Cololabis saira (Pacific saury): 133441730
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Entry
133441730 CDS
T09849
Symbol
limk1a
Name
(RefSeq) LIM domain kinase 1a isoform X1
KO
K05743
LIM domain kinase 1 [EC:
2.7.11.1
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
133441730 (limk1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
csai01001
]
133441730 (limk1a)
Enzymes [BR:
csai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
133441730 (limk1a)
Protein kinases [BR:
csai01001
]
Serine/threonine kinases: TKL group
LISK family [OT]
133441730 (limk1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LIM
PDZ
Kdo
PDZ_6
PDZ_2
RIO1
ABC1
PDZ_4
APH
Haspin_kinase
B2
Motif
Other DBs
NCBI-GeneID:
133441730
NCBI-ProteinID:
XP_061575306
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All DBs
Position
4:complement(27861857..27925303)
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AA seq
673 aa
AA seq
DB search
MRLMLLCCTWKDERMGEEEAGGLPVCAGCRQRIYDEQYLQALNADWHTVCFRCCECSASL
SHWYYEKDGRLFCKKDYWAKFGELCHGCNDPITTGLIMVAGEQKYHPECFTCLNCRAFIG
DGDTYALVERSKLYCGHCYYQTIVTPVSLPNSPCSRIPHTVTLVSIPASAEGNNGRKGRG
FSVAIDEPLSPTNGYSPEKSRTVRVSQVDPDCISPDVKNSIHVGDRILEINGTPIHNVPL
DEIDLLLQETSRLLQLTIEHDPHAQTQEGGSSEAEQQGDGPLSTPLSEVSSPPLPITQPP
HPDINNLRSRIITRSCSIDKSPGSSNAASPISQKKEINRSESLRVVSNRTHRIFRPSDLI
HGEVLGKGCFGQAIKVTHKETGEVMVMKELIRFDDETQRTFLKEVKVMRCLEHPNVLRFI
GVLYKDKRLNFIAEYIKGGTLREIIKKMDGNYPWNQRVSFAKDIAAGMTYLHSMNIIHRD
LNSHNCLVREDNTVVVADFGLARLMVEDKLEGKLTEGKLSGLKKPDRRKRYTVVGNPYWM
APEMIHGKSYDERVDIFSFGIMLCEIIGRVNADPDYLPRATDFGLNVSGFLEHYCPPDCP
PAFFPVAAVCCDLDADRRPAFSKLEEWLENLKMHLDIGLPLMSELDQLYKVFWEYNKIKH
PENGLHTHPEQPE
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgatgctgctctgctgcacctggaaggacgaacgcatgggagaggaggaagct
gggggtttgcctgtgtgtgcgggatgcagacagaggatctatgatgagcagtacctgcag
gccctcaacgctgactggcacacagtctgcttcaggtgctgtgagtgcagtgcgtccctg
tcccactggtattatgaaaaagatggacggcttttctgcaagaaggactactgggccaaa
tttggggagctgtgccacggctgcaacgaccctatcaccaccggcctcatcatggttgct
ggggaacagaagtatcacccagagtgcttcacctgtctcaactgcagggcgttcatcggt
gatggagacacttatgctcttgtggagagatccaaactctactgcggccactgttactac
cagaccatcgtgaccccagtgtcgctgccgaattcgccatgttcccggatccctcacacg
gtcacactggtgtccatcccggcctcagccgagggcaacaacgggcgcaaaggaagaggc
ttctcggtggccatcgacgagccgctcagcccgacaaatggctacagtcctgagaagagc
cgcaccgtcagagtctcccaagtggaccctgactgcatcagtccggatgtgaagaactct
attcatgttggagacaggatcctggaaatcaacgggacccccattcacaacgtccctctg
gatgagatcgacctgctgctccaggagacgagcaggctgttgcagctcaccatcgaacat
gaccctcatgctcagacgcaggaaggaggttcctcagaggccgaacagcagggggacgga
cccctgtccacccccctgtcagaggtgtccagtcccccactgccaatcacccaacctcca
caccctgacatcaacaacctgagatcgcggatcatcacgcggagttgcagcattgataag
tcaccaggctccagcaacgcagcatcacctatctcccaaaagaaggagatcaatcgatca
gagtcactccgagttgtctccaatcggacacaccgcatctttcggccatctgacctcatc
cacggagaagttcttgggaagggatgctttggacaggctatcaaggtcacccacaaggag
acaggggaggtgatggtgatgaaggagttaattcgctttgacgatgagacacagagaaca
ttcctcaaagaggtgaaggtgatgcgctgcctggaacaccccaatgtcctcaggttcatt
ggagtcctctacaaggacaagagactcaacttcattgcagaatacatcaaaggaggaaca
ctaagggaaatcatcaagaaaatggacggtaactatccctggaaccagcgggtcagtttt
gctaaggacatagcagctgggatgacgtatctacactccatgaacataatccaccgagac
ctgaactcacacaactgtctagtaagagaggacaacacagtggtggtggcagacttcggt
ctagctcggctcatggtggaggataagcttgagggaaagctgacggagggaaaactatcc
ggtctgaagaagcctgaccgcaggaagaggtacactgtggtgggaaacccttactggatg
gctcctgaaatgatccatgggaaaagctatgatgaaagagttgacatcttttcctttgga
atcatgctctgcgagatcattgggcgagtgaatgctgacccagactacctccccagagcg
accgacttcggactgaacgtttctggtttcctggagcactactgtccccctgactgcccc
cccgccttcttccccgtggctgctgtgtgctgtgaccttgatgcagacagaagacctgct
ttctccaaactggaggaatggctggagaatctaaagatgcacttggacatcggtctgccc
ctcatgtctgaactggaccagctatacaaggtcttctgggagtacaacaaaatcaaacac
cccgagaacggcttgcatacccaccccgagcagccggagtag
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