Cololabis saira (Pacific saury): 133441924
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Entry
133441924 CDS
T09849
Symbol
frem2b
Name
(RefSeq) FRAS1-related extracellular matrix protein 2b
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133441924 (frem2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
csai04091
]
133441924 (frem2b)
Lectins [BR:
csai04091
]
C-Type lectins
Lecticans
133441924 (frem2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Big_9
DUF6522
Motif
Other DBs
NCBI-GeneID:
133441924
NCBI-ProteinID:
XP_061575696
LinkDB
All DBs
Position
4:38672531..38734749
Genome browser
AA seq
3114 aa
AA seq
DB search
MAWIASSHLRGSGAAFILFALILTGDAVAQGFDSYGLSYALRSELSEDTILVANNGIRVP
FGRSVFIDPVNDLVIQVQPGDRCSITVLDNDPLSQRPGLLSPKKFPCEFGPNDVKYSHFG
SRSPPRDRVRLQLRYDTQTDTIIIPFMMEVEVVFTQLEVLTKNMPLIVEKLLGTSNPIDK
RILEFTYDRGAQQCRVVSLSRGSALPRYGKLVDEDGLGAMLDCDQFIEMNTRYQHTFALK
SPNRDYVPMLVELHDQEGNLLKQEFFQILVRIKDGEDNTQPKPSFVAMMMMEVDQFVMTA
ITVDMLAAEDLESNPDELIFNITSPLSFEEGYIVSTDDRNLPITSFYQGDLKELKIAYKP
PAVDSDTERIFQIEFEVVDTEGAVSDPFAFMIVVKPMNTLAPVVTRNTGQLLYEGQSRPL
SSSENLEISDEDNLDKVQISVIDGLRHGDLTVLGSTRKFFTPTDLDAGVVIYQHDGSDTY
SDNIIFRMTDGTNEVEFLFPITVVPTDDEPPIINANTGLVLFKNQMMPISSLMLSAADID
SEDSTIKFTLKPPFSTVGQVMLRQSEAPEDPSTWKFNTEDEMYEKVVTEWQQQDITDGKL
FYKHIGPHSTSTVMDQFVFRVQDDNDPPNESGESSFIIKILPIDDLPPELYPGTTLQITV
HEYQLTHFRKKFLRYTDLDSEDRDLKYTIIQPPTDTDENSPVVLGALVLTENPNTEVTTF
TQAQINHHKIAYKPPDLELGITSRVLQFRLTVEDVSRNTAEGVFTIFLKPVNNQPPQITN
SGFTVHERGRHILTLGELDTTDTDTDSTKISFTITQPPLHGHIQFSFTDMTKGDTFGLED
IANGRISYVHNGDESAVDTIQIDISDGVHIVPITIRITVKPIDDETPTINLPAGTIGSYI
DVLENGATEITSNVIQGRDEDTDDLRLTFIVEDKPSLGEILVKGVPSGTFTQADIINGFV
VYSHTSGEIGPNTKEDFFNLTLTDMSDEWTVGGNQITGVRVHVTILPLDSQAPEVFVGPQ
FTVTEGEKNVIQILHISANDVDTPSDDLLCTIIVQPTSGYVENISPAPGSEKSRSGTAIS
AFTIKDIRHNHIYYVQSIHRGVEPVEDRFTFRCSDGINFSERHFFPISIIPSNDEKPEIY
MREFVVMEGMNIVIDTPILNGADADLPSDHLTFFITKPPRYGFILNQLTTGTLPVTNFTL
DQIREGSSIVYEHDDSETTEDSFDIVLTDGKFSVEKKVIVMIIPVDDETPRMAINDGLEI
EIGEVKVISSNVLKATDLDSEDSTLTYIIRYGPGQGYLQRTTPSGMLENITVGMNFTQNE
VDQELIIYIHNGQEGIRDLIKFDVTDGINALIDRYFYVTIGGIDMVFPDVINKGVSLKEG
GRVTLTTDLLSTSDLNSPDEHLVFTITRAPVRGHLECTDTPGVPISSFTQLQLAGNKVYY
IHTADDEMKMDSFEFEVTDGYNPVFRTFRISIIGVDNKKPVVTIHSLTVTEGENKLITPF
ELTVEDRDTIDRLLKFTVTQIPVHGRLLFNNTRPVTSFSKQDLNENLISYKHDGTESKED
SFSFTVTDGTHTDFYIFPDTVFETRKPQAMKITILPVDNGVPQIVVNKGAPTLRVLETGH
IGFVITSKTLKAEDRDSIQDTVTFRITVAPVHGYLINPGRGNATITSFTQAEIDDMNICY
VLRDGDDATNDIFQFSIEDSGGNKLRNQQFRLNWAWISLEKEYYVVDEEVKFLEVVLKRR
GYLGETSFVGIGTKDGTAQKDKDFRGKSQKQVQFNPGQTTATWRVRILSDNEYEVSEAFQ
IVLSEPVMAALEFPEAATVEILDPGDESTVFIPSAVYNIEEDIGELLVPVRRSGDLSQEL
LVVCCTQQVSATGTVPTRVLSYSDYISRPEDHHSILRFEKGEIEKPCRVVIIDDSLYEDE
ESFNVTLSMPMGGRLGSEFPTATIVIIPDMDDDPVFYFDNTEYQVDESEGFVEVQVWRTG
TDLSKGGTVTVRSRKTDPVSAEAGVDYVGISRNLDFAPGVTMQTFRVTILDDLGQPALEG
PEKFELVLRMPMNGILGEPGKTSILINDSVSDLPRVQFRDAVYVGDESSGQISATVYRSG
DISYKSTVRCYSRQGTAQVMMDFTERPNTDASIITFLPGEIEKPCLLVLVDDMEHEEEEE
LRLVLGSPKSESPFGASIGKQNETLIKIKDNADRSIISFGETKFSVNEPKENGQVSVVKI
PVFRVGDTSKVSVVRVHTKDGSAASGEDYHPISEEIVFRQGETEHYVEVEILYDGVREMR
EAFTVHLKPDENMVAETKMSKAIIYIEESDSMADVTFPSVPRVVSLFHYDDVDRTRDSQP
MAGYPVVCITACNPKYPDYDKTGSICVSESINNTLTRYRWLVSAPTGPDGVTSPMREADF
DTFFTSSKLISLDSVYFQAGSRVQCAARAVNSNGDEGLELSSPIVSISADEGMCQPRVAG
TVGAEPFSAKLRYSGAEDTDHPNLIKLTVTMPHIDGMLPVVSTRPLSNFELTLSADGTRV
GQHRCSNLLDYTEVKTRYGFLSEATRNPEVIGETAPYQYSPALRGSSTLRFYRNLNLEAC
LWEFTSYYDMSELLSDCGGTIGTDGQVLNLVQSYVTLRVPLHVSYVFHSPVGAGGWQHLD
LQSELRLTFVYDTAILWRDGIGSPPEAELQGALYPTSMRINDRGQLVVNFRTEARFRGLF
VFAHPASSLTSMVMCPDHPGLTFNLSLVRSEPTYSQPSQQWTFVSDFAVRDYSGMYTVKL
IPCTSPPSLQYNIPPVCNPREPLTFDLDIRFQQVSDPVAAEFSLNTQMMLLSKRTLWLSD
GSMGFGEESDMAFSQGDTVYGRVMVDPVQNLGDSFICNIEKVFLCTGADGYVPKYSPSNF
EFGCLADAPSLLYRFKIIDKAQPETQARSFGNVAFSALLAVDDPGALALVRQPGADGFRM
DSTALFQVAAGREWYIHTIYTVRSRDNANRGIGKRSLEYHAISRYTNPLPEGQHRARRSA
NDVPDVAEEIGAGNNRGTNILHIALDRSSQQKTSPERGVFTQGSVPQELNQRDGDDGLVQ
IIGIFVGLLLTVLLIVVVVLVVHSKQGKKEVPRNSSSTEPMMTQGLGNSDSSEV
NT seq
9345 nt
NT seq
+upstream
nt +downstream
nt
atggcttggattgcgtcctctcacctgcgcggctccggcgctgctttcatcctcttcgcg
ctgattctgacaggtgatgcggtcgcgcagggctttgacagttacggattatcatacgcc
ttgaggtccgagctttcagaggacacgatattggttgccaataatgggatccgcgtgcct
ttcgggagatccgtcttcatcgatcccgtcaacgatttggttatccaagttcagcccggg
gatcgatgcagcatcacagtcctggataatgatcccttgtcacagaggcccggactcctg
tctcccaaaaagtttccgtgtgaatttggccccaacgacgtgaaatattcccacttcggc
tccaggagtcccccgagggacagagtgaggttacaactcaggtatgacacgcaaacggat
acaattattataccgttcatgatggaggtggaggtggttttcacacagctggaggtgctg
accaaaaacatgccacttattgtggagaaactgctcggcacgagtaatcccattgataaa
aggattttagagtttacctacgacaggggcgcacagcagtgcagagtggtctccctctcc
aggggcagcgcgctgcccaggtacggaaaacttgtggatgaggacggactcggcgccatg
ctggactgcgatcaattcattgaaatgaacacccgttatcagcacacttttgctctgaag
tctccaaacagagattacgtccctatgcttgtggaattacacgaccaagagggaaatttg
ctcaagcaggaatttttccagattctggtaagaataaaagatggggaggacaacacgcag
cctaaacccagcttcgttgctatgatgatgatggaagtggaccagtttgtgatgacggca
ataactgtggatatgttggccgcagaggatctggagtctaatcccgacgagttgattttc
aacatcacatcccctctctcctttgaggagggttacatagtcagcacagatgacaggaat
ttaccaataacctcattttatcaaggagacctcaaagaattgaaaatagcatataaaccc
cctgcagtggattcagacactgagcggattttccagattgagtttgaggttgtggacaca
gagggggctgtgtcagacccttttgcttttatgattgttgttaagcccatgaatacactg
gcccccgtggtcacgagaaatactggacagctactgtatgaaggtcagtccaggcctttg
tctagctctgagaacttggaaatcagcgatgaagacaacttagacaaagttcaaatttct
gttattgatgggctgaggcatggagacttaactgttctgggctccacgaggaaatttttc
accccaaccgatctcgatgctggagtagtcatttatcaacacgacggtagtgacacctac
agtgataatattattttcaggatgacagatgggacaaatgaggtggagtttctgtttccc
atcactgttgtgccaacagatgatgagcctcccataatcaatgccaacactgggttggtt
ttatttaaaaaccaaatgatgccaatctcgtcacttatgctcagtgcagctgacatcgac
tctgaggattccacaataaaattcacattaaagcctcccttctcaacagtggggcaggtg
atgctgcgtcagtctgaggcaccggaggacccatcgacttggaagtttaatacagaggat
gaaatgtatgaaaaagttgtgactgaatggcaacagcaggatattactgatgggaagttg
ttctacaagcacatagggccacacagcaccagcacggtcatggaccagtttgtatttcga
gttcaagatgacaacgacccgcctaatgagtcgggagagagctcattcattatcaaaatt
ctccctattgatgatctaccacctgaactgtaccctggcacgaccttgcaaattaccgtg
cacgaataccagctcacccacttccgaaagaaattcctccgttatactgacctcgactca
gaggatcgggatctgaaatacacgatcatccaaccaccaacagacacagatgagaacagc
cctgtagtattgggagctctggtattgaccgaaaacccaaacactgaagtcacgactttc
acgcaagcacaaatcaaccatcataaaatagcctacaagcctcccgacctcgagcttgga
attacttcccgcgttttacagtttaggttaacggttgaagacgtctctaggaatacagca
gagggagtttttactatatttttaaagcctgtgaacaaccagccacctcagataacaaac
tctgggttcactgtgcatgaacgtggcagacacatccttacccttggtgagctggacacc
acagacacagacacagacagcacaaagatttccttcacaatcacgcagcctccgcttcat
ggccacatccagttttcatttactgacatgacaaaaggagacacttttggcttagaggat
attgcaaatggcaggatttcctatgtccataacggggatgaatcagctgtggataccata
caaatagacatcagtgatggggtgcacattgtcccaataactataaggattacagtgaag
cccattgatgatgaaaccccaactattaatctaccagctggcacaataggctcctacata
gatgtactcgaaaatggagctacagaaataacaagtaatgttattcagggtagagatgag
gacaccgatgacctgcgtttgacattcattgttgaagacaagccatcattaggtgagatc
ctggtgaaaggggttccatctggcacattcactcaagctgatatcattaatggctttgtg
gtctattctcataccagcggggagataggcccaaacacaaaggaggattttttcaatctc
actctgacagatatgtctgatgagtggacagtgggaggaaatcaaatcacaggtgtcaga
gtgcacgtgaccatactccccctggacagccaggctccagaggtcttcgtcggtccacag
ttcaccgttactgaaggagagaagaatgtcattcagattcttcatatcagtgctaatgat
gttgacaccccaagtgatgacctcctttgtacaattattgtgcagccaacttcgggatat
gtggaaaatatctcccctgctccaggctcggagaaatcccggtctggaacggcgatcagt
gcttttaccatcaaggacatcaggcataatcacatttactatgttcaaagcattcacaga
ggagtcgagcctgtggaagacaggtttaccttcagatgctctgatggcatcaatttctct
gaaaggcactttttccccatctccataatcccctcaaatgacgaaaagcctgagatttac
atgagagagtttgtggttatggagggcatgaacatagtcattgacactcccattttgaat
ggcgctgatgcagatctcccctcagatcatctcacattcttcattaccaaaccccccagg
tacggatttattttaaatcagctcactaccggcaccctccccgtgaccaacttcaccttg
gatcagatcagagagggctccagtattgtgtatgagcacgatgactcagagaccacagag
gacagctttgatattgttctcacagatggaaagttcagcgtagagaaaaaagtaatagtt
atgatcatccctgtggacgatgaaaccccgcggatggccatcaacgacggccttgaaatt
gagataggtgaggttaaagtaatcagcagtaatgttttaaaagccactgatctggactct
gaagatagcacactgacgtatattattagatacggacctgggcagggatatctgcaaaga
acaacgccatctgggatgttggaaaatatcacagttggcatgaattttacacagaatgaa
gtggatcaggagttgatcatatacatccacaacggccaagaaggaattcgagacctcatc
aaatttgatgtgacagatggcattaatgctttaattgacagatacttttatgtcacaatc
ggtggcattgacatggttttccctgatgtgatcaataaaggagtatctcttaaagaaggt
ggcagagttaccttgacgaccgaccttctcagcaccagtgatcttaacagcccagatgaa
cacttggttttcacaatcacccgcgctccagtgagaggacatctggagtgcacggacaca
cctggggtgcccatctcatcctttacacagctccagctggccggtaacaaagtctattac
atccacactgccgacgatgaaatgaagatggatagctttgaatttgaagtaactgatggc
tacaaccccgtgttccgaaccttccgcatctccatcattggtgtggataataaaaagccc
gtagtgacaatccacagcctgacggtgaccgagggagaaaataaactcatcacgcctttt
gagttaacggttgaggacagagacactattgaccgcctcttgaaattcacagttactcag
attccagttcatggtcgccttctctttaacaacacccggcctgtcacctccttctcaaag
caggatcttaacgagaacctgatcagctacaaacacgatggcaccgagagcaaagaggac
agtttctccttcaccgtcaccgatggcacacacacagacttctacatcttccccgacaca
gtatttgaaactcgaaagccccaggcgatgaagattaccattctgcccgtggataatggg
gtaccacagattgtggtgaacaagggtgccccgactttgcgggttctggagactggtcac
attgggtttgtcatcaccagtaagaccctcaaagcagaggacagagacagcattcaggac
actgtgacttttaggattaccgttgccccggtacatggttacctgatcaacccagggaga
ggaaatgccaccattaccagcttcacacaagctgaaattgacgatatgaacatatgctac
gttctgagggatggtgacgatgccacaaatgacatctttcagttctccattgaggacagt
ggagggaacaaactgaggaaccagcagtttcgtctgaattgggcttggatttccctggaa
aaggaatactatgttgtggatgaggaggtgaagttcctggaggtggtgctgaaacggcgc
ggttacctgggggagacttcgtttgttggtattggcacaaaggatggcacagcacagaag
gacaaagatttccgtgggaagtctcagaaacaggtgcaattcaacccaggccagaccacg
gccacctggagggtccgaatcctgtcagataacgagtacgaagtgtcagaggctttccag
attgttctgtccgagccagtgatggcagctctcgaattcccagaggctgctactgtggag
atcctggaccccggtgacgaatcaacagtgtttataccttcagctgtgtacaacatagag
gaggatatcggagagctgctcgttcccgtacgcaggagtggagacctcagccaagagctc
ttggtcgtatgctgcactcagcaagtttcagccacaggcaccgtccccaccagagtgctg
tcctactctgattacatctccaggcccgaagaccatcacagcatcctgcgcttcgagaag
ggagagatagagaaaccctgccgcgtggtgatcattgatgactccctgtatgaagatgag
gagagcttcaatgtcaccctgagcatgcccatggggggccgtctgggctcagagttcccc
acagccacaatcgtaataattccagatatggatgatgatcccgtcttctacttcgataac
acagaataccaggtggatgagagcgaaggcttcgtggaggtgcaggtgtggaggacgggc
actgatctctccaagggaggaactgtcactgtgcgatccagaaagacagatcctgtctca
gctgaggctggcgtggattatgtggggatcagccggaatctggactttgcaccaggggtc
accatgcaaacatttcgcgtgactatccttgatgatctgggccagccggcccttgagggt
ccagagaagtttgagctggtcctccgcatgcccatgaacggcatcctcggggagcccggc
aagaccagcatcctcatcaacgactccgtttctgacttgccgagggtgcagttccgcgat
gccgtgtatgtgggtgatgagagctcaggacagatctccgccaccgtctaccgtagtggt
gacatcagctacaagtccacggtgcgctgctacagccggcagggcacagcacaagtcatg
atggacttcactgagaggcccaacacagatgcctccatcatcaccttcctgccaggagag
attgagaaaccttgtttgttggtgctggttgatgacatggaacacgaggaggaggaagag
ctgcgtctggtattgggaagccccaagagtgaatctccgtttggagcatctattgggaag
cagaacgaaacgctgatcaaaataaaagataatgcagacaggtcaattattagtttcggg
gagaccaaatttagcgtgaatgagcctaaggaaaatggccaggtctccgtggtgaagatc
cctgtgttccgtgttggagacacttccaaggtgtccgttgtcagagttcacaccaaagat
ggatctgctgcctctggagaggactaccatcccatctctgaggaaattgtgttcagacag
ggtgaaacagagcactacgtggaggtggagattttatatgacggagtcagagaaatgagg
gaggccttcactgtccacctgaagcccgatgagaacatggtggcagaaacaaagatgagc
aaagctatcatctatattgaagagagcgacagcatggcagatgtgacctttccctccgta
ccaagagtggtttctctgtttcattatgacgacgtcgacaggaccagagactctcagccg
atggccggataccccgtcgtttgtatcactgcttgtaaccccaagtatcctgactatgac
aaaaccggctccatctgcgtgagcgagagcatcaacaacacgctgactcgttaccgctgg
ctggtcagcgcccccaccggcccggacggtgtcaccagtcccatgagggaagctgatttc
gacactttcttcacctcctccaaactcatctctctggactcagtgtatttccaggctggc
tccagggtccagtgcgctgcgagggctgtgaactctaacggggatgaaggtctggagctc
agcagccccatcgtgtccatcagcgcagacgagggaatgtgccagcctcgtgtcgccggc
acggtgggggccgagcccttctctgccaagctgcggtacagtggagcagaggatacggac
caccccaacctcatcaaattaaccgtcaccatgcctcacatcgatggaatgctgcctgtg
gtgtccacccgacccctgtctaactttgagctgaccctgagcgctgacgggacccgcgtc
ggccagcatcgctgctccaatttgctggactacaccgaggtcaagacccgctatggtttt
ctgagtgaagccaccagaaacccggaggtgatcggcgagactgcgccataccagtacagc
cccgccctcaggggatccagcacgctgcgcttctacagaaacctcaacctggaggcctgt
ttgtgggaattcaccagctactatgacatgtctgagctgctcagtgactgcggcggcacc
atcgggactgatggacaggtgctgaatctggtccagtcctacgtgaccctgcgagtcccc
ctgcatgtgtcctatgtgttccactcccctgtgggtgcaggagggtggcagcacctggat
ctgcagtcagagctcaggctcacctttgtgtacgacactgccatcttgtggagggatggc
atcggcagcccaccagaggccgagctgcaaggtgccctttacccaaccagcatgcgcata
aatgaccggggacaactagtagtcaactttcgcacagaggctcgattcagaggcttgttt
gtgtttgcacacccagcttcatccctcacatcgatggtcatgtgcccggaccatcctggt
ttaaccttcaatctgtcgctggtgaggagtgaacccacctacagccagcccagccaacag
tggacgttcgtctctgattttgctgtccgggactattctgggatgtacacggtgaagctg
atcccttgcacttcccctccgagcctgcagtacaacatcccccccgtctgcaatcccaga
gagcctctcacattcgacctggatatccgctttcagcaggttagtgatccagtggctgct
gagttcagtctgaacacacagatgatgctgctgtctaaacgcacgctctggctctcagac
ggctcgatgggcttcggagaggagagcgacatggctttctcacaaggagatacagtttat
ggccgggtgatggtggacccggtccaaaacttgggagattcatttatttgcaacatagag
aaagtgttcctttgcactggagcagatggatatgtccctaaatacagccccagcaacttt
gagttcggctgcctggctgatgctccatcactactctaccggttcaagatcattgataaa
gcccagccagagacccaggcccgttcatttggtaacgtagccttcagcgccctcctggct
gtggacgaccccggagctttagctctggtgagacaacctggagcagatggcttcagaatg
gattcaacggctctcttccaggttgctgcagggagagagtggtacatacacaccatctac
actgtccgttcccgggacaacgctaaccgcggcattgggaagagaagtctggaataccac
gcgataagcagatacacaaatcctcttccggagggtcaacaccgcgccagaagatcggcc
aacgacgtgccagacgtagcagaggagatcggagcgggcaacaatcgtggcaccaacatc
ctgcacatcgctctggaccgcagcagccagcagaagaccagtccagagagaggggtcttc
acccaaggcagcgtcccccaggagctcaatcagagggacggcgatgacgggctggtgcag
atcatcggtatctttgtgggattgctcctcacggtgctcctcatcgtcgtggtggtgttg
gtggtgcactccaagcaagggaagaaggaagtacctaggaactccagcagcacagagccc
atgatgacccaaggcctcggcaacagtgacagctcagaggtctaa
DBGET
integrated database retrieval system
