Cololabis saira (Pacific saury): 133441825
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Entry
133441825 CDS
T09849
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133441825 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133441825 (dhx36)
03012 Translation factors [BR:
csai03012
]
133441825 (dhx36)
Enzymes [BR:
csai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
133441825 (dhx36)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
133441825 (dhx36)
Translation factors [BR:
csai03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
133441825 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
NB-ARC
NPHP3_N
AAA_16
Motif
Other DBs
NCBI-GeneID:
133441825
NCBI-ProteinID:
XP_061575477
LinkDB
All DBs
Position
4:complement(32881070..32916204)
Genome browser
AA seq
1033 aa
AA seq
DB search
MDRGGGRGSRGPDQDQDQDRGGGGGGGGGGQMERPPPHLRGREIGMWYARYGAVRRKQAD
RRSRAVVGMDEAREQHITKLLNSVQNDQPGPRRDSRDARASTSENWQSAASNSGHCYFDG
DKAEEEKIEEEAQTKGGQTSQRDLSTRAVKDEPPDSWDEGQEQEDQKQMLSEDKDLEFLF
QDVVRDGSQDDCLKRDLLNKKSDTKYKEMLKFREKLPSYNKREELVKLINSNRVLVVSGE
TGCGKTTQVTQFILDDHINRGMGSMCRVVCTQPRRISAISVAERVAAERAESVGNGNSCG
YQIRLQSRLPRRQGSILYCTTGIILQWLRSDPLLSSISHLVLDEIHERNLQSDVLLIIVK
ELLQLRDDLKIVLMSATLNAEKFSKYFANCPVIHIPGLTFPVEEFLLEDILEMTRYRPRN
QDRRPAWKRGFWQGRQSRSEKEEKEAEYKESWPSYARTLQGRYSDGTIEALEMLDSDEKI
DLELILALIRYIVLSEEEGAILVFLPGWDNISTLNDLLMAQQMFKSDRFVIIPLHSLMPT
VNQTQVFKRPPPGVRKIVIATNIAETSITIDDVIYVIDGGKIKETNFDTNNNISTMTAEW
VSLANAKQRKGRAGRVCPGKCYHLYNGLRASLLEAYQLPEIMRTPLEELCLQIKILKLGS
ISRFLEKALDPPTEKAVHLAIKNLTDLNALDHSENLTALGFHLARLPVEPHIGKLILFGA
LLGCLDPVLTIAASLSFKDPFFIPLGKEKMADMRRRVLSRNSKSDHLTIVNAFQGWEEAK
QRGARFERDFCWDNFLSANTLQMLRNMKSQFAEHLVHAGFVSSKDPKDSKSNVNSDNEKL
IKAVIVAGLYPKVAMIRPSHSKKRPGVKVYTQADGKVCIHPKSVNAEEKEFNYTWLIYHL
KMKTSSIFLYDCTEVSPFSLLFFGGDITIQKDGDQETIAVDQWIVFSSPARIAYLVKSLK
KELDSLLEEKINNPAPVDWNNRQSKDCAVITAIIDLITTQEKPGGSSKDSSRAWASAPRG
QHSHFDDDDDDND
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggaccggggaggtggcaggggctccagaggacccgaccaggaccaggaccaggaccga
ggaggaggaggaggaggaggaggaggggggcagatggagcgccctccgccgcatctgcgg
ggccgtgagatcggcatgtggtacgctcggtacggagccgtgcggaggaaacaagcggac
cgcagatcgcgggcggtggtcgggatggatgaagctcgagagcagcacattaccaagctg
ctcaactctgtccagaatgaccagcctggcccaaggagagacagcagggatgcaagagcc
tctacatctgaaaactggcagtccgctgccagtaatagtggtcactgttactttgacggg
gataaagctgaagaagaaaaaatcgaagaagaagcccagaccaaaggaggtcaaacatcc
caacgtgacctctccacaagagcagttaaagatgagcctccagatagttgggatgaaggt
caggaacaggaagaccaaaagcaaatgctaagtgaagacaaggatctggagttcttgttt
caagacgtagtcagagacgggtcacaggatgattgcttgaaaagagatctgcttaacaag
aaatcagacacaaagtacaaagaaatgctgaaattcagagaaaaactgccatcctacaac
aaaagagaggagctggtgaagctgatcaactcaaaccgtgttctggtggtgagtggagag
actgggtgtggaaagaccacccaggtcacccagttcatccttgatgaccacatcaacagg
gggatggggtccatgtgccgcgtggtctgcacgcagcctcgtcgcatcagtgccatctcg
gtagcagagcgtgtagctgctgagagggcagaaagtgtgggaaatggaaattcatgtggt
taccaaatccgcctgcagagccggttaccacggagacaaggttcgatcctgtactgcaca
accggcattattcttcagtggcttcgctcggatccgttgctgtctagtatcagtcacctg
gtgttagacgagattcacgagcggaacctccagtctgacgtcttgctcatcatcgtgaag
gagttactccaactccgagatgacctcaaaattgtcctcatgagtgccacactcaacgcg
gagaagttttctaaatattttgcaaattgtccagtgatccacatccctggtctgacgttc
ccagtggaggagttcctccttgaagacattttagagatgaccaggtatcgtcctcgtaat
caggaccgccgacccgcatggaagagaggcttctggcagggtcgtcagtccagatctgag
aaggaagaaaaagaggctgaatacaaggaaagctggcccagttatgcacgcacactgcag
ggcagatattctgacggcacaattgaggccctggagatgttagacagtgatgagaagatt
gatctggaactgatcctggctctaatccgttacattgtactcagtgaagaggaaggtgca
atcttggtcttcctgccaggttgggacaacatcagcactctgaatgacctgctcatggct
cagcagatgttcaaatcagacaggtttgttatcatccctctgcactccctaatgcccacc
gttaatcagacacaggtgttcaaaagacctcccccgggagtcagaaagattgtgatcgcc
accaatatagctgagaccagcatcaccatagatgacgtcatctatgtgatagacggaggc
aagattaaggagaccaacttcgacaccaacaacaacatcagcacgatgacggcggagtgg
gttagtttggccaacgccaaacagaggaaagggcgcgctggcagagtgtgtccaggaaag
tgctatcatctgtacaatgggctcagggccagcctgttggaggcctatcaattacctgaa
attatgaggacgccgctagaagagctctgcttgcaaataaagatattgaagcttgggtca
ataagtcgattcctggagaaggcactggaccctcccactgagaaggccgtccacctcgcc
atcaagaacctcacagacctgaacgccctggaccattcagagaatctcacagcgctcggt
ttccacctggctcgcctgcccgtggagcctcacatcggcaaactcatcctgttcggagcc
ctgctgggatgcctggaccctgtactgaccatcgctgcttctctcagcttcaaagaccct
ttcttcataccactgggtaaagagaagatggcagacatgaggagaagggtcttgtccagg
aactccaagagcgaccacctcactattgtcaatgctttccagggctgggaagaagccaag
cagcgcggcgccaggtttgagagagacttctgctgggacaacttcttgtctgccaacact
ctccagatgttacgcaacatgaagagtcagtttgctgaacatctcgtgcacgcagggttt
gttagcagcaaagatcccaaagactccaaatccaatgttaactcggacaatgagaagtta
atcaaagcggtgattgtggccgggctgtaccctaaagtggccatgatcagaccgagtcac
agcaagaagaggccaggggtgaaggtgtatacgcaggccgacgggaaggtgtgtatccat
cccaaatctgtcaacgctgaagagaaggagttcaactacacatggctcatttaccacctg
aagatgaagacgagcagcatcttcctgtacgactgcactgaagtgtccccgttctcgctg
ctgttcttcggcggagacatcaccatccagaaagacggggaccaggagaccatcgcggtg
gaccagtggatcgtcttcagctccccagcacgcatcgcttaccttgtgaagagtttaaag
aaggagctggactccctgctagaggagaagatcaacaatccagctcctgtggactggaac
aaccgccagtccaaagactgtgccgtcatcacagccatcatagacctcataaccacccag
gagaagcccggaggcagcagcaaggactccagcagggcgtgggcgtctgccccgagagga
cagcacagtcacttcgatgacgatgacgacgacaatgactag
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