Cololabis saira (Pacific saury): 133441652
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Entry
133441652 CDS
T09849
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133441652 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133441652 (trip12)
Enzymes [BR:
csai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
133441652 (trip12)
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
HECT type E3
133441652 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
133441652
NCBI-ProteinID:
XP_061575158
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All DBs
Position
4:complement(23043873..23107545)
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AA seq
2072 aa
AA seq
DB search
MSNRPNSNSGGSLRRSQRNTAAAQPQDHTVAGRLQSEQVKHKANSPPESRRPNSKAPKAT
ASSATGQSRGHSSRRSGLTLPVGSLVLQDDPEAAGTSEQERPGPQSKSEGTRVLKRSEAP
DQISVLGLTPAKKPKSLPPPRDNTSETKKGSAKSKKRAATSESPASSGRGQGKKSVVAGA
SPVQKRKKSDSLPGLSSTAGSLPNCTEGRTAKPTKLASKSAASAKAGCSNVTDSSSSASS
SSSSSITGTKSVDTQGARVKQGKDQTKARRSRSASSPSPRRSTRDKEQAKTASSSKFEWA
ARFNPKVNLPKPKLPLPGSSKTETSKPGPSGLQAKLASLRKSTNKKRSESPPAELPSYRR
STRQKTTGSCASTSRRGSGLGKRGAADARRQEKMADSDNNQDGANSSAARADEASQGASA
SSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGAS
SKAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNF
EIMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQIIQFIDVAEQALTALEMLSRRHSK
AILQASGLADCLHYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQD
KKSVESTCLCFARLVDNFQHEENLLQEVASRDLLTNIQQLLVVTPPVLSSGMFIMVVRMF
SLMCSNCPCLAVQLMKQNIAETLRFLLCGASNGSCQEQIELVPRSPQELYELTSLICELM
PCLPREGIFAVDVMLKKGSAQTTEGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEIS
LSTLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLANPNTGGHQEVRREDARAQLMKEDP
ELAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLRDVLRNHAVSSHIA
SMLSSQDLKIVVGSLQMAEILMQKLPDVFSVYFRREGVMHQVKNLAESESFLVTNPPKAC
PSGTASLCTTTISTASTTSANNATADLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPKR
GPRRPKYSPPRDDDKVDNQAKSPTSTQSPKSSFLASLNPKTWGKLGAQTNNANSEPSRTA
GVSGLARAPPKDSISNNRDKIKAWIKEQATKFVERYFNSENVDGSNPALNVLQRLCTATE
QLNLQVDGGLECLVEISSIVSESDVSSFEIQHSGLVKQLLVYLASNTDRDLLSRDVRLKR
FLHVFAGCPSLKKVEAVHINWRVPGLEPIGRLNPTETAPFLALVYKMNSCLSQMEQFPVK
VHDFPSGNGNGSRGSQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIER
YLVVRGYGRIREEDEDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPYNMTVY
QAVRQYSLQAEEERESTDDEANPLGRAGIWTKTHTIWYKPVREDEDGSKDAVGGKRGRAQ
TAPTKTSPRNAKKQDELWHDGVCPSVVSPLETYLNSDPPETITFDDPSLEVILLVRVLHS
ISRYWFYLYENAACKEIVPTNEFINSKLTAKANRQLQDPLVIMTGNIPTWLIELGKSCPF
FFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINRDELLK
QAESVMQDLGSSRAMLEIQYENEVGTGLGPTQEFYALVSQELQRADLGLWRGEEVTLANP
KGNQEGTKYMFSSRGLFAVPFGRTTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLGL
PFYKWMLRHEMSISSHDLVNIDPGVAKSIQHLEDIIRQKKRLEQDRSQTRETLQQALESL
NMNGCSVEDLGLDFTLPGFPNIELKKGGKDVPVSIYNLEEYLRLVVYWTLNEGVSRQFES
FREGFESVFPLHHLQYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSRAIRFLF
EVLSSFDAEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCV
NYLKLPDYSSIEIMREKLLIAAREGQQSFHLS
NT seq
6219 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaattcaggggggtcactgcgccgttcacagaggaacact
gccgcggcccagccacaagaccacacagtagctggaaggttgcagtcagagcaggtaaaa
cataaagcaaattccccacctgaaagtagaagacctaattctaaggctcccaaagccaca
gccagctcagccactggccagtccagagggcacagctcaagaagaagtggtcttacattg
cccgtgggttcactcgtgctgcaagacgaccctgaggctgcaggaacatctgaacaagaa
cgaccaggcccacaatctaaaagtgagggcacccgagtcctgaaacgaagtgaagctcct
gaccaaattagtgtccttggactgactcctgccaagaagcccaaatcgcttcccccaccg
agagacaatacctcagagaccaagaaaggctcggctaagtccaagaagagggcagctacc
tctgaatcgcctgcatcatcaggtcgaggccagggcaagaagagtgtggttgctggggct
tccccagtccagaaacggaaaaaatcagactctctccccggtctaagtagcaccgcaggg
tccctccctaattgtaccgagggaagaactgcaaaacctaccaagctggcgtctaaatcg
gccgcctcagccaaagctgggtgtagcaacgtgacggactcctcctcatctgcctcctca
tcttcttcgtcctccatcacaggcaccaagagtgttgatacccagggtgctcgagtcaaa
cagggaaaagatcagaccaaggcacgtcgttctcgctctgcatctagcccatctccacgt
cgtagtacacgtgacaaggagcaggccaaaactgccagctcttcaaaatttgagtgggcg
gcacgcttcaaccccaaagttaacctgccaaaacccaagctgcccctacctggatcctcc
aaaacagagacttccaaacctgggccatcgggattacaagctaaactagcaagtttaaga
aaatctaccaacaagaagcgcagcgagtctcctccagcagagctccccagttatcggcgg
agcacacgccagaagaccacgggctcctgtgccagcaccagtcggcggggctcaggcctg
ggcaagcgcggggcagccgacgctcgccggcaggaaaaaatggccgactccgacaacaac
caagatggggccaactcatccgctgctcgcgccgatgaggcatcacaaggggcttcagct
tcaagttcagttgccggagcagtgggcatgaccacctctggagagagtgagtctgatgat
tctgaaatgggaagacttcaagctctgctggaagccagaggtttaccccctcatcttttt
gggcccctgggaccccgtatgtcacagctgtttcacaggaccattggcagtggagccagt
tctaaggctcagcagctcctgcagggccttcaggccacaggtgacgagtctcaacaactc
caggctgcaattgagatgtgccagttactagtgatgggcaatgaagaaacacttggtgga
tttcctgtcaagagtgtggtgcctgctttgattacactgttacaaatggagcataacttc
gaaattatgaatcatgcttcacgtgcactcacttacatgatggaggcacttcctcgatct
tctgctgtggtggttgatgctattcccgtgttcttggagaagcttcaaattatccagttt
attgatgtagctgagcaagctctgactgctttggaaatgttgtcaagacgacacagcaaa
gccattttgcaggctagtgggcttgcggactgccttcattacctggagttctttagcatc
aatgctcagaggaatgcgttggctattgcagccaactgctgtcagagcataactcctgat
gagttccactttgtcgcggattctctgccattgttgactcagaggctcacacaccaggat
aaaaagtcagtcgaaagcacttgtctctgtttcgccaggctggtagataactttcaacat
gaagagaacctgctgcaggaagtggcatcccgggacttgttgaccaacattcagcaattg
ctggttgtgacccctcctgtactcagctcggggatgttcatcatggttgtgcgcatgttt
tcattgatgtgctccaactgtccttgcctggcagtccagcttatgaaacagaacattgca
gagactctgcgttttctgttgtgtggggcatcaaatggcagctgccaggagcagattgag
ctggtaccccgcagcccccaggagctctatgaactgacctccctgatatgtgagctgatg
ccctgcctgcccagagaagggatctttgcagttgatgtaatgttgaaaaagggcagtgcc
cagacaacagagggagctatttggcagtggagggatgatcgaggcctgtggcatccctac
aaccgtattgacagccgcatcattgagacagcccaccagaatggggaagatgagatcagt
ttgtcaaccctgggccgggtgtacacaattgacttcaactctatgcagcagataaatgaa
gacacaggaacagcacgtggaatccagagaaagcccaatcctcttgccaaccccaataca
gggggtcaccaagaggtccgtcgagaagacgcacgtgcccagttaatgaaggaggaccct
gagctggcaaagtgtttcattaaaacactttttggcgtcttgtatgaggtgtacagctca
tcagctggtccagctgtccgacacaagtgccttagagccatcctcaggatcatctacttt
gctgatgcagagctgctgagggatgtgctgaggaaccatgctgtgtccagtcacattgcc
tccatgctatccagccaggacctgaagattgtagtgggttctctgcagatggctgagatc
ctcatgcagaagctgcctgatgttttcagtgtctatttcagaagagaaggtgtaatgcac
caggtgaagaaccttgcagagtcggagagctttcttgtcactaatcccccgaaggcttgc
cccagtggcacagccagtctctgtactacaaccatcagcactgcatccaccacatctgca
aataatgccacagctgaccttggctcacccagcttccagcacagcatggatgactctctg
gacctcagccctcagggccgattaagtgatgtcctaaagaggaaacgacttccaaaaagg
ggacccagaaggcccaaatactctcccccaagagatgatgataaagtagacaatcaagcc
aagagccctaccagtactcagtcacctaagtcatccttcctggccagtctcaatcccaag
acttgggggaagctcggtgctcagaccaataacgccaactctgagccctcacggacagcg
ggggtgagtggcctggcaagggcccctcccaaggactccatttcaaataacagagacaaa
ataaaagcatggataaaggaacaggcaactaagtttgttgaacgttacttcaactctgaa
aatgtggatggcagcaaccctgcactgaatgtactccagagactttgcacagccaccgag
cagctcaatctgcaggtggatggtggtttggagtgcctggtggagatctccagcattgta
tcagaatctgatgtgtcgtcttttgagatccagcacagtgggctggtgaagcagctcctg
gtgtacctggcctcaaacacagatagagacttgctgagtcgggatgtgcggctgaagagg
ttcctccatgtgtttgccggttgtccgtctttgaagaaggtggaggctgtgcatataaat
tggagggttccaggattggagcccataggccgactgaaccctacagagactgcacctttc
ctggcactggtgtacaagatgaacagctgtctcagccagatggagcagtttccagtgaag
gtgcacgacttccccagtggtaatggcaatggcagcaggggatctcaagcactcaagttt
ttcaacacacaccagctcaagtgtcagctgcagagacacccagattgcactaatgttaaa
cagtggaaaggtggtccagtgaagattgaccctctggccctggtgcaagcaattgagcgt
tatcttgtggtcagaggatatggtcgaatcagggaagaggatgaagacagtgatgatgac
ggttcggatgatgaaatcgacgaatcactggcggcgcagttcctcaattctggcagtgtt
cgccacaggctacagttctatattggtgaccacttgttaccatacaacatgacagtatac
caggctgtacgacagtatagtcttcaggcagaagaagaaagggaatcaacagacgacgag
gcaaatccccttggacgtgctggaatttggaccaaaacacacactatatggtataaacct
gtgagagaagatgaagatggtagcaaagatgctgtgggaggaaagaggggccgagcccag
actgctcccaccaaaacctcacctcgcaatgccaagaagcaggatgagctgtggcatgat
ggtgtctgccccagtgtcgtcagccctttagagacatacctcaattcagatccaccagag
accataacatttgatgacccttccttggaggtcatcttgctggtgagggttctacactcc
atcagtagatactggttctacttgtatgagaatgctgcatgtaaggaaattgttcctaca
aatgagttcatcaacagtaaactgactgccaaagccaaccgtcagctacaagacccgctg
gtcatcatgacggggaacatccctacctggcttattgaacttggaaagagctgccccttc
ttcttcccctttgacacccggcagatgttgttctatgtaactgcttttgatcgtgacaga
gccatgcagcgcttgctggacacaaaccctgagatcaaccagtcagattctcaggatagt
agagttgcaccacgtctcgacaggaaaaagaggacgataaaccgcgacgagctccttaaa
caggcagagtctgtaatgcaggacctcgggagctccagggcaatgctggagattcaatac
gagaatgaggtcggtacaggtctcggtcccactcaggagttctatgctctggtatctcag
gagcttcagagagctgatcttggtctttggagaggagaggaagttactctggccaaccct
aaaggaaaccaagagggcactaagtacatgttcagctccagagggctgtttgctgttccc
tttggtcggacaaccaaaccagcacacatagccaaaatcaaaatgaagttccgtttcctt
ggaaagttaatggccaaagccattatggacttcagactgctggatttgcccttaggcctt
ccattttataagtggatgctgcgacatgagatgtctataagctcccatgatttggtgaac
attgatcctggtgtggccaagtccatccagcacctggaggacatcatccgccagaagaag
aggctggaacaggaccgctcacaaactagagagactctacagcaggctctagaaagcctg
aacatgaacggctgctctgtggaggacttgggtttggacttcactcttccaggattccca
aacattgaacttaaaaaaggtggcaaagatgtcccagtctccatctacaacctggaggag
tacctcaggttggtggtgtactggaccttaaatgaaggagtgtcgagacaatttgagtcc
tttagggaagggttcgagtcagtcttccccttgcatcacctgcagtatttctacccagag
gagctcgaccagttgctgtgtggcagtaaatcagaaacgtgggatgtcaagacgttgatg
gagtgttgtcgaccggaccatggatacacgcatgacagccgtgccattcggttcctgttt
gaggtcttgagtagctttgatgctgagcagcagaggctctttctgcagtttgtcacagga
agcccgagactgcctgttggaggttttcggagcctgaatccccctctgacaattgtgaga
aagacatttgagtcaacagagaacccggacgacttcctcccttcagtcatgacgtgtgtc
aactacctgaagctgcctgactactctagcatcgagatcatgcgagagaaactgttgatt
gcagctcgagagggccagcagtcgttccacctttcctga
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integrated database retrieval system
