KEGG   Cololabis saira (Pacific saury): 133441907
Entry
133441907         CDS       T09849                                 
Symbol
robo1
Name
(RefSeq) roundabout homolog 1 isoform X1
  KO
K06753  roundabout, axon guidance receptor 1
Organism
csai  Cololabis saira (Pacific saury)
Pathway
csai04517  IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:csai00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    133441907 (robo1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:csai04515]
    133441907 (robo1)
Cell adhesion molecules [BR:csai04515]
 Immunoglobulin superfamily
  ROBO family
   133441907 (robo1)
SSDB
Motif
Pfam: I-set Ig_3 Ig_2 ig fn3 V-set C2-set_2 Pur_ac_phosph_N FN3_DSCAM-DSCAML_C Ig_PDGFR_d4 Unc5_NetrinR_N
Other DBs
NCBI-GeneID: 133441907
NCBI-ProteinID: XP_061575641
LinkDB
Position
4:37089476..37319402
AA seq 1710 aa
MRAPEAGMAGGRMPLLLLVLLVEVLSGACVPGEGSGKHKGSWRWKGDRSKTGVAHDGASD
GATAAPTSEHEDDNTLGYTGSRLRQEDTPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPT
VEWYKDGERVETDKDNPRSQRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAVS
HNASLEVALLRDDFRQNPADVIVAAGEPAVLECQPPRGHPEPTISWKKDGINIDDRDERI
TRRGGKLMITNARKSDAGKYVCVGTNMVGERESEIAELTVLERPSFVRRPGSQVMLVDQS
VEYRCEARGDPVPTVRWRKDDGELPKGRYEIREDHTLKIRRLISADVGSYTCVAENMVGK
AEASATLTVHVPPAFAVRPRNQVVGVGRTVTFQCEATGNPQPAIFWQREGSQNLLFSSQP
PQPSSRFSVSQTGDLTITDAERSDVGYYSCQALNIAGSVITKALLEVTDVVSDRPPPVIR
QGPTNQTVAVDGTVVLNCVTSGNPTPTILWRKDGVLVSTHDSRVKLLDTGALQIRYAKLS
DTGIYTCIASTPSGEASWKAFLEVQEFGNPVQPNRPTDPNLIPSAPSKPEVTDVTRTAVT
LSWKPNLNAGATPTSYIIEAFSHASGSSWQTLAEHVKTESFVLKGLRPSAVYLFLVRAAN
AYGLSDPSPITDAVKIQDVPPTSQGVDHRQIQRELGDVVVHLHNPTILSSSSVRVQWTAE
QQSPYIQGYKVMYRPSPEGHQRSEWAVFEVRTPGEDSALVTQLRKGVTYEFKVRPFFNEF
QGADSDVKIGKTLEEAPSAPPRKVSVTESGDNGTAIVVSWQPPPEEQQNGVVQEYKVWCL
GNESRYHINRTVDGSTLSVLIPSLAPGIRYSVEVAASTGAGPGVKSDITFFQLDSSGRMT
DSPDGENPLSQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLSSSYAGIRK
VPSFTFTPTVAYQRGGEGVSSAGRPGLLNIGESATQPWLADTWPNSCSNHNDCSINCCTA
GNGNSDSNLATYSRPADCIANYNNQMENKQTNLMVPESGVYGDVDLSNKINEMKTFNSPN
LKDGRFVGPGGQPTPYATTQLIQSSIMGNNINSERGTGGSGGGLGGGGEVNEKHCWKPTS
VQQQKQELSSQLQYNIMEQNKLNKDRYRGGDSPMPATIPYNQTHDSHTGGSYNSSDRGSS
STSGSQGHKKGTRTPKLPKQSTMNWADLLPPPPANPPPSRSTEEYSLSMEDSCDPDMQCS
MPPSHMYLQPDELEEEEEMERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEEMQPMLQ
DPSNSHERRRHPMSPPPPPRPISPSHTYGYISSPLALDTDGMEEEDILEEEEDGDDTDAE
VAKMHYHHTHPHTHPHHPQMHARRLLLRGLEQTPASSMGDLESSVTGSMINGWGSASEED
NVSSGRSSAVSSSDGSFFTDADFAQAVAAAAEYSGLRVAKYPNSQGQEVGGASARKYQIN
QSGHRPSSPVSTDSNMSMAAIHRRPPKKLKQHPAAAHPGNQRREAFSEDLPPPPIPPPAV
LKSPTHPSKTALEGRGVISPKAAEGRDKRGGGMGGYRPQEASDARTSSSERRDAQERQKT
APAVKGSKHENSSANKPRQHPGSEDILPYSRPQFPTVNSTRDPSSSSSMSSKGSGGRRRG
EGGRRNPADMGLNSSAAFQPEDDELEMAES
NT seq 5133 nt   +upstreamnt  +downstreamnt
atgcgagcgccggaggcgggcatggccggcgggcggatgcccctgctcttgctggtgttg
ctggtggaggtgctgagtggagcctgtgtgccaggcgaaggctcagggaagcacaaggga
agctggaggtggaaaggtgacaggagcaagacgggagtcgctcatgatggtgccagcgac
ggggcaacagcagctcccacctccgaacatgaagatgacaacactttgggctacacagga
tctcgtctgcgccaagaggacaccccacccaggattgtagagcacccatcggacctgata
gtttccaaaggggagcccgccactctcaactgcaaagcggaagggcggccaaccccgact
gtggagtggtacaaggatggagaacgggtggaaacggacaaggacaatccccgctctcag
cgtatgctgctacccagcggctccctcttcttcctccgcattgtccacggacggcggagc
aaacccgatgaaggatcctacgtctgtgtcgctcgcaactacctgggagaggcagtgagc
cacaatgcctcgctggaagtagcccttcttcgtgacgacttcagacaaaaccctgcagat
gtgatcgtggcagctggagagcccgcagtcctggagtgccagcctcctcgcggacacccc
gaacccaccatatcctggaaaaaagatggcatcaatattgatgacagagatgaaaggatc
actagacgcggagggaagctgatgatcacaaatgcccgcaaaagcgacgctgggaagtac
gtctgtgtcggcacgaatatggttggagaacgtgaaagtgaaatagctgaactgacagtg
ctggaacgtcccagcttcgtgcgtcgccccggcagccaggtgatgttagtggaccaaagc
gtggagtacagatgtgaagcccgaggtgacccagttcccaccgtacgctggaggaaagat
gacggtgaactgcccaaaggaagatatgagatccgcgaggaccacaccctgaagatccgt
cgcctgatctcggcggacgtaggctcctacacctgcgtggccgaaaacatggtgggcaaa
gcggaggcatcggccacgctcaccgtccacgtgccccctgcgtttgcggttagaccaaga
aaccaggtggttggagttggcaggaccgtcaccttccagtgcgaggccactggaaaccca
caaccagccattttctggcaacgggaaggcagtcagaacctgctgttctcctcccaaccg
cctcaaccctccagccggttctccgtgtctcagaccggagacctgaccatcaccgatgcc
gagcgctcagacgtgggatactacagctgccaggccctcaacatcgctggaagcgtgatc
accaaagctctgctagaggtcactgacgtcgtttcggaccgcccgccaccggtaatacga
cagggtccgaccaatcagacggtggctgtggacggtactgtggtgctgaactgtgtgaca
tctggtaaccccacccccaccatcctgtggaggaaggacggtgtgttggtctccacacac
gactccagggtcaaactgttggacacaggtgcactgcagatacgctacgcaaagcttagt
gatacgggcatatacacctgcatagcctccacaccgagtggagaggcctcgtggaaagcc
tttctggaagtccaagaatttggaaacccagttcaaccaaacaggcctaccgacccaaac
ctgatccccagtgctccctccaagcccgaggttacggacgtcacccgcaccgccgtcact
ctctcatggaagcccaacctcaacgctggagccacacccacctcctacatcatcgaggcc
ttcagtcacgcatcggggagcagctggcagaccttggcagagcatgtgaaaacagagtca
ttcgtgctgaagggcctgaggcccagtgcagtctacctcttcctggtgcgagcagctaat
gcctacgggctgagtgatcccagtcccatcactgatgctgtgaaaatacaagatgtccct
cccaccagtcagggtgtggaccatcgtcagatccaaagggagttgggagacgtggtcgtc
cacctgcataaccccaccatcctttcctcctcgtctgttcgggtgcagtggacggcggag
cagcagtccccgtacatccagggctacaaggtgatgtacaggccctccccagagggacac
cagaggagcgagtgggctgtgtttgaggtgcggacccccggggaggacagcgccctcgtc
acgcagcttcggaagggcgtcacctacgaattcaaagtccgccccttcttcaacgagttc
cagggagcagacagcgacgtcaaaatcggaaagacgctggaggaagcccccagtgcccct
cctcggaaggtctcagtgacagagagtggagacaatgggactgccatcgtcgtctcctgg
caaccccctccagaggagcagcagaacggggtggtccaagagtacaaggtttggtgcctg
ggtaatgagagcaggtaccacatcaaccgaacagttgatggctcgaccctatccgtgctg
attcccagcctggcccccgggatccgctacagcgtggaggtagcagccagcacaggagca
gggcccggagtcaagagcgacatcaccttcttccagcttgattcgtctggacgaatgaca
gactccccggacggagaaaacccactgtcccagcagatctccgacgtagtaaagcagccg
gccttcatcgccggcatcggcgctgcttgctggatcatcctcatggtcttcagtatctgg
ttgtatcggcaccggaagaaaaggaacggcctgtccagcagctatgcaggtatacgcaaa
gtgccatctttcactttcaccccaacagttgcttatcagagaggtggggaaggcgtcagc
agtgctggaaggcccggtttgctaaacatcggagaatctgccactcagccctggctcgcc
gacacgtggcccaactcctgctccaaccacaacgactgcagcatcaactgctgcactgca
ggcaacggaaacagcgacagcaacttggcaacgtacagccgcccagccgactgtatcgcc
aattataacaaccagatggaaaacaaacagaccaacctcatggttcccgagtcgggagtt
tatggagatgtagacctgtccaacaagatcaatgagatgaagaccttcaacagcccgaac
cttaaagacggccgctttgtaggtccggggggccagcccacgccttacgccaccacccag
ctcatccagtcctccatcatgggcaacaacataaactcagagcgagggaccggagggagt
ggcggcggacttgggggtggaggggaagtgaatgagaaacactgctggaagcccacctcg
gtgcagcagcagaaacaagaactgagctcccagctgcagtacaacatcatggagcaaaac
aagctaaacaaggaccgctacagaggaggggacagtcccatgccggccaccatcccctac
aaccagactcacgacagccacaccgggggctcgtacaacagctctgaccgaggcagcagc
agcacctctggtagtcagggtcataagaaaggaacacgcacccccaaattacccaaacaa
agcacaatgaattgggctgaccttctgccccctcctccggcaaacccacccccaagtcga
agcacagaggagtactctctatcgatggaagacagctgtgatccagacatgcagtgctcc
atgcctccctctcacatgtacctgcagcctgatgagctggaggaggaagaggagatggag
agggggcccactcctcctgtccgcggggcagcctcttcccctgctgcagtatcctacagt
caccagtccacagctacacttaccccttcaccccaggaggagatgcagccgatgctgcag
gatccatcaaacagccatgaacggagacgccatcctatgagccccccaccccctccaaga
cccatctccccctcacacacatatgggtacatcagcagcccactagccttggacactgac
ggtatggaggaggaggatatactagaggaggaggaggacggtgatgacacagatgcagaa
gtggccaagatgcactaccaccacacccatccccacacacaccctcaccacccccagatg
catgcacgaaggctgctgctacgagggcttgaacagacgcctgcctccagcatgggggac
ttggagagctcagttactggctccatgatcaacggatggggctcggcctccgaggaggac
aatgtttcttcagggaggtccagcgcagtcagctcatcggatggatccttcttcacagat
gccgactttgcccaagccgtcgccgccgctgcagagtattcaggcctcagagtggcaaaa
taccccaactcacagggccaggaagtgggaggagcttcagcacgaaaataccaaataaac
cagtcgggtcaccgtccaagcagcccggtgtctacagacagtaatatgagtatggcagct
atacacaggaggcctccgaaaaagctaaaacagcaccctgcagcagctcacccgggaaac
cagcgacgtgaagccttcagcgaagatctccctccaccacccattccacccccagcagtg
ctcaagtctcccacacatccctccaagacagctttagagggtcggggagtcatttctccc
aaggcagcggaaggtcgagacaagcgaggaggaggaatgggcggctatcggccccaggag
gcctcagatgccagaaccagctcatctgaacgcagagacgcccaggagagacaaaagact
gccccggcagtgaaagggagtaaacatgagaatagcagtgccaacaagccacgtcagcac
ccaggctcagaggacattctgccctacagccgaccacagttccccacagtcaacagcacc
cgcgacccaagctcctccagttccatgtcctccaagggttcagggggccggcggagaggg
gaaggaggccgcaggaaccctgcagacatgggccttaacagctctgcagccttccaacca
gaagatgacgaactagagatggcagaaagctga

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