Cololabis saira (Pacific saury): 133441761
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Entry
133441761 CDS
T09849
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133441761 (npas1)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
133441761 (npas1)
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
133441761
NCBI-ProteinID:
XP_061575368
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Position
4:complement(30419373..30468040)
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AA seq
815 aa
AA seq
DB search
MATMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASVIRLTISYLHMRTFASQGDPPWSPLMEGDSNCKVRRSSHSLAT
DMFEQHLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPADH
VEMAERLGIRPHLRAEAGCHTAPESASSSASASSLAGTPEPAAPSSPHSSADDPTDRGFF
IRMKSTLTKRGLHVKSSGYKVRVIHVTGRIRCRPALVPGSAHSVRRPMGLVALAHTLPPS
TLNEVRMESHMFVFRVNMDLQVTYCENRISEYMDLTPAEVVGHTCYHFIYVEDLETFRQS
HEDLLRKGQVVTNYYRWLQRRGGYLWIQSTATVSINHKAPHERNVIWVNYVLSRTELPDT
PLDLLQLPESIRAERLRVSPSPTDSSPQARGSKPAKSSVGKSDSDAKGREKFSTTTGQSE
DRRKRLLRSEPEGAPPESRRRLEELRQTEEAVSASSDLGTESEGEEEEAEWDEGGDSDRL
KQEDSGGGGGGSAQSRGDAPAGGQRVGKVHNGRAVIQQLKSVVAPSPLPGNSSIKTEHEA
LSAAGHWGSHTQTSTSHTHTSQPPPSHTHTPSSSLNGDSPTTPVPDSSSSSEAPPKGLFT
PPSPALSPALSVSSPLPREERAVSGVVSRSGGGGMGNGPDFELLQRLAAGGAAGRVLFHP
LALGPQGPQSLYAPSTIRYAPPELPPSHHHGAGHGDGLQLRSDHHKGPPPAFFPHLQRLA
SLPPFSGFSPSDSPFSSGLPFCMNGLRGAAGTEED
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccatgccgtttgtcagcgaggggaagtgtgtgagcgtggagtgggatttccta
caaggtctacttgccaagcctcccaccttgccctgtctccagaacctgcgcaaagagaaa
tctcgcaatgcggctcgttctcggcgagggaaggagaatttcgagttctttgagctcgcc
aaaatgctgccactgcccggggccatcaccagccagctggacaaggcttcggtcatccgg
ctgaccatcagctacttgcacatgcgcaccttcgccagccagggggacccgccgtggagc
cctctgatggaaggagacagcaactgcaaagtcagacgatcatctcattctctggccact
gacatgtttgagcagcaccttggggctcacctcctgcagtccctagatggctttgtgttt
gtggtcagtcaggagggacggttcctctacatctcagagacagtttcaatctacctgggg
ctctcacaggtggagctgaccggcagcagcgtgtttgactacatccacccggcggatcac
gtggagatggcggagcggctgggaatccggccgcacctgcgggccgaggccggctgccac
acggcccccgagagcgcctccagctccgcgtccgcctcctccctcgccggtacccctgaa
cctgccgctccatctagtcctcattcctccgccgatgatcccacggatcgtggcttcttc
atccgcatgaagtccacgctcaccaagagaggcctgcacgtcaagtcttctggatacaag
gtaagggtgatccacgtgacggggcgaatccgctgccgcccggcgctcgtcccgggctcc
gcgcactcggtccgtcggccgatgggtctggtggcgctggcccacacgctcccgccctcc
acgctcaacgaagtccgcatggagagccacatgttcgtcttccgagtgaacatggacctg
caggtcacatactgcgagaacaggatctcggagtacatggatctgaccccagcagaggta
gtgggacatacctgttaccatttcatctacgtagaagacctggaaaccttccggcagagc
catgaggatttactgaggaaaggccaggtggtgacgaattactaccgctggctgcagagg
agaggaggctacctgtggatccagtccaccgccaccgtctccatcaaccacaaagcccca
cacgagcgcaacgtcatctgggtcaactatgtcctgagtcgaactgagctgcccgacact
cccctggatctgctgcagctgcccgaaagcataagagcggagcgacttcgagtgagccca
tccccgactgacagctccccacaggctcgaggctccaaaccagccaagagctcggtggga
aagagcgactctgacgccaaaggcagggagaaattcagcaccaccaccggccagtcggag
gacaggaggaaacgcctgctgaggtccgagcccgagggggcgcctcccgagagccgccgc
cgactggaggagctccggcagacggaggaggccgtgtcggcctcctcggacctggggacg
gagagcgaaggggaggaggaggaggccgagtgggacgaggggggagacagcgacagactg
aaacaggaagacagcggaggaggaggaggaggaagcgctcagagcagaggagacgccccg
gccggagggcagagggtggggaaggtgcacaacggccgggcggtgatccagcagctgaag
agcgtggtggccccgtcccccttgcccggcaactccagcatcaagactgaacacgaggcc
ctgagcgctgcagggcactggggatcccacacgcaaacctccacctcccacacacacacc
tctcagcccccgccgtcgcacacacacacaccttccagcagcctgaacggcgacagcccc
accacccccgtccccgactcctcttccagcagcgaggccccacccaaaggcttgttcacc
cctccctcccccgctctgtccccggccttgtcggtgtcctccccgctgccccgagaggag
cgggccgtgtcgggggtggtcagccgcagcggcggcggcggcatgggtaacggccccgac
ttcgagcttctccagagactggctgcaggcggcgcagcggggagggtcctcttccacccc
ctcgccctcggcccgcagggccctcagagcctgtacgccccgagcactatccgctacgct
ccgcctgagctgccgccctcccaccaccacggcgcgggacacggcgatggcctccagcta
cgctcggaccaccacaagggacccccaccggccttttttccgcacctacagcggctggcc
agcctgccacccttcagtggtttctccccatctgacagccccttctcctccggcctgcct
ttctgtatgaatggactgaggggggctgcaggcacggaggaggactga
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