggagcgccagacgtccagcgagcaggagggccacgggagccacggcggccacgagggc
cggcgccgagagcgggaccggcaccggctggaccggcaggagtccagcgagcacgacacc
gggagagagcactcggacagacgctccacaggaggagaaaagagatccaccatggcggag
atcgtggagcagctgcaagagagagaagctgcacaggcccgcggggaggtgccccgcctg
cccaacggggtcccggagaagacggagaaaacttcccgcctggaacggcctcgagcccgg
gacagacccaaaccacgacgccggccgcgcccgaaagagaccggagaaaccacccggagg
tcccggtccgccccggcccagagcagcccggcggtgcagcagccgcccacacacacagca
caccacgagggcttcctgttccgcaagctggacatcgagaccctgaaaaagagcaccaat
agcaggtcatgggtcaacctgtactgcgtgctgaacaagggggagatgggcttctacaag
gacgccaagaacacgtccacgccctacaacaacgagcccctgctcaacctctcccactgc
cactgcgacgtcaccaacggctacaagaagaagaagaatgtcttcactctcaaaacgaag
gatggcagtgagtttttgtttcatgcaaaagacgaggaggacctgaaggcctgggtgaac
aacatcacggccagtatctccgagcacgaggagattgccaaatggggccagccccaacca
actacctcatccaccgacgaggggacgcggcgcgacggcagcaagggcgacaaccgctcg
gagcggggaggctcggaccgcatcgagcggatcgaggaggtcgacctggagaaggagaag
gagaaggagagagagaaggagagggagaggggggagcgctcggagaagtcggagcgaggc
gggaggtcggacgcaaagcgctcggagaagtcggggaaaaagaagtga
DBGET
integrated database retrieval system
