Cololabis saira (Pacific saury): 133441833
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Entry
133441833 CDS
T09849
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csai03021
]
133441833
Transcription machinery [BR:
csai03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
133441833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
133441833
NCBI-ProteinID:
XP_061575494
LinkDB
All DBs
Position
4:33464871..33487068
Genome browser
AA seq
2114 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWRRFVWQGPTSSPILFPVTEEDPILCSFSRC
LSADVLSVWRRHHTPGRRELWLFWWGDDPSFAELIHNELSSEEDGEWESGLSYECRTLLF
KAIHNLLERCLMNRGFVRIGKWFVKPYQKEEKIINKSEHLSCAFTFFVHGDSNVCTSVEI
AQHQPLQRLSEEHLSLAQQSSSPMQVILSPYGLNGTLTGQAFKMSDHPTQKLIEEWRQFY
PICPNRKEVPEDKMEDTDWEDDSLAAVEVLVAGVRMVYPSCLVLLPLLDLPAVVPQGSAN
TPGSQCGPQQGQAPHKDPAMSSVTLTPPTSPEEAHTDYQPAQRWLKLSSATDYYNSNNTL
HGGKIPRRLARQMVECVWQEYNINRTGNKRKFTTLTNGACEEESDKLGLWDFVEPTYRPS
CNCSRHKNLKQRSSSTSGHPPSSGQPAQPAPKHKLSEKMEKGEKQQRRPQTPFHHRNSVS
EEQSLEPQTPRLCPRPQEEGSYPNLHHVDTAPPKAPTLHAHGPPADLVGSPPPPPLSPHP
CDHVESDMTPGTMKNCSTPIHQPFYPPSVEPCLMPQKGSSGEPPLENVSMPLPFPPTYND
TLEPTVFVGSAINPTEDSTHNPWRYFNLPRKKDSNYLTPQLPVDKIRDDYGGGTESVVSV
TELMCDSSHPLKVSQELTRTYAQRRNSHLVSTAGDGEHSEEPDPYAFVEGDEEFSFTEKR
DKAGGEKDGSKKHKLDEGSGTSADDGPSGSKPSCSTSLIHENDLAVSYSDLDKIFNSDED
ELAPGTKKTGIGTEEKFGSKETKPASLDSLSCISSADLHQMFPTPPSLEQQGYSPMNSGS
KDSLETGAGLLDGSQLNSHFKMEVEEGFCSPKPSEIKDFSFVYKPETCQSFIGCSMYAPL
KMLPSHCLLPIKVPEDCVYTPSWTMGKMELIPTVSSVSLLTKDSNVPSVEPDYNQTYTPQ
THTPFLSSSAPPSNSGTGILPSPATPRFSVPTPRTPRTPRTPRGPSSVQGSVKYDNSDLY
SPASTPSTCRPLSSVEPATVPFIPEAHSLYVTLILSESVMNLYKDCNFDSCCVCVCNMNI
RGADVGVYLKDNGEAQYPCTCGFSAVTNRRFGQSAGLFLEDELDVVGRGSDASRDTERCF
EELRASTPHKAASLKDKAPDELILLLQDQCTNPFAQMAGVEYCKPRSAPSSFLRVEERDC
YNDCYMALEHGRQFMDNMSGGKVDETLVKSTCLHQWPKCKTADMNKLYSQDVLRVLLSLQ
PVLQDTIQKKRSVRSWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLVGYEYDFVV
LSPFGLPYWEKLLLDPYGSHRDVGYVVLCPDIEALLRGAKTFFKDLSAMYEACQLGQHRP
ISKSHPEGILTVGTTEGRSMTEQPLSDWFLSLAAREGNNETFNKLKLFAQVCRYDLAPYL
SEQPLDSSLLSQRSPPPPPAASSSSSSSSISSGLQSTNTTSTSSAPPVQANSTPSSSSLG
PQTIGGVASGKPSSYSPFGTAGLQGSATQNGPQSNSQGGGGLAENGSNQPPAPTETPEST
MERDKVGKPTDGESHAVSYPPAIVVYIIDPFSYEDAEREVHSSSYTLGLMRCYMEMLPFL
PAHIRNAVSVQIVPCQYLLQPVHSGERRVYGQHLKSLAFSVYTQCRRPLPNSTNFKALTG
FGPGLAIDMALKNPERPECLRLYTPPFILAPVKDKQTELGETFGEASQKYNVLFVGYCLS
HDQRWLLASCTDQHGELLETCIISIDVPNRARRKKGSVRRLGLQKLWEWCLGLVQLTSLP
WRVVIGRLGRMGHGELRDWSILLSRRNLQSVSKRLKETCRMCGISAADTPSILSACLVAM
EPQGSFVIMPDSVSTGSVFGRSTTLNMQTSQLSTPQDTSCTHILVFPTSAMVQVNTNTSE
PIDFNPINPDGSDGMGIFDFFGNDMDHDMVDPDLINILPNSPTTSPVHSPGSHYHQGGDG
SKGQSADRMESHEEALNILQQPMALGYFISTAKAGPLPDWFWSACPQARNQCPLFLKASL
HLHVSSVQSDELLHSKHSHPLDSNHTSDVLRFVLEQYNALSWLTCDPATQDRRSCLPVHF
VVLTQMYNFIMNML
NT seq
6345 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgtgctttgtaccaaacggggccagcttggaggactgccactccaacctcttc
tgcttggctgatttgactggaataaaatggaggcgttttgtgtggcaagggcccacttca
tcgcccatccttttcccagtgacagaggaggacccaatcttgtgtagtttcagccgatgc
ctgtcggcagatgtgctgagtgtgtggagacggcaccacaccccgggtcggagggagctc
tggcttttctggtggggggatgaccccagtttcgctgagcttatccacaatgagctctca
agtgaggaggatggagagtgggaaagtggcctgtcctacgagtgtcgaacgctgctgttc
aaagccattcacaacctgctggaacgttgtctcatgaaccgcggcttcgttcgcattggc
aagtggtttgtcaagccataccaaaaggaggagaagatcattaataaaagcgaacacctt
tcctgtgcgttcaccttcttcgtccatggcgatagcaacgtgtgcacgagtgtggagatc
gctcagcatcagcctcttcaaagactgagcgaggagcatcttagcctcgcacagcagagc
tccagcccgatgcaagttatcctgagcccatatggcttgaatgggaccctcactggccag
gcttttaagatgtcggatcaccctacccagaagctcatagaagagtggaggcagttttat
cccatttgccccaatcggaaggaggtcccggaggacaagatggaagatacagactgggag
gatgactccctggccgctgtggaagtccttgttgcgggagtaaggatggtttacccttcc
tgcctggtgcttctccccctgttggatcttcctgctgtggtacctcaaggctcagcaaac
accccaggaagtcagtgtggtcctcagcagggccaggcacctcacaaagaccctgccatg
tcctccgtcaccctgactcctccaacatcaccggaggaggcacacactgactatcagcct
gcccagaggtggttaaagctgtcctccgcaactgattactacaactctaacaacactctt
cacggaggcaaaatccctcgcaggctagctagacagatggtggagtgtgtgtggcaagag
tacaacataaaccgtacagggaacaagaggaagtttacaaccttgacgaatggagcctgt
gaagaagagtcggacaaactgggactctgggattttgtggaaccaacttacagaccatct
tgcaactgctccagacataagaatttgaagcagcgatccagcagtacctcagggcaccca
ccttcatcggggcagcctgcccagccggctcccaagcacaagctgagcgagaagatggag
aagggggaaaagcagcagaggaggccacagacaccttttcatcaccgcaactctgtgagc
gaggagcagtcgctggagccacagaccccgaggctctgcccgagaccacaggaggagggc
tcgtatccaaacctgcaccacgtagacaccgcgccgcccaaagcccctacgctgcacgcg
cacggcccacccgccgacctcgtcggctccccgcctccaccacctctcagcccgcatccc
tgcgatcacgtagaaagcgacatgacgccaggaaccatgaagaactgttccacgcccatc
caccaaccgttctacccaccatcagttgagccttgcctgatgcctcaaaaaggctcatct
ggagaacctccgctggagaacgtgtcgatgcctttgcccttccctccaacgtacaatgac
actttggaacccaccgtgtttgtaggttcagctataaaccccaccgaagactccactcac
aacccctggaggtatttcaacttacccaggaagaaggactccaactatctgacaccgcag
ttacccgtggataaaatacgagatgattacggaggagggacagagagtgtcgtctctgtc
acagagttgatgtgcgactcctcgcatcccctgaaggtctcgcaggagctgacgaggacc
tacgcccagcggagaaacagccatctcgtctccacagcaggagacggagaacacagcgag
gagccagacccatatgcctttgtggaaggagacgaggagttcagcttcactgagaagagg
gacaaggctggaggcgagaaggacggcagcaagaaacacaagttggatgaagggagtgga
acctctgcagatgatggtccatcggggagtaaaccgtcgtgctctaccagcctcatccac
gagaacgacttggctgtgtcgtacagtgatctagataaaatcttcaactcggatgaagat
gagttggctcctggaaccaaaaaaactggaattggtacagaggagaaatttggcagtaaa
gaaacgaaaccagcctcgctggattctctctcttgcataagctcagcagacctacaccag
atgtttcccactccgccttccctggaacagcagggctactcccccatgaactccggaagc
aaggatagcctggaaacgggggcgggcctgttggacggcagccaacttaacagccacttc
aagatggaggtggaggagggtttctgcagcccgaagccatctgaaatcaaggacttctcc
tttgtgtacaagccagagacgtgtcagtctttcattggctgctctatgtacgctcccctc
aagatgctacctagccattgtttgttgcctatcaaagtgccagaagactgcgtgtacacg
ccgagctggaccatgggcaaaatggagctgatccccaccgtgtcgagtgtcagtctcctc
accaaagacagtaacgtcccaagtgtggagccggactacaaccagacctacacccctcag
acccacacgcccttcttatccagcagtgctcctcccagcaacagcggcaccggcatcctg
ccttccccagccacgccccgattctccgtgcccacgccccgcactccacggactccacgc
actccccgcggcccatccagcgtccagggttccgtcaagtacgacaattccgacctctac
tctccagcgtccacgccatccacctgtcgacccctcagctccgtggagccggccaccgtg
cccttcatccccgaggcgcacagtctctacgtcaccctcatcctctccgagtcggttatg
aacctctacaaggattgcaacttcgacagctgctgcgtgtgcgtctgcaacatgaacatc
cgaggggcggacgtaggcgtgtacctcaaagacaacggcgaggcccagtatccttgcacg
tgcggcttcagcgccgtcaccaaccggcgcttcggccagtcggcggggctgtttctggag
gacgagctggacgtcgtgggccgcggttcagatgccagtcgagacacggagcggtgcttc
gaggagctgagagcttccacgccacacaaggcggccagcttgaaggacaaggctccggac
gagctgatcctgctgctacaggatcagtgcacgaacccatttgctcaaatggcaggtgtg
gagtactgcaagcccaggtcagcccccagttcattcctgagggtggaagagcgagactgt
tataacgactgctacatggccctggagcacggccggcagttcatggacaatatgtcagga
gggaaagtagatgaaacactagtgaaaagcacctgtcttcatcagtggccaaaatgcaaa
actgcagacatgaacaagttatactctcaggacgtcctgcgggtgttgttgtccctgcag
cctgtgctgcaggacaccattcagaagaagaggagtgttcgctcctggggcgttcaggga
ccactgacctggcagcagttccataaaatggctggcaggggatcatatggtacagatgag
tctcctgagcccctgcccatcccgacctttctggtcggctatgagtatgattttgtggta
ctgtctcctttcgggttgccctattgggagaagcttctcctggatccttacggttcccac
agagatgtgggatatgtcgtcctctgcccagatattgaggcactgcttcgtggggccaaa
acctttttcaaagatctgagtgccatgtatgaggcatgccagctggggcagcacaggccc
atctccaagagtcacccagagggtatattaacagtcggcaccacagaaggcaggagcatg
acggagcagccccttagcgactggttcctcagcttggccgccagagaaggaaacaatgaa
acctttaataagctcaaactctttgctcaagtgtgccgttacgatttagctccgtacctg
tcagagcagcctttggatagctctctgttgtcccagcgcagtcctcctcctcctccggcc
gcctcctcttcctccagctcttccagcatctcctcaggactccagagtaccaacactaca
agcaccagctctgccccgcccgtacaggccaacagcaccccttcctcctcctctttaggc
ccccagactatcgggggagtggcctcgggcaagccaagctcctactcaccattcgggaca
gcaggcttgcagggcagcgccactcagaacgggcctcagtcaaactcgcaaggcggaggg
ggtctggcagaaaacggatccaaccagcctccagcgcctacagaaactccggagagcaca
atggagagagacaaagtgggcaagccaacagacggagagtcccacgctgtttcttacccg
cctgccatagtggtttacatcatcgacccgttcagctatgaagacgcagaaagagaggtc
cactccagcagctacaccctgggcctgatgcgctgctacatggagatgctcccgttccta
cccgctcacatcaggaacgctgtctccgtgcagatcgttccctgccagtatctgctgcag
ccggtccacagcggcgagcgccgcgtctacggtcagcacctgaaatcgctggccttctct
gtttacactcagtgccgtcgacctctccccaactccaccaacttcaaggctctgacgggc
tttgggcccgggcttgccatcgacatggcccttaagaacccagagcggccagaatgtctg
cgtctgtacacgccgcccttcattttggctccggtgaaagacaagcagacggagctgggg
gagacgttcggggaagcatcgcagaagtacaacgtcctgtttgtgggctactgtctgtct
cacgaccagcgctggctgctggcttcctgcaccgaccagcacggagagctgctggagact
tgcatcatcagtatcgatgtacccaacagggctcgcaggaaaaagggctcagtgagacgc
ctgggtttgcagaagctctgggagtggtgtctgggcctggttcagttgacctcactgcca
tggagagttgtgataggacgtctgggcaggatgggccatggcgagctgagagactggagt
attctgctgagtagaagaaacttgcagtccgtcagcaaacgcctgaaggagacgtgtagg
atgtgcggcatctccgctgccgacacgcccagcatcctcagcgcctgtctggttgccatg
gaaccgcagggttcattcgtcatcatgccagactccgtctccacaggctcggtgttcggc
cgcagcaccacactcaacatgcaaacatcgcagctgagcacacctcaggacacatcctgc
acacacatcctggtgttccccacctcagccatggtccaggtcaacactaacacctcagag
cccatcgacttcaaccccatcaatcctgacggctctgatggcatgggcatcttcgacttc
tttggcaatgacatggatcatgacatggtggatccagacctcatcaacatcctgcccaac
tcccccacaacctcccccgttcactctccgggctcgcactaccatcagggaggagatgga
agcaaggggcagagtgcagatcgtatggagtcccacgaggaggctctgaacatcctgcag
cagccgatggctttgggttacttcatctctacagcgaaggctggaccgctgcccgactgg
ttctggtctgcttgtcctcaagcccggaaccagtgcccactcttcctcaaggcctccctg
cacctgcacgtgtcttctgtccagtcagatgagctcctgcatagtaaacactcccacccc
ctggactctaaccacacctctgatgtgctcagatttgttttagagcaatacaacgccctc
tcctggctcacgtgcgaccctgccacccaggaccgacgctcctgtctgcctgttcacttt
gtggtgctcacacagatgtacaactttatcatgaacatgctttga
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integrated database retrieval system
