Cololabis saira (Pacific saury): 133441702
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Entry
133441702 CDS
T09849
Symbol
vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133441702 (vps53)
Membrane trafficking [BR:
csai04131
]
Protein recycling
Others
EARP complex
133441702 (vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
133441702 (vps53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
GrpE
hAT-like_RNase-H
FBF1
Laminin_II
COG5_N
NBD94
VPS51_Exo84_N
Sec8_N
Motif
Other DBs
NCBI-GeneID:
133441702
NCBI-ProteinID:
XP_061575259
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Position
4:26937706..26966139
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AA seq
828 aa
AA seq
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MMEEEEFEFAEDLEAILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDDVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQIAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQG
VVNVLEHFHKYMGIPQIRQLSERVKAAQSELGTQILADFEEAFPSQGSKRPGGPSNVLRD
ACLVANVLDPRIKQEIIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLLDYEE
KYGRMFPEEWCMTERIAVEFCHITRVELAKVMRTRAKEIEVKLLLFAIQRTTNFEGLLAK
RFTGCTLTDAPGQKRPESPLEATNPFLEDDPGEDVGTEKDEDLVKPRKPKAPDNPFHGIV
SKCFEPHLYVYIESQDKNLGELIERFVADFRAQGPPKASTEEGGAVLPSCADLFVYYKKC
MVQCSQLSTGEPMIALTTIFQKFLREYAWKILSGNLPKSSSNSGGLTITSLLKEKEGCEA
SKFTVDELCLICSILSTAEYCLATTQQLEEKLKEKVDKVLVERINLTGEMDTFSTVISNS
IQLLVQDLDAACDPALTAMSKMPWQSVEHVGDQSPYVTSIIMHVKQNVPIIRDNLASTRK
YFTQFCIKFTNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVLRKA
PASYTKIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADGNPETFQKILDMKGLKRS
EQSSMLELFRQRLPTPPDGGPSLSFSTPTPEQESSRIRKLEKLIKKRL
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaagaggaatttgaatttgcagaagatttagaggcgattttgcatctaacc
ccggaggttcagttagccattgaacaggtgttcccgagccaggacccgctggacagagca
gacttcaatgctgtggagtacatcaacacactctttcctactgagcagtctttggctaat
attgatgacgttgtaaacaaaattcgtctaaagattcgccgcctcgatgacaacatcagg
acggtggtgagaggacagaccaacgtgggtcaggatggtagacaggctttggaggaggcc
cagatagccatccagcaactctttgggaaaatcaaagatattaaggacaaagcagagaaa
tctgaacaaatggttaaggagattacgagggacataaagcagctggaccatgccaagcgc
caccttactacttccatcaccaccctcaaccacctgcacatgctggcagggggggttgac
tctttggaagcaatgaccagaaagaggcagtatggtgaggtggctaacctgctgcaggga
gtggtcaatgtgctggaacatttccacaagtatatgggcatacctcagatcagacagctt
tcagaaagagttaaggcagcgcagagtgagttggggactcagatcctggcggactttgaa
gaggcgttcccatctcaaggctccaagagaccaggtggacccagtaacgtgctgagagat
gcctgtctggtggcaaacgtgctcgatcctcgtatcaagcaggagatcattaaaaagttc
atcagacagcatctttcagagtatttggttttgttccaggaaaatcaagatgttgcttgg
ctggacaagattgatcgccgctatgcctggatcaaacgacagctgttagactatgaagaa
aagtatgggcgcatgtttcctgaggagtggtgcatgacggagcgtattgctgtcgagttt
tgccacatcaccagggtggagttagccaaggtgatgcgaacacgggcaaaagagattgag
gtgaaactgctcctgtttgctattcagaggaccacaaacttcgaaggtttactggccaaa
cgcttcacaggatgcaccttgacggatgcaccggggcagaagaggcctgagagcccacta
gaggcaactaatccctttcttgaagatgatccaggagaggatgtgggcacagaaaaggat
gaagatcttgttaagcccaggaagcccaaagctccagacaaccctttccatggaattgtc
tccaagtgctttgaacctcatctgtacgtctacattgaatcccaagacaagaacctgggc
gaacttattgagcgttttgtggcggatttccgagcacaaggcccacccaaggcaagcacg
gaggaaggtggagccgtgctgcccagctgtgctgacctctttgtctattacaagaagtgc
atggtgcagtgttcccagctgagtacgggagagcccatgatcgccctcaccaccatcttc
cagaaattcctcagagagtatgcttggaagattctgtctggcaaccttcctaaatccagc
agtaacagcggaggactgaccatcaccagtctgctgaaggaaaaagaaggctgtgaggcg
tcaaagttcaccgtagacgagctctgcttgatctgcagtattctgagtactgcagaatac
tgtctggctacaacccaacagttggaagagaagctaaaggagaaagtagataaagttctg
gtggagagaattaacttgactggggagatggatacattcagcactgtgatctccaacagc
atacagctgctagttcaagatctggatgctgcctgtgaccctgctctaactgctatgagc
aagatgccatggcagagcgtggagcacgtgggtgaccagagtccttacgtgacgtccatc
atcatgcacgtcaaacaaaatgtgccgatcatcagagacaacctcgcctccacacgcaaa
tacttcacacaattctgcatcaagttcacaaattctttcattcccaaattcatcaaccac
ctgtttcgatgtaagcctataagtatggtgggagctgagcagctcctcctcgatactcac
tccctgaagacagtcttgttggatctgccctccataggctcccaggtgctccgaaaggcg
cctgccagttacaccaagatagtggtgaagggcatgacgcgtgcagagatgatacttaag
gtggtgatggcgccacatgaaccaccagttgtgtttgttgacaactacatcaaacttctg
gctgacggcaatcctgagaccttccagaagattctggatatgaagggtctgaagcgcagt
gagcagagcagcatgctggagctcttcaggcaaaggctccccactccgcctgacgggggc
ccctctttgtccttcagcacccccacaccagagcaagaatcttctcgtatccgcaaactg
gagaaactcatcaaaaagagactttaa
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