KEGG   Cololabis saira (Pacific saury): 133441557
Entry
133441557         CDS       T09849                                 
Symbol
pnkp
Name
(RefSeq) bifunctional polynucleotide phosphatase/kinase
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
csai  Cololabis saira (Pacific saury)
Pathway
csai03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:csai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    133441557 (pnkp)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:csai01009]
    133441557 (pnkp)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csai03400]
    133441557 (pnkp)
Enzymes [BR:csai01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     133441557 (pnkp)
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     133441557 (pnkp)
Protein phosphatases and associated proteins [BR:csai01009]
 HAD phosphatases
  Other HAD phosphatases
   133441557 (pnkp)
DNA repair and recombination proteins [BR:csai03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     133441557 (pnkp)
SSDB
Motif
Pfam: PNK3P AAA_33 FHA_2 Hydrolase_6
Other DBs
NCBI-GeneID: 133441557
NCBI-ProteinID: XP_061574971
LinkDB
Position
4:complement(15926095..15937775)
AA seq 600 aa
MSCSLSGSSGARVLLEDGRALILGRGPQTRVADKRCSRHQVKVVACYADQDVVVTQLGPN
PSFLDGEKLVRNQSGKLRQGGTLYLVDQSHPFTLSFSLSSNGTASSMAKSGLKATDKTKM
GRNGKEAQSSPTPKRSIKDFFPTSPTKPSKRQLSPDKGHPDLKRQKRDEDRTMEDEDEEE
ARLAEEKLKHLQEFAEKSMAGESKGIQSSPSSSSIKACTKSSWQQTGNMMFYTAAGVKAS
DKIAGFDIDGCIITTKSGKVFPTAPDDWKILYPEIQPRLASLLRKGYKVVFFTNQMGITR
GKLRPEVFKSKVEDVLATLQLPVQVFVATGPGLFRKPVMGMWNHLSEKANDGVTVDKAQS
FYVGDAAGRPENWAPGKKKKDFSCSDRLFALNIGLLFHTPEEYFLGWKSAPYSLPEFDPR
KLDSTARLYDPPSASLTSSETEVIVAVGYPASGKSTFFHTHIVPKGYVYVNRDTLGSWQS
CVSACERALREGRSVAVDNTNPDPESRKRYVDVAKAAGVSCRCFQFSASLHQAKHNNRFR
EMAPSDGKHAKVNDMIFHSYKKQFVAPALSEGFSQILQVHFVPSFSDSQSESLFRLFSEG
NT seq 1803 nt   +upstreamnt  +downstreamnt
atgtcgtgcagcctgagcggatcctcgggggctcgggtcctcctggaggacgggcgagcc
ctgatcctcggccggggcccgcagacccgggtggccgacaagagatgctccaggcaccag
gtgaaagtggtggcttgttatgcagaccaggatgtggttgttactcagctggggcccaat
cccagtttcctggatggtgagaaacttgtccggaaccagtcagggaaactcaggcaggga
ggcaccctctatctggtcgaccagagccatcctttcaccctcagcttctctctgagctcc
aacggcacagcctccagcatggctaagagcgggctgaaggcaacagataagactaaaatg
ggaaggaatgggaaagaggctcagtccagtccgacgccgaaacgcagcattaaggacttc
tttcccacttctcccacaaagccgtctaaaaggcaactgagtccagacaaaggacatcct
gatctgaagcgacaaaaaagagacgaggatcggacgatggaagacgaagacgaagaggaa
gcgaggctggcagaggaaaagctcaagcatctgcaggagtttgctgaaaagtctatggca
ggggagagcaaaggcatccaatcttccccctcctcatcatcgataaaggcgtgcacgaag
agcagctggcagcagacgggcaacatgatgttttacactgctgcaggcgtcaaagcaagt
gacaagattgctggctttgacattgatggctgcatcatcaccaccaaatctggcaaagtc
tttcctacggcaccagacgactggaagattctgtatcctgagattcagccccggctcgcc
agtttgctcagaaaaggatacaaggtggtgttcttcaccaaccagatgggcatcactaga
ggcaaactgagacccgaggtcttcaagtctaaagtggaggacgtcctcgccaccctgcag
ctgccagtgcaggtgtttgtagcaactggtccgggtctttttaggaaaccagtgatggga
atgtggaatcacttgagtgagaaggctaatgacggtgtgactgttgacaaggcccagagt
ttttatgtcggagatgctgcaggaagacctgagaattgggctccaggaaagaaaaagaag
gatttttcatgcagtgatcggctgtttgctctgaacattggactgctgttccacaccccc
gaggaatacttcctgggctggaagagcgccccctacagcttgcctgagtttgaccctagg
aagcttgactccacagccaggctttacgacccaccatcagcctcgctcacctccagcgag
acagaagtcatcgttgccgtgggttaccctgcatctggtaaatccaccttcttccacacc
cacattgttccaaagggctacgtctacgtcaacagggacacactgggctcgtggcagagc
tgcgtgtcggcgtgtgagcgtgctctgagagagggccgcagcgttgccgtggacaacacc
aacccagacccagagtctcgcaaacgatatgtggacgttgccaaggcagcaggcgtgtct
tgtcgctgtttccagttctccgcctctctgcatcaagccaagcacaacaacagattccgt
gagatggctccatccgacggcaaacacgccaaggtcaacgacatgattttccacagttac
aagaaacagttcgtggctccggccctgtctgagggattctcccagatcctgcaggtccac
tttgttccgagcttcagcgacagccagagtgaatctctgttcagactgttctccgagggc
tga

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